FFCP PHASE1:Hg19::chr11:116701530..116701546,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:116701530..116701546,+ | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_at_chr11:116701530..116701546,+ | |||
|id=chr11:116701530..116701546,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.30e-28!12;CL:0000417!4.30e-28!12;CL:0000668!4.30e-28!12;CL:0000414!4.30e-28!12;CL:0000412!4.30e-28!12;CL:0000182!4.30e-28!12;CL:0000223!2.43e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.77e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.69e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.43e-07;11 | |||
|ontology_enrichment_disease=DOID:178!1.46e-10!1;DOID:326!1.46e-10!1;DOID:3978!1.46e-10!1;DOID:3394!1.46e-10!1;DOID:5844!1.46e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.60e-31!19;UBERON:0006925!2.60e-31!19;UBERON:0008836!2.60e-31!19;UBERON:0008835!6.36e-27!22;UBERON:0003894!6.36e-27!22;UBERON:0009854!1.03e-25!23;UBERON:0007499!1.38e-23!25;UBERON:0009497!1.38e-23!25;UBERON:0000015!1.38e-23!25;UBERON:0002423!1.38e-23!25;UBERON:0006235!1.38e-23!25;UBERON:0004161!1.38e-23!25;UBERON:0005057!1.21e-22!26;UBERON:0009856!1.21e-22!26;UBERON:0002365!7.62e-19!31;UBERON:0002330!7.62e-19!31;UBERON:0002368!1.39e-16!35;UBERON:0003929!2.90e-16!54;UBERON:0000949!1.10e-12!45;UBERON:0004921!3.74e-12!129;UBERON:0004185!3.74e-12!129;UBERON:0002530!6.41e-12!59;UBERON:0005911!3.28e-10!82;UBERON:0005172!3.36e-10!55;UBERON:0005173!3.36e-10!55;UBERON:0001007!9.56e-10!155;UBERON:0001555!9.56e-10!155;UBERON:0007026!9.56e-10!155;UBERON:0002417!4.24e-09!61;UBERON:0000916!4.24e-09!61;UBERON:0004119!9.40e-09!169;UBERON:0000925!9.40e-09!169;UBERON:0006595!9.40e-09!169;UBERON:0000160!2.05e-08!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;6.35e-30;4!UBERON:0002107;4.48e-22;19!UBERON:0006925;4.48e-22;19!UBERON:0002423;8.22e-17;25!UBERON:0000160;7.75e-15;17!UBERON:0002365;1.51e-13;31!UBERON:0002330;1.51e-13;31!UBERON:0002368;9.39e-12;33!UBERON:0005409;1.09e-11;22!UBERON:0001007;5.33e-10;81!UBERON:0000949;1.34e-08;43!UBERON:0004921;5.25e-07;33!UBERON:0002114;9.91e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,6.35e-30,4;UBERON:0002107,4.38e-22,19;UBERON:0006925,4.38e-22,19;UBERON:0008836,4.38e-22,19;UBERON:0008835,4.28e-19,22;UBERON:0003894,4.28e-19,22;UBERON:0009854,2.86e-18,23;UBERON:0007499,8.08e-17,25;UBERON:0009497,8.08e-17,25;UBERON:0000015,8.08e-17,25;UBERON:0002423,8.08e-17,25;UBERON:0006235,8.08e-17,25;UBERON:0004161,8.08e-17,25;UBERON:0009856,3.55e-16,26;UBERON:0000160,7.34e-15,17;UBERON:0002365,1.40e-13,31;UBERON:0002330,1.40e-13,31;UBERON:0002368,4.90e-12,35;UBERON:0003929,5.91e-11,54;UBERON:0004921,1.38e-10,118;UBERON:0005409,2.16e-10,25;UBERON:0000949,2.29e-09,45;UBERON:0001007,1.75e-08,145;UBERON:0001555,1.75e-08,145;UBERON:0007026,1.75e-08,145;UBERON:0005172,8.37e-08,54;UBERON:0005173,8.37e-08,54;UBERON:0004119,1.28e-07,160;UBERON:0000925,1.28e-07,160;UBERON:0006595,1.28e-07,160;UBERON:0002530,3.87e-07,59;UBERON:0005911,3.95e-07,82;UBERON:0002417,5.09e-07,60;UBERON:0000916,5.09e-07,60;UBERON:0002114,9.64e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,4.91413608338813,5.90789906681404,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.35813260568156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21349085126742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.315132729228895,0.0824158583811665,0.337017719270924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.62071615126029,19.8760333368332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2380505851304,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:116701530..116701546,+ | |||
}} |
Latest revision as of 18:28, 23 July 2015
Short description: | p@chr11:116701530..116701546, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116701530..116701546, + |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.69e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 6.35e-30 | 4 |
liver | 4.38e-22 | 19 |
digestive gland | 4.38e-22 | 19 |
liver bud | 4.38e-22 | 19 |
hepatic diverticulum | 4.28e-19 | 22 |
liver primordium | 4.28e-19 | 22 |
digestive tract diverticulum | 2.86e-18 | 23 |
epithelial sac | 8.08e-17 | 25 |
epithelium of foregut-midgut junction | 8.08e-17 | 25 |
anatomical boundary | 8.08e-17 | 25 |
hepatobiliary system | 8.08e-17 | 25 |
foregut-midgut junction | 8.08e-17 | 25 |
septum transversum | 8.08e-17 | 25 |
sac | 3.55e-16 | 26 |
intestine | 7.34e-15 | 17 |
exocrine gland | 1.40e-13 | 31 |
exocrine system | 1.40e-13 | 31 |
endocrine gland | 4.90e-12 | 35 |
gut epithelium | 5.91e-11 | 54 |
subdivision of digestive tract | 1.38e-10 | 118 |
gastrointestinal system | 2.16e-10 | 25 |
endocrine system | 2.29e-09 | 45 |
digestive system | 1.75e-08 | 145 |
digestive tract | 1.75e-08 | 145 |
primitive gut | 1.75e-08 | 145 |
abdomen element | 8.37e-08 | 54 |
abdominal segment element | 8.37e-08 | 54 |
endoderm-derived structure | 1.28e-07 | 160 |
endoderm | 1.28e-07 | 160 |
presumptive endoderm | 1.28e-07 | 160 |
gland | 3.87e-07 | 59 |
endo-epithelium | 3.95e-07 | 82 |
abdominal segment of trunk | 5.09e-07 | 60 |
abdomen | 5.09e-07 | 60 |
duodenum | 9.64e-07 | 2 |