FFCP PHASE1:Hg19::chr10:85931846..85931867,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000514797,uc001kct.2_5end | |association_with_transcript=-14bp_to_ENST00000514797,uc001kct.2_5end | ||
|cluster_id=chr10:85931846..85931867,- | |||
|coexpression_cluster_id=C117 | |coexpression_cluster_id=C117 | ||
|description=CAGE_peak_1_at_ENST00000514797_5end,CAGE_peak_1_at_uc001kct.2_5end | |description=CAGE_peak_1_at_ENST00000514797_5end,CAGE_peak_1_at_uc001kct.2_5end | ||
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|ontology_enrichment_celltype=CL:0000945!3.84e-10!24;CL:0000826!3.84e-10!24;CL:0000817!2.50e-07!3;CL:0000622!3.81e-07!5;CL:0002623!4.79e-07!3 | |ontology_enrichment_celltype=CL:0000945!3.84e-10!24;CL:0000826!3.84e-10!24;CL:0000817!2.50e-07!3;CL:0000622!3.81e-07!5;CL:0002623!4.79e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;9.03e-20;24!CL:0000650;3.23e-16;2!CL:1000500;3.23e-16;2!CL:1000618;3.23e-16;2!CL:1001318;3.23e-16;2!CL:0002173;3.23e-16;2!CL:1000497;4.66e-11;17!CL:0002518;4.66e-11;17!CL:1000746;2.57e-10;7!CL:1000612;2.57e-10;7!CL:0000313;1.60e-09;1!CL:0000946;2.82e-09;1!CL:0000786;2.82e-09;1!CL:0000817;7.85e-09;1!CL:0002252;7.85e-09;1!CL:0000669;1.46e-08;4!CL:0000244;1.98e-08;4!CL:0000731;1.98e-08;4!CL:1000449;2.95e-08;15!CL:1000507;2.29e-07;10!CL:1000494;2.29e-07;10!CL:0000622;5.15e-07;5 | |ontology_enrichment_celltype_v019=CL:0000945;9.03e-20;24!CL:0000650;3.23e-16;2!CL:1000500;3.23e-16;2!CL:1000618;3.23e-16;2!CL:1001318;3.23e-16;2!CL:0002173;3.23e-16;2!CL:1000497;4.66e-11;17!CL:0002518;4.66e-11;17!CL:1000746;2.57e-10;7!CL:1000612;2.57e-10;7!CL:0000313;1.60e-09;1!CL:0000946;2.82e-09;1!CL:0000786;2.82e-09;1!CL:0000817;7.85e-09;1!CL:0002252;7.85e-09;1!CL:0000669;1.46e-08;4!CL:0000244;1.98e-08;4!CL:0000731;1.98e-08;4!CL:1000449;2.95e-08;15!CL:1000507;2.29e-07;10!CL:1000494;2.29e-07;10!CL:0000622;5.15e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.81e-20,24;CL:0000826,8.81e-20,24;CL:0000650,4.76e-16,2;CL:1000500,4.76e-16,2;CL:1000618,4.76e-16,2;CL:1001318,4.76e-16,2;CL:0002173,4.76e-16,2;CL:0000817,3.60e-11,3;CL:1000497,5.54e-11,17;CL:0002518,5.54e-11,17;CL:0000838,7.66e-11,52;CL:0000542,1.30e-10,53;CL:0000051,1.30e-10,53;CL:1000746,3.43e-10,7;CL:1000612,3.43e-10,7;CL:0000313,1.60e-09,1;CL:0000946,3.05e-09,1;CL:0000786,3.05e-09,1;CL:0000980,3.05e-09,1;CL:0002252,8.49e-09,1;CL:0000244,1.46e-08,4;CL:0000731,1.46e-08,4;CL:0000669,1.77e-08,4;CL:1000449,3.45e-08,15;CL:1000507,2.50e-07,10;CL:1000494,2.50e-07,10;CL:0000622,4.56e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;1.60e-09;1!DOID:630;4.19e-09;1!DOID:0050177;4.19e-09;1!DOID:0050427;4.19e-09;1 | |ontology_enrichment_disease_v019=DOID:2152;1.60e-09;1!DOID:630;4.19e-09;1!DOID:0050177;4.19e-09;1!DOID:0050427;4.19e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,1.60e-09,1;DOID:630,3.88e-09,1;DOID:0050177,3.88e-09,1;DOID:0050427,3.88e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.40e-14!115;UBERON:0000489!1.28e-10!32;UBERON:0006554!1.63e-10!44;UBERON:0001008!3.59e-10!45;UBERON:0003887!2.30e-09!21;UBERON:0001049!4.34e-09!57;UBERON:0005068!4.34e-09!57;UBERON:0006241!4.34e-09!57;UBERON:0007135!4.34e-09!57;UBERON:0002113!2.14e-08!27;UBERON:0003918!2.14e-08!27;UBERON:0005095!2.14e-08!27;UBERON:0007687!2.14e-08!27;UBERON:0000080!1.32e-07!18;UBERON:0002120!1.32e-07!18;UBERON:0004875!1.32e-07!18;UBERON:0005721!1.32e-07!18;UBERON:0005754!1.32e-07!18;UBERON:0007297!1.32e-07!18;UBERON:0002780!5.59e-07!41;UBERON:0001890!5.59e-07!41;UBERON:0006240!5.59e-07!41;UBERON:0000153!5.66e-07!129;UBERON:0007811!5.66e-07!129;UBERON:0002616!9.42e-07!59;UBERON:0003080!9.80e-07!42 | |ontology_enrichment_uberon=UBERON:0007023!5.40e-14!115;UBERON:0000489!1.28e-10!32;UBERON:0006554!1.63e-10!44;UBERON:0001008!3.59e-10!45;UBERON:0003887!2.30e-09!21;UBERON:0001049!4.34e-09!57;UBERON:0005068!4.34e-09!57;UBERON:0006241!4.34e-09!57;UBERON:0007135!4.34e-09!57;UBERON:0002113!2.14e-08!27;UBERON:0003918!2.14e-08!27;UBERON:0005095!2.14e-08!27;UBERON:0007687!2.14e-08!27;UBERON:0000080!1.32e-07!18;UBERON:0002120!1.32e-07!18;UBERON:0004875!1.32e-07!18;UBERON:0005721!1.32e-07!18;UBERON:0005754!1.32e-07!18;UBERON:0007297!1.32e-07!18;UBERON:0002780!5.59e-07!41;UBERON:0001890!5.59e-07!41;UBERON:0006240!5.59e-07!41;UBERON:0000153!5.66e-07!129;UBERON:0007811!5.66e-07!129;UBERON:0002616!9.42e-07!59;UBERON:0003080!9.80e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0003567;3.23e-16;2!UBERON:0003838;3.23e-16;2!UBERON:0003586;3.23e-16;2!UBERON:0005169;3.23e-16;2!UBERON:0002321;3.23e-16;2!UBERON:0005215;3.23e-16;2!UBERON:0002303;3.23e-16;2!UBERON:0002319;3.23e-16;2!UBERON:0006554;4.85e-15;30!UBERON:0001008;4.85e-15;30!UBERON:0002113;6.42e-11;24!UBERON:0011143;6.42e-11;24!UBERON:0000074;2.57e-10;7!UBERON:0001229;2.57e-10;7!UBERON:0004911;1.60e-09;1!UBERON:0005795;4.19e-09;1!UBERON:0000489;5.92e-09;29!UBERON:0001301;7.85e-09;1!UBERON:0003891;1.46e-08;4!UBERON:0006555;2.95e-08;15!UBERON:0004819;2.95e-08;15!UBERON:0001285;2.95e-08;15!UBERON:0007684;2.95e-08;15!UBERON:0004211;2.29e-07;10!UBERON:0009773;2.29e-07;10!UBERON:0001231;2.29e-07;10!UBERON:0004810;2.29e-07;10!UBERON:0000365;6.56e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0003567;3.23e-16;2!UBERON:0003838;3.23e-16;2!UBERON:0003586;3.23e-16;2!UBERON:0005169;3.23e-16;2!UBERON:0002321;3.23e-16;2!UBERON:0005215;3.23e-16;2!UBERON:0002303;3.23e-16;2!UBERON:0002319;3.23e-16;2!UBERON:0006554;4.85e-15;30!UBERON:0001008;4.85e-15;30!UBERON:0002113;6.42e-11;24!UBERON:0011143;6.42e-11;24!UBERON:0000074;2.57e-10;7!UBERON:0001229;2.57e-10;7!UBERON:0004911;1.60e-09;1!UBERON:0005795;4.19e-09;1!UBERON:0000489;5.92e-09;29!UBERON:0001301;7.85e-09;1!UBERON:0003891;1.46e-08;4!UBERON:0006555;2.95e-08;15!UBERON:0004819;2.95e-08;15!UBERON:0001285;2.95e-08;15!UBERON:0007684;2.95e-08;15!UBERON:0004211;2.29e-07;10!UBERON:0009773;2.29e-07;10!UBERON:0001231;2.29e-07;10!UBERON:0004810;2.29e-07;10!UBERON:0000365;6.56e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,4.76e-16,2;UBERON:0003838,4.76e-16,2;UBERON:0003586,4.76e-16,2;UBERON:0005169,4.76e-16,2;UBERON:0002321,4.76e-16,2;UBERON:0005215,4.76e-16,2;UBERON:0002303,4.76e-16,2;UBERON:0002319,4.76e-16,2;UBERON:0003887,1.26e-15,12;UBERON:0005103,3.54e-15,8;UBERON:0000083,3.54e-15,8;UBERON:0009201,3.54e-15,8;UBERON:0006553,3.54e-15,8;UBERON:0003074,3.54e-15,8;UBERON:0003060,3.54e-15,8;UBERON:0000080,1.62e-13,9;UBERON:0002120,1.62e-13,9;UBERON:0004875,1.62e-13,9;UBERON:0005721,1.62e-13,9;UBERON:0005754,1.62e-13,9;UBERON:0007297,1.62e-13,9;UBERON:0002113,2.23e-13,26;UBERON:0003918,2.23e-13,26;UBERON:0011143,2.23e-13,26;UBERON:0005095,2.23e-13,26;UBERON:0007687,2.23e-13,26;UBERON:0006554,1.28e-11,47;UBERON:0006555,1.44e-11,16;UBERON:0004819,1.44e-11,16;UBERON:0001008,2.38e-11,48;UBERON:0000489,4.23e-11,31;UBERON:0004876,4.27e-11,11;UBERON:0010532,3.43e-10,7;UBERON:0000074,3.43e-10,7;UBERON:0001229,3.43e-10,7;UBERON:0001230,3.43e-10,7;UBERON:0003220,3.43e-10,7;UBERON:0005749,3.43e-10,7;UBERON:0004199,3.43e-10,7;UBERON:0004209,3.43e-10,7;UBERON:0004198,3.43e-10,7;UBERON:0004911,1.60e-09,1;UBERON:0001301,7.85e-09,1;UBERON:0003891,1.77e-08,4;UBERON:0004211,3.45e-08,15;UBERON:0009773,3.45e-08,15;UBERON:0001231,3.45e-08,15;UBERON:0001285,3.45e-08,15;UBERON:0007684,3.45e-08,15;UBERON:0004208,3.45e-08,15;UBERON:0005172,6.86e-08,54;UBERON:0005173,6.86e-08,54;UBERON:0004810,2.50e-07,10;UBERON:0000365,5.15e-07,5;UBERON:0002417,5.37e-07,60;UBERON:0000916,5.37e-07,60 | |||
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|short_description=p1@ENST00000514797,p1@uc001kct.2 | |short_description=p1@ENST00000514797,p1@uc001kct.2 | ||
}} | }} |
Latest revision as of 16:14, 23 July 2015
Short description: | p1@ENST00000514797, p1@uc001kct.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000514797_5end, CAGE_peak_1_at_uc001kct.2_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | -14bp_to_ENST00000514797, uc001kct.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.81e-20 | 24 |
pro-B cell | 8.81e-20 | 24 |
mesangial cell | 4.76e-16 | 2 |
kidney interstitial cell | 4.76e-16 | 2 |
juxtaglomerular complex cell | 4.76e-16 | 2 |
renal interstitial pericyte | 4.76e-16 | 2 |
extraglomerular mesangial cell | 4.76e-16 | 2 |
precursor B cell | 3.60e-11 | 3 |
kidney cell | 5.54e-11 | 17 |
kidney epithelial cell | 5.54e-11 | 17 |
lymphoid lineage restricted progenitor cell | 7.66e-11 | 52 |
lymphocyte | 1.30e-10 | 53 |
common lymphoid progenitor | 1.30e-10 | 53 |
glomerular cell | 3.43e-10 | 7 |
kidney corpuscule cell | 3.43e-10 | 7 |
serous secreting cell | 1.60e-09 | 1 |
antibody secreting cell | 3.05e-09 | 1 |
plasma cell | 3.05e-09 | 1 |
plasmablast | 3.05e-09 | 1 |
epithelial cell of esophagus | 8.49e-09 | 1 |
transitional epithelial cell | 1.46e-08 | 4 |
urothelial cell | 1.46e-08 | 4 |
pericyte cell | 1.77e-08 | 4 |
epithelial cell of nephron | 3.45e-08 | 15 |
kidney tubule cell | 2.50e-07 | 10 |
nephron tubule epithelial cell | 2.50e-07 | 10 |
acinar cell | 4.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.60e-09 | 1 |
genetic disease | 3.88e-09 | 1 |
monogenic disease | 3.88e-09 | 1 |
xeroderma pigmentosum | 3.88e-09 | 1 |