FFCP PHASE1:Hg19::chr10:5652705..5652732,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000425246_5end | |association_with_transcript=23bp_to_ENST00000425246_5end | ||
|cluster_id=chr10:5652705..5652732,- | |||
|description=CAGE_peak_1_at_ENST00000425246_5end | |description=CAGE_peak_1_at_ENST00000425246_5end | ||
|id=chr10:5652705..5652732,- | |id=chr10:5652705..5652732,- | ||
|ontology_enrichment_celltype=CL:0000223!2.92e-27!59;CL:0002076!1.10e-23!43;CL:0000066!5.14e-19!254;CL:0002251!1.97e-11!21;CL:0002368!2.74e-10!13;CL:0000244!1.31e-08!4;CL:0000731!1.31e-08!4;CL:0002621!5.49e-07!3 | |ontology_enrichment_celltype=CL:0000223!2.92e-27!59;CL:0002076!1.10e-23!43;CL:0000066!5.14e-19!254;CL:0002251!1.97e-11!21;CL:0002368!2.74e-10!13;CL:0000244!1.31e-08!4;CL:0000731!1.31e-08!4;CL:0002621!5.49e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000244;2.19e-20;4!CL:0000731;2.19e-20;4!CL:0002621;5.25e-16;3!CL:0002076;9.68e-08;42 | |ontology_enrichment_celltype_v019=CL:0000244;2.19e-20;4!CL:0000731;2.19e-20;4!CL:0002621;5.25e-16;3!CL:0002076;9.68e-08;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.38e-20,4;CL:0000731,2.38e-20,4;CL:0002621,4.88e-16,3;CL:0000223,1.97e-08,58;CL:0002076,3.23e-08,42;CL:0000066,8.35e-08,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!4.76e-14!106;DOID:1749!1.14e-08!14;DOID:0050687!1.95e-08!143 | |ontology_enrichment_disease=DOID:305!4.76e-14!106;DOID:1749!1.14e-08!14;DOID:0050687!1.95e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:4929;2.03e-11;2 | |ontology_enrichment_disease_v019=DOID:4929;2.03e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4929,1.31e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.35e-29!169;UBERON:0000925!1.35e-29!169;UBERON:0006595!1.35e-29!169;UBERON:0001007!1.47e-22!155;UBERON:0001555!1.47e-22!155;UBERON:0007026!1.47e-22!155;UBERON:0004921!4.59e-20!129;UBERON:0004185!4.59e-20!129;UBERON:0005911!3.41e-18!82;UBERON:0000077!1.53e-13!130;UBERON:0003929!4.69e-11!54;UBERON:0005910!7.20e-11!6;UBERON:0001004!9.25e-11!72;UBERON:0000161!9.33e-11!35;UBERON:0001041!6.32e-10!98;UBERON:0000365!7.86e-10!5;UBERON:0000160!1.16e-08!27;UBERON:0000166!2.68e-08!21;UBERON:0005409!3.41e-08!35;UBERON:0000481!1.14e-07!347;UBERON:0005153!1.32e-07!37;UBERON:0002365!2.71e-07!31;UBERON:0002330!2.71e-07!31;UBERON:0009497!2.81e-07!25;UBERON:0000015!2.81e-07!25;UBERON:0002423!2.81e-07!25;UBERON:0006235!2.81e-07!25;UBERON:0004161!2.81e-07!25;UBERON:0001949!5.49e-07!3;UBERON:0009856!6.64e-07!26;UBERON:0003104!7.95e-07!238;UBERON:0009142!7.95e-07!238;UBERON:0002294!8.20e-07!7;UBERON:0001173!8.20e-07!7;UBERON:0004912!8.20e-07!7 | |ontology_enrichment_uberon=UBERON:0004119!1.35e-29!169;UBERON:0000925!1.35e-29!169;UBERON:0006595!1.35e-29!169;UBERON:0001007!1.47e-22!155;UBERON:0001555!1.47e-22!155;UBERON:0007026!1.47e-22!155;UBERON:0004921!4.59e-20!129;UBERON:0004185!4.59e-20!129;UBERON:0005911!3.41e-18!82;UBERON:0000077!1.53e-13!130;UBERON:0003929!4.69e-11!54;UBERON:0005910!7.20e-11!6;UBERON:0001004!9.25e-11!72;UBERON:0000161!9.33e-11!35;UBERON:0001041!6.32e-10!98;UBERON:0000365!7.86e-10!5;UBERON:0000160!1.16e-08!27;UBERON:0000166!2.68e-08!21;UBERON:0005409!3.41e-08!35;UBERON:0000481!1.14e-07!347;UBERON:0005153!1.32e-07!37;UBERON:0002365!2.71e-07!31;UBERON:0002330!2.71e-07!31;UBERON:0009497!2.81e-07!25;UBERON:0000015!2.81e-07!25;UBERON:0002423!2.81e-07!25;UBERON:0006235!2.81e-07!25;UBERON:0004161!2.81e-07!25;UBERON:0001949!5.49e-07!3;UBERON:0009856!6.64e-07!26;UBERON:0003104!7.95e-07!238;UBERON:0009142!7.95e-07!238;UBERON:0002294!8.20e-07!7;UBERON:0001173!8.20e-07!7;UBERON:0004912!8.20e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;7.79e-20;12!UBERON:0000160;3.54e-17;17!UBERON:0002108;6.98e-17;4!UBERON:0005409;1.48e-16;22!UBERON:0000365;2.40e-16;5!UBERON:0001949;5.25e-16;3!UBERON:0005910;1.20e-13;6!UBERON:0004921;1.17e-09;33!UBERON:0005911;1.23e-09;36!UBERON:0001555;1.36e-08;54!UBERON:0000058;2.17e-08;10!UBERON:0002114;6.90e-08;2!UBERON:0000059;1.16e-07;11!UBERON:0004807;1.17e-07;22!UBERON:0002294;3.10e-07;7!UBERON:0001173;3.10e-07;7!UBERON:0003929;4.04e-07;7!UBERON:0004913;7.47e-07;1!UBERON:0003703;7.47e-07;1!UBERON:0001174;7.47e-07;1!UBERON:0004914;7.47e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000486;7.79e-20;12!UBERON:0000160;3.54e-17;17!UBERON:0002108;6.98e-17;4!UBERON:0005409;1.48e-16;22!UBERON:0000365;2.40e-16;5!UBERON:0001949;5.25e-16;3!UBERON:0005910;1.20e-13;6!UBERON:0004921;1.17e-09;33!UBERON:0005911;1.23e-09;36!UBERON:0001555;1.36e-08;54!UBERON:0000058;2.17e-08;10!UBERON:0002114;6.90e-08;2!UBERON:0000059;1.16e-07;11!UBERON:0004807;1.17e-07;22!UBERON:0002294;3.10e-07;7!UBERON:0001173;3.10e-07;7!UBERON:0003929;4.04e-07;7!UBERON:0004913;7.47e-07;1!UBERON:0003703;7.47e-07;1!UBERON:0001174;7.47e-07;1!UBERON:0004914;7.47e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.93e-17,17;UBERON:0004119,5.08e-17,160;UBERON:0000925,5.08e-17,160;UBERON:0006595,5.08e-17,160;UBERON:0002108,1.24e-16,4;UBERON:0000365,2.56e-16,5;UBERON:0001949,4.88e-16,3;UBERON:0005409,1.86e-14,25;UBERON:0005910,1.26e-13,6;UBERON:0005911,3.18e-12,82;UBERON:0001007,7.76e-12,145;UBERON:0001555,7.76e-12,145;UBERON:0007026,7.76e-12,145;UBERON:0004921,1.54e-08,118;UBERON:0002114,9.55e-08,2;UBERON:0000059,9.82e-08,11;UBERON:0004913,7.49e-07,1;UBERON:0003703,7.49e-07,1;UBERON:0001174,7.49e-07,1;UBERON:0004914,7.49e-07,1 | |||
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|short_description=p1@ENST00000425246 | |short_description=p1@ENST00000425246 | ||
}} | }} |
Latest revision as of 14:13, 23 July 2015
Short description: | p1@ENST00000425246 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000425246_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000425246_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.38e-20 | 4 |
urothelial cell | 2.38e-20 | 4 |
gingival epithelial cell | 4.88e-16 | 3 |
endodermal cell | 1.97e-08 | 58 |
endo-epithelial cell | 3.23e-08 | 42 |
epithelial cell | 8.35e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.93e-17 | 17 |
endoderm-derived structure | 5.08e-17 | 160 |
endoderm | 5.08e-17 | 160 |
presumptive endoderm | 5.08e-17 | 160 |
small intestine | 1.24e-16 | 4 |
urothelium | 2.56e-16 | 5 |
gingival epithelium | 4.88e-16 | 3 |
gastrointestinal system | 1.86e-14 | 25 |
transitional epithelium | 1.26e-13 | 6 |
endo-epithelium | 3.18e-12 | 82 |
digestive system | 7.76e-12 | 145 |
digestive tract | 7.76e-12 | 145 |
primitive gut | 7.76e-12 | 145 |
subdivision of digestive tract | 1.54e-08 | 118 |
duodenum | 9.55e-08 | 2 |
large intestine | 9.82e-08 | 11 |
hepatopancreatic ampulla | 7.49e-07 | 1 |
extrahepatic bile duct | 7.49e-07 | 1 |
common bile duct | 7.49e-07 | 1 |
duodenal papilla | 7.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.31e-11 | 2 |