FFCP PHASE1:Hg19::chr10:19337787..19337796,+: Difference between revisions
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|id=chr10:19337787..19337796,+
|short_description=p@chr10:19337787..19337796,+
|description=CAGE_peak_at_chr10:19337787..19337796,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:19337787..19337796,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr10:19337787..19337796,+ | |||
|id=chr10:19337787..19337796,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.46e-21!4;CL:0002253!4.52e-11!2;CL:0002231!5.93e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002231;1.41e-09;3!CL:0002563;1.49e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.41e-09,3;CL:0002563,1.40e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.87e-45!27;UBERON:0001052!2.54e-44!4;UBERON:0004907!1.21e-35!5;UBERON:0005409!8.98e-35!35;UBERON:0000059!7.55e-29!11;UBERON:0001242!9.46e-21!4;UBERON:0001262!9.46e-21!4;UBERON:0004786!9.46e-21!4;UBERON:0004808!9.46e-21!4;UBERON:0001277!9.46e-21!4;UBERON:0001046!6.74e-17!19;UBERON:0003350!8.14e-17!5;UBERON:0002108!1.15e-12!14;UBERON:0004921!6.00e-12!129;UBERON:0004185!6.00e-12!129;UBERON:0001007!7.06e-10!155;UBERON:0001555!7.06e-10!155;UBERON:0007026!7.06e-10!155;UBERON:0000485!8.84e-10!9;UBERON:0001155!9.65e-10!9;UBERON:0004119!5.07e-09!169;UBERON:0000925!5.07e-09!169;UBERON:0006595!5.07e-09!169;UBERON:0000344!1.47e-07!12;UBERON:0000060!1.47e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.36e-49;17!UBERON:0002108;4.03e-45;4!UBERON:0005409;1.03e-38;22!UBERON:0004921;2.06e-21;33!UBERON:0000059;5.79e-10;11!UBERON:0001555;9.99e-10;54!UBERON:0002114;1.67e-09;2!UBERON:0001242;1.49e-07;4!UBERON:0001262;1.49e-07;4!UBERON:0004786;1.49e-07;4!UBERON:0004808;1.49e-07;4!UBERON:0001277;1.49e-07;4!UBERON:0001052;2.04e-07;4!UBERON:0001007;2.42e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.36e-49,17;UBERON:0002108,4.03e-45,4;UBERON:0005409,2.74e-34,25;UBERON:0004921,3.14e-10,118;UBERON:0000059,6.06e-10,11;UBERON:0002114,1.67e-09,2;UBERON:0001007,2.52e-08,145;UBERON:0001555,2.52e-08,145;UBERON:0007026,2.52e-08,145;UBERON:0001242,1.40e-07,4;UBERON:0001262,1.40e-07,4;UBERON:0004786,1.40e-07,4;UBERON:0004808,1.40e-07,4;UBERON:0001277,1.40e-07,4;UBERON:0004119,1.54e-07,160;UBERON:0000925,1.54e-07,160;UBERON:0006595,1.54e-07,160;UBERON:0001052,2.04e-07,4;UBERON:0011216,6.23e-07,223 | |||
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|short_description=p@chr10:19337787..19337796,+ | |||
}} | }} |
Latest revision as of 12:26, 23 July 2015
Short description: | p@chr10:19337787..19337796, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:19337787..19337796, + |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.41e-09 | 3 |
intestinal epithelial cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.36e-49 | 17 |
small intestine | 4.03e-45 | 4 |
gastrointestinal system | 2.74e-34 | 25 |
subdivision of digestive tract | 3.14e-10 | 118 |
large intestine | 6.06e-10 | 11 |
duodenum | 1.67e-09 | 2 |
digestive system | 2.52e-08 | 145 |
digestive tract | 2.52e-08 | 145 |
primitive gut | 2.52e-08 | 145 |
intestinal mucosa | 1.40e-07 | 4 |
wall of intestine | 1.40e-07 | 4 |
gastrointestinal system mucosa | 1.40e-07 | 4 |
gastrointestinal system epithelium | 1.40e-07 | 4 |
intestinal epithelium | 1.40e-07 | 4 |
endoderm-derived structure | 1.54e-07 | 160 |
endoderm | 1.54e-07 | 160 |
presumptive endoderm | 1.54e-07 | 160 |
rectum | 2.04e-07 | 4 |
organ system subdivision | 6.23e-07 | 223 |