FFCP PHASE1:Hg19::chr10:105819927..105819974,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105819927..105819974,+ | |||
|coexpression_cluster_id=C640 | |||
|description=CAGE_peak_at_chr10:105819927..105819974,+ | |description=CAGE_peak_at_chr10:105819927..105819974,+ | ||
|id=chr10:105819927..105819974,+ | |id=chr10:105819927..105819974,+ | ||
|ontology_enrichment_celltype=CL:0002076!6.05e-33!43;CL:0000223!4.49e-25!59;CL:0002251!1.68e-21!21;CL:0000066!3.11e-21!254;CL:0002368!3.37e-17!13;CL:0002202!2.48e-10!9;CL:0002632!2.48e-10!9;CL:0002159!7.25e-10!13;CL:0000244!1.92e-09!4;CL:0000731!1.92e-09!4;CL:0000076!4.26e-08!62;CL:0002621!1.15e-07!3;CL:0002541!1.26e-07!3;CL:0000349!1.34e-07!3;CL:0002577!1.34e-07!3;CL:0002623!1.89e-07!3;CL:0000622!2.39e-07!5;CL:0002328!5.27e-07!3;CL:0000068!9.69e-07!3;CL:0000069!9.69e-07!3;CL:0000307!9.69e-07!3;CL:0000377!9.69e-07!3 | |ontology_enrichment_celltype=CL:0002076!6.05e-33!43;CL:0000223!4.49e-25!59;CL:0002251!1.68e-21!21;CL:0000066!3.11e-21!254;CL:0002368!3.37e-17!13;CL:0002202!2.48e-10!9;CL:0002632!2.48e-10!9;CL:0002159!7.25e-10!13;CL:0000244!1.92e-09!4;CL:0000731!1.92e-09!4;CL:0000076!4.26e-08!62;CL:0002621!1.15e-07!3;CL:0002541!1.26e-07!3;CL:0000349!1.34e-07!3;CL:0002577!1.34e-07!3;CL:0002623!1.89e-07!3;CL:0000622!2.39e-07!5;CL:0002328!5.27e-07!3;CL:0000068!9.69e-07!3;CL:0000069!9.69e-07!3;CL:0000307!9.69e-07!3;CL:0000377!9.69e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.88e-24;42!CL:0000349;9.11e-20;19!CL:0002368;2.64e-18;13!CL:0002251;6.67e-18;20!CL:0002159;3.49e-14;14!CL:0000244;6.63e-14;4!CL:0000731;6.63e-14;4!CL:0002202;5.30e-12;9!CL:0002632;5.30e-12;9!CL:0002621;3.73e-11;3!CL:0002541;3.79e-11;3!CL:0002577;4.72e-11;3!CL:0002623;8.08e-11;3!CL:0000622;8.61e-11;5!CL:0002328;4.09e-10;3!CL:0000307;6.60e-10;3!CL:0000240;1.37e-09;6!CL:0000311;1.37e-09;6!CL:0000079;1.37e-09;6!CL:0000237;1.37e-09;6!CL:0000154;5.35e-09;6!CL:0002327;1.38e-08;4!CL:0000575;7.96e-08;2!CL:0002536;1.43e-07;2!CL:0002537;5.89e-07;5!CL:0002077;7.23e-07;34!CL:0000312;8.17e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.37e-32,42;CL:0000223,1.21e-21,58;CL:0000066,2.58e-21,253;CL:0000349,9.48e-20,19;CL:0002368,3.69e-18,13;CL:0002251,5.92e-18,20;CL:0002159,2.92e-14,14;CL:0000244,6.11e-14,4;CL:0000731,6.11e-14,4;CL:0002202,7.07e-12,9;CL:0002632,7.07e-12,9;CL:0002621,3.73e-11,3;CL:0002541,4.27e-11,3;CL:0002577,4.73e-11,3;CL:0000622,6.91e-11,5;CL:0002623,8.09e-11,3;CL:0002328,4.03e-10,3;CL:0000068,1.04e-09,3;CL:0000069,1.04e-09,3;CL:0000307,1.04e-09,3;CL:0000377,1.04e-09,3;CL:0000240,1.48e-09,6;CL:0000311,1.48e-09,6;CL:0000079,1.48e-09,6;CL:0000237,1.48e-09,6;CL:0000036,1.48e-09,6;CL:0000357,1.48e-09,6;CL:0000114,1.48e-09,6;CL:0000154,4.46e-09,6;CL:0002327,1.30e-08,4;CL:0000076,4.88e-08,63;CL:0002077,5.78e-08,34;CL:0000575,7.19e-08,2;CL:0002536,1.66e-07,2;CL:0002537,5.22e-07,5;CL:0000312,8.59e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;7.87e-11;58!CL:0000377;6.60e-10;3!CL:0000357;1.37e-09;6!CL:0000114;1.37e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!3.35e-21!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.99e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.37e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.43e-21!14;UBERON:0000158!6.43e-21!14;UBERON:0004119!7.14e-21!169;UBERON:0000925!7.14e-21!169;UBERON:0006595!7.14e-21!169;UBERON:0000166!3.09e-16!21;UBERON:0001004!1.31e-15!72;UBERON:0003124!4.14e-15!7;UBERON:0000165!3.06e-13!28;UBERON:0000930!3.06e-13!28;UBERON:0000161!7.53e-13!35;UBERON:0001007!1.75e-11!155;UBERON:0001555!1.75e-11!155;UBERON:0007026!1.75e-11!155;UBERON:0000478!7.55e-11!24;UBERON:0003729!2.73e-10!5;UBERON:0000077!1.12e-09!130;UBERON:0004921!2.31e-09!129;UBERON:0004185!2.31e-09!129;UBERON:0001987!3.69e-09!4;UBERON:0004340!3.69e-09!4;UBERON:0000065!1.68e-08!53;UBERON:0001444!2.19e-08!48;UBERON:0003343!3.10e-08!4;UBERON:0004785!3.10e-08!4;UBERON:0000305!4.43e-08!7;UBERON:0007196!6.83e-08!14;UBERON:0001558!6.83e-08!14;UBERON:0001041!6.99e-08!98;UBERON:0001949!1.15e-07!3;UBERON:0000476!1.26e-07!3;UBERON:0000920!1.26e-07!3;UBERON:0004923!1.31e-07!57;UBERON:0000365!1.61e-07!5;UBERON:0003102!3.15e-07!95;UBERON:0004815!5.27e-07!3;UBERON:0002031!5.27e-07!3;UBERON:0004871!5.36e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.12e-21;10!UBERON:0000158;5.12e-21;10!UBERON:0000478;3.96e-15;24!UBERON:0000486;3.75e-13;12!UBERON:0000305;3.34e-12;7!UBERON:0000165;5.01e-12;28!UBERON:0001949;3.73e-11;3!UBERON:0003124;3.79e-11;3!UBERON:0000920;3.79e-11;3!UBERON:0000365;3.94e-11;5!UBERON:0004815;4.09e-10;3!UBERON:0002031;4.09e-10;3!UBERON:0000161;4.96e-10;19!UBERON:0000166;4.96e-10;19!UBERON:0005910;2.81e-09;6!UBERON:0003729;8.16e-09;13!UBERON:0001911;1.38e-08;4!UBERON:0001987;2.20e-08;4!UBERON:0005911;2.89e-07;36!UBERON:0007196;5.97e-07;15!UBERON:0001558;5.97e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.05e-27,14;UBERON:0000158,1.05e-27,14;UBERON:0003124,2.13e-17,7;UBERON:0000478,4.08e-15,24;UBERON:0000166,6.01e-13,22;UBERON:0004119,1.07e-12,160;UBERON:0000925,1.07e-12,160;UBERON:0006595,1.07e-12,160;UBERON:0001004,2.81e-12,74;UBERON:0000305,3.23e-12,7;UBERON:0000165,1.74e-11,29;UBERON:0000930,1.74e-11,29;UBERON:0000365,3.69e-11,5;UBERON:0001949,3.73e-11,3;UBERON:0000920,4.27e-11,3;UBERON:0004923,9.45e-11,66;UBERON:0003102,9.61e-11,99;UBERON:0004871,1.21e-10,8;UBERON:0000161,1.35e-10,36;UBERON:0004815,4.03e-10,3;UBERON:0002031,4.03e-10,3;UBERON:0000033,8.91e-10,56;UBERON:0005910,2.66e-09,6;UBERON:0003729,8.41e-09,13;UBERON:0001911,1.30e-08,4;UBERON:0005333,1.30e-08,4;UBERON:0008425,1.30e-08,4;UBERON:0005311,1.30e-08,4;UBERON:0001444,1.63e-08,49;UBERON:0000153,1.67e-08,62;UBERON:0007811,1.67e-08,62;UBERON:0001987,2.20e-08,4;UBERON:0004340,2.20e-08,4;UBERON:0007196,7.03e-07,15;UBERON:0001558,7.03e-07,15 | |||
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| ||
|short_description=p@chr10:105819927..105819974,+ | |short_description=p@chr10:105819927..105819974,+ | ||
}} | }} |
Latest revision as of 10:04, 23 July 2015
Short description: | p@chr10:105819927..105819974, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105819927..105819974, + |
Coexpression cluster: | C640_amniotic_salivary_chorionic_Keratinocyte_Urothelial_Prostate_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.05e-27 | 14 |
membranous layer | 1.05e-27 | 14 |
chorion | 2.13e-17 | 7 |
extraembryonic structure | 4.08e-15 | 24 |
oral opening | 6.01e-13 | 22 |
endoderm-derived structure | 1.07e-12 | 160 |
endoderm | 1.07e-12 | 160 |
presumptive endoderm | 1.07e-12 | 160 |
respiratory system | 2.81e-12 | 74 |
amnion | 3.23e-12 | 7 |
mouth | 1.74e-11 | 29 |
stomodeum | 1.74e-11 | 29 |
urothelium | 3.69e-11 | 5 |
gingival epithelium | 3.73e-11 | 3 |
egg chorion | 4.27e-11 | 3 |
organ component layer | 9.45e-11 | 66 |
surface structure | 9.61e-11 | 99 |
somatic layer of lateral plate mesoderm | 1.21e-10 | 8 |
orifice | 1.35e-10 | 36 |
lower respiratory tract epithelium | 4.03e-10 | 3 |
epithelium of bronchus | 4.03e-10 | 3 |
head | 8.91e-10 | 56 |
transitional epithelium | 2.66e-09 | 6 |
mouth mucosa | 8.41e-09 | 13 |
mammary gland | 1.30e-08 | 4 |
mammary bud | 1.30e-08 | 4 |
mammary ridge | 1.30e-08 | 4 |
mammary placode | 1.30e-08 | 4 |
subdivision of head | 1.63e-08 | 49 |
anterior region of body | 1.67e-08 | 62 |
craniocervical region | 1.67e-08 | 62 |
placenta | 2.20e-08 | 4 |
allantois | 2.20e-08 | 4 |
tracheobronchial tree | 7.03e-07 | 15 |
lower respiratory tract | 7.03e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.37e-13 | 14 |