FFCP PHASE1:Hg19::chr5:176057494..176057517,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6620 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11140 | |||
|TSSclassifier=strong | |||
|UniProt=Q16143 | |||
|association_with_transcript=12bp_to_ENST00000393693_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_SNCB_5end | |||
|id=chr5:176057494..176057517,- | |||
|ontology_enrichment_celltype=CL:0002319!1.75e-07!25;CL:0000540!4.26e-07!6;CL:0000031!4.26e-07!6;CL:0000404!4.26e-07!6;CL:0000047!7.51e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.46e-10;5!CL:0000540;6.97e-09;6!CL:0000404;6.97e-09;6!CL:0002144;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.46e-10,5;CL:0000047,2.68e-09,8;CL:0000540,6.38e-09,6;CL:0000031,6.38e-09,6;CL:0000404,6.38e-09,6;CL:0002144,8.75e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.76e-16;82!CL:0000031;6.97e-09;6!UBERON:0006215;2.23e-08;3!UBERON:0006241;3.60e-07;3!UBERON:0003057;3.60e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.92e-54!82;UBERON:0005743!2.72e-54!86;UBERON:0000073!2.33e-53!94;UBERON:0001016!2.33e-53!94;UBERON:0001049!7.74e-52!57;UBERON:0005068!7.74e-52!57;UBERON:0006241!7.74e-52!57;UBERON:0007135!7.74e-52!57;UBERON:0000955!2.52e-43!69;UBERON:0006238!2.52e-43!69;UBERON:0002616!6.30e-43!59;UBERON:0003075!9.79e-42!86;UBERON:0007284!9.79e-42!86;UBERON:0002780!2.13e-39!41;UBERON:0001890!2.13e-39!41;UBERON:0006240!2.13e-39!41;UBERON:0002346!8.00e-39!90;UBERON:0003080!4.23e-38!42;UBERON:0001893!3.05e-32!34;UBERON:0002020!4.14e-32!34;UBERON:0003528!4.14e-32!34;UBERON:0002791!5.31e-31!33;UBERON:0001869!1.58e-30!32;UBERON:0004121!3.95e-30!169;UBERON:0000924!9.18e-29!173;UBERON:0006601!9.18e-29!173;UBERON:0003056!9.41e-29!61;UBERON:0002619!2.02e-25!22;UBERON:0007023!8.49e-24!115;UBERON:0001950!3.38e-23!20;UBERON:0000956!4.51e-23!25;UBERON:0000203!4.51e-23!25;UBERON:0000033!1.09e-22!123;UBERON:0000153!2.16e-21!129;UBERON:0007811!2.16e-21!129;UBERON:0000025!1.22e-16!194;UBERON:0003076!2.17e-14!15;UBERON:0003057!2.17e-14!15;UBERON:0000119!1.46e-12!312;UBERON:0004111!2.77e-12!241;UBERON:0000483!5.79e-12!309;UBERON:0004733!1.62e-11!12;UBERON:0002028!1.62e-11!12;UBERON:0007277!1.62e-11!12;UBERON:0002420!1.25e-10!9;UBERON:0007245!1.25e-10!9;UBERON:0010009!1.25e-10!9;UBERON:0010011!1.25e-10!9;UBERON:0000454!1.25e-10!9;UBERON:0002308!1.84e-10!9;UBERON:0000125!1.84e-10!9;UBERON:0004732!2.36e-10!13;UBERON:0000477!2.10e-09!286;UBERON:0000200!9.88e-09!6;UBERON:0001894!1.73e-08!7;UBERON:0006222!1.73e-08!7;UBERON:0002680!1.75e-08!9;UBERON:0001895!1.75e-08!9;UBERON:0010092!1.75e-08!9;UBERON:0009663!2.19e-08!7;UBERON:0001871!3.46e-08!7;UBERON:0000475!1.24e-07!365;UBERON:0002021!2.14e-07!5;UBERON:0000064!2.24e-07!219;UBERON:0001872!2.27e-07!5;UBERON:0002298!2.68e-07!8;UBERON:0000349!3.02e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.14e-50;32!UBERON:0001893;9.75e-49;34!UBERON:0002619;3.99e-48;22!UBERON:0003528;5.30e-48;34!UBERON:0002020;5.30e-48;34!UBERON:0002780;2.20e-47;41!UBERON:0001890;2.20e-47;41!UBERON:0002791;1.36e-46;32!UBERON:0000073;1.55e-44;53!UBERON:0002616;1.55e-44;53!UBERON:0001950;8.19e-44;20!UBERON:0000956;9.28e-42;25!UBERON:0000203;9.28e-42;25!UBERON:0000955;6.03e-33;68!UBERON:0001017;4.84e-32;75!UBERON:0001016;1.66e-28;83!UBERON:0002420;1.18e-15;9!UBERON:0007245;1.18e-15;9!UBERON:0010009;1.18e-15;9!UBERON:0010011;1.18e-15;9!UBERON:0000454;1.18e-15;9!UBERON:0000125;2.36e-15;9!UBERON:0002308;2.36e-15;9!UBERON:0000200;2.43e-15;6!UBERON:0004733;6.92e-15;12!UBERON:0002028;6.92e-15;12!UBERON:0002298;7.56e-14;6!UBERON:0004732;1.38e-13;13!UBERON:0002021;9.02e-13;5!UBERON:0001872;9.81e-13;5!UBERON:0001871;1.22e-12;6!UBERON:0000349;1.65e-12;5!UBERON:0007023;5.82e-12;114!UBERON:0001894;1.63e-11;7!UBERON:0009663;1.90e-11;7!UBERON:0011216;1.87e-10;132!UBERON:0000369;7.53e-10;4!UBERON:0002435;7.53e-10;4!UBERON:0000204;7.53e-10;4!UBERON:0002784;8.17e-10;4!UBERON:0002680;1.82e-09;9!UBERON:0001895;1.82e-09;9!UBERON:0001870;1.88e-08;3!UBERON:0010314;2.03e-08;132!UBERON:0000988;5.98e-08;3!UBERON:0005383;1.39e-07;3!UBERON:0005382;1.39e-07;3!UBERON:0001896;1.44e-07;3!UBERON:0005290;1.44e-07;3!UBERON:0002240;3.60e-07;3!UBERON:0005174;3.60e-07;3!UBERON:0001137;3.60e-07;3!UBERON:0010523;8.38e-07;3!UBERON:0001915;8.38e-07;3!UBERON:0001982;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.41e-90,81;UBERON:0001049,8.55e-87,56;UBERON:0005068,8.55e-87,56;UBERON:0006241,8.55e-87,56;UBERON:0007135,8.55e-87,56;UBERON:0001016,2.32e-85,89;UBERON:0000073,7.39e-81,53;UBERON:0002616,7.39e-81,53;UBERON:0000955,9.00e-72,68;UBERON:0006238,9.00e-72,68;UBERON:0002780,1.11e-66,41;UBERON:0001890,1.11e-66,41;UBERON:0003080,1.11e-66,41;UBERON:0006240,1.11e-66,41;UBERON:0003075,1.26e-62,82;UBERON:0007284,1.26e-62,82;UBERON:0002346,4.68e-59,86;UBERON:0001893,3.29e-56,34;UBERON:0001869,3.64e-56,32;UBERON:0003528,5.79e-56,34;UBERON:0002020,5.79e-56,34;UBERON:0002791,7.10e-52,32;UBERON:0010371,2.19e-50,104;UBERON:0003056,4.67e-49,61;UBERON:0002619,3.91e-48,22;UBERON:0001950,8.03e-44,20;UBERON:0004121,4.24e-43,171;UBERON:0000924,4.24e-43,171;UBERON:0006601,4.24e-43,171;UBERON:0000956,9.13e-42,25;UBERON:0000203,9.13e-42,25;UBERON:0010314,1.64e-38,132;UBERON:0007023,1.87e-38,114;UBERON:0011216,2.41e-30,223;UBERON:0000025,8.20e-24,192;UBERON:0003076,3.13e-20,15;UBERON:0003057,3.13e-20,15;UBERON:0004111,4.21e-16,240;UBERON:0002420,1.26e-15,9;UBERON:0007245,1.26e-15,9;UBERON:0010009,1.26e-15,9;UBERON:0010011,1.26e-15,9;UBERON:0000454,1.26e-15,9;UBERON:0000200,2.41e-15,6;UBERON:0000125,2.48e-15,9;UBERON:0002308,2.48e-15,9;UBERON:0004733,6.75e-15,12;UBERON:0002028,6.75e-15,12;UBERON:0007277,6.75e-15,12;UBERON:0002298,7.23e-14,6;UBERON:0004732,1.35e-13,13;UBERON:0000483,1.93e-13,306;UBERON:0000119,3.68e-13,309;UBERON:0002021,8.71e-13,5;UBERON:0001872,9.81e-13,5;UBERON:0001871,1.25e-12,6;UBERON:0000349,1.69e-12,5;UBERON:0001894,1.47e-11,7;UBERON:0006222,1.47e-11,7;UBERON:0009663,2.03e-11,7;UBERON:0000369,7.80e-10,4;UBERON:0002435,7.80e-10,4;UBERON:0000204,7.80e-10,4;UBERON:0010082,7.80e-10,4;UBERON:0002784,8.17e-10,4;UBERON:0002680,1.81e-09,9;UBERON:0001895,1.81e-09,9;UBERON:0010092,1.81e-09,9;UBERON:0001870,1.86e-08,3;UBERON:0000988,5.84e-08,3;UBERON:0000922,7.69e-08,592;UBERON:0001896,1.41e-07,3;UBERON:0005383,1.41e-07,3;UBERON:0005290,1.41e-07,3;UBERON:0005382,1.41e-07,3;UBERON:0010096,1.41e-07,3;UBERON:0002240,3.30e-07,3;UBERON:0005174,3.30e-07,3;UBERON:0001137,3.30e-07,3;UBERON:0010523,8.75e-07,3;UBERON:0001915,8.75e-07,3;UBERON:0001982,8.75e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0.940364164434263,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5284009856066,0,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0.258416759169329,0.71153252537342,0,2.01414658554573,1.52054421143703,3.41686880567437,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0.773043412653187,0,0,3.65921118388786,3.04818467139416,4.06678800043314,2.17688215532278,2.27088765788066,2.55484151353081,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,1.1240175325762,0.402115889646523,0.185176890317059,0,0,0,1.04337364477569,0,0.866198686566443,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761974731506028,0,1.17217447210047,0,0.102827492703324,0,2.5724378936752,0.448524337381443,0,0.95339771567235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.50699269288109,17.785642693887,13.0662686960792,11.4828975297569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37060810223918,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,0.62962469366128,0.6970372701606,0,1.59691809095107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,3.17020642346017,0.842516912477962,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0.845086807596724,0,0,0,2.12856638442359,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,73.566925934706,46.7022462482902,0.222617410045812,0,0,0.996239941255349,0,0,0.102268682502155,0,0,0,0,0,0,0,0,150.246575644759,145.83145031043,23.9536557601433,0,0,0,0.1137934482855,0,0,4.48166385213904,0.874813840149763,1.90987494426621,21.2577932595321,10.4918901604105,71.7134160690291,70.4389885761901,105.80604758537,114.080406520066,0,0.139423744278603,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.247127877893006,0.104421949505455,10.7841812769083,0,50.1325913852226,0,0,0,0,0,22.3433115990258,1.95878396848313,0,0,0,0,0,0,0,0.138674673013139,0.520679215005393,0,0,0,0,0,0,0,0,0,47.6819363046923,0.137041924646751,0,129.217334545948,0,0,0,0,0,0.114536596165916,0.514784993585894,0,0,0,0,0.104602846312333,0,0,6.00420288709789,3.14882371451584,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,48.5090110783675,25.8786471611994,0.803765742325096,1.65047323916681,1.66176135211674,0,0,143.733451052886,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,22.6245173632713,15.338981802152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.5182725569627,83.2219126631389,71.9847851562374,4.58727356552057,17.0830739366753,28.8127309648019,0,0,0.151649117541648,0.570930667089935,0,0.936669811613763,2.17381542916238,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,65.5344987359204,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0.279759015438889,0,0.76736622782191,0.862598491173454,0,0,0,0,0,0,0,0.315446980005013,3.20228299314188,0,0,83.0483880497222,83.6009800320951,47.8901577171454,155.683320458733,10.5870112413122,242.949427906797,92.8484962383144,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,153.648005006848,61.7051697904939,76.2674279089369,138.500129463492,12.0334457984008,0,0,0,0,33.7492156603321,25.8938466108494,0.606965604236632,1.82129753081038,0,0,0,95.3615353664949,186.926222465617,0,0,0,20.7392578689123,0,0,0,0,19.8704792811105,1.73814972905999,0,0,0,0,0,0,0,1.18332000730565,1.19298766662821,0,0,0,0,0,0,0,0,0,0,0,0,1.19370465096821,0.118920090777569,0.11294608203896,1.97892930141772,1.05673990496671,0,0,0,0,0,9.81542335574726,1.78227840196252,21.13278637917,0,0,0.128915775947154,0,0,0,0,0,0,0.573358332605805,0,191.600019357998,17.0176769232747,0,0,0,0,0,0.655593431782173,0.760191006068622,0.305966489225945,0.801652215796681,0.0918948995348449,0,0,0.267964130156178,25.7042526232222,7.24030971033267,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p2@SNCB | |||
}} |
Revision as of 09:16, 22 January 2014
Short description: | p2@SNCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNCB_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 12bp_to_ENST00000393693_5end |
EntrezGene: | SNCB |
HGNC: | 11140 |
UniProt: | Q16143 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.46e-10 | 5 |
neuronal stem cell | 2.68e-09 | 8 |
neuron | 6.38e-09 | 6 |
neuroblast | 6.38e-09 | 6 |
electrically signaling cell | 6.38e-09 | 6 |
capillary endothelial cell | 8.75e-07 | 3 |