FFCP PHASE1:Hg19::chr5:161275320..161275386,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4075 | |||
|TSSclassifier=weak | |||
|UniProt=P14867 | |||
|association_with_transcript=-63bp_to_ENST00000437025_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GABRA1_5end | |||
|id=chr5:161275320..161275386,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.35e-22;82!UBERON:0006215;4.53e-13;3!UBERON:0010122;3.99e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.09e-87!57;UBERON:0005068!8.09e-87!57;UBERON:0006241!8.09e-87!57;UBERON:0007135!8.09e-87!57;UBERON:0005743!3.73e-78!86;UBERON:0000073!7.28e-78!94;UBERON:0001016!7.28e-78!94;UBERON:0002616!5.18e-76!59;UBERON:0001017!2.22e-73!82;UBERON:0000955!4.32e-72!69;UBERON:0006238!4.32e-72!69;UBERON:0002780!1.31e-69!41;UBERON:0001890!1.31e-69!41;UBERON:0006240!1.31e-69!41;UBERON:0003080!9.66e-68!42;UBERON:0003075!6.26e-67!86;UBERON:0007284!6.26e-67!86;UBERON:0002346!2.33e-63!90;UBERON:0001893!5.22e-62!34;UBERON:0002020!6.53e-62!34;UBERON:0003528!6.53e-62!34;UBERON:0001869!7.87e-62!32;UBERON:0002791!1.89e-59!33;UBERON:0007023!1.99e-58!115;UBERON:0002619!2.40e-52!22;UBERON:0003056!5.82e-52!61;UBERON:0000153!2.67e-49!129;UBERON:0007811!2.67e-49!129;UBERON:0001950!1.23e-47!20;UBERON:0000033!2.80e-46!123;UBERON:0000956!1.59e-45!25;UBERON:0000203!1.59e-45!25;UBERON:0004121!2.95e-40!169;UBERON:0000924!5.50e-39!173;UBERON:0006601!5.50e-39!173;UBERON:0000025!9.85e-20!194;UBERON:0003076!2.89e-19!15;UBERON:0003057!2.89e-19!15;UBERON:0004732!8.99e-19!13;UBERON:0002420!1.44e-17!9;UBERON:0007245!1.44e-17!9;UBERON:0010009!1.44e-17!9;UBERON:0010011!1.44e-17!9;UBERON:0000454!1.44e-17!9;UBERON:0002308!1.88e-17!9;UBERON:0000125!1.88e-17!9;UBERON:0000200!8.91e-17!6;UBERON:0004733!9.25e-17!12;UBERON:0002028!9.25e-17!12;UBERON:0007277!9.25e-17!12;UBERON:0001871!7.94e-16!7;UBERON:0004111!5.29e-15!241;UBERON:0000477!2.66e-14!286;UBERON:0001872!9.15e-14!5;UBERON:0002021!9.15e-14!5;UBERON:0000483!9.63e-14!309;UBERON:0000349!1.66e-13!5;UBERON:0000119!1.79e-13!312;UBERON:0000064!3.78e-13!219;UBERON:0009663!6.40e-13!7;UBERON:0000475!1.11e-12!365;UBERON:0002298!3.50e-11!8;UBERON:0000369!7.13e-11!4;UBERON:0002435!7.13e-11!4;UBERON:0000204!7.13e-11!4;UBERON:0010082!7.13e-11!4;UBERON:0002680!9.97e-11!9;UBERON:0001895!9.97e-11!9;UBERON:0010092!9.97e-11!9;UBERON:0001894!4.06e-09!7;UBERON:0006222!4.06e-09!7;UBERON:0002771!4.24e-09!3;UBERON:0000988!1.15e-08!3;UBERON:0005383!1.96e-08!3;UBERON:0005382!1.96e-08!3;UBERON:0001896!3.42e-08!3;UBERON:0005290!3.42e-08!3;UBERON:0010096!3.42e-08!3;UBERON:0000481!4.97e-08!347;UBERON:0000922!1.84e-07!612;UBERON:0000062!3.26e-07!511;UBERON:0001870!6.63e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.92e-69;22!UBERON:0001869;1.08e-68;32!UBERON:0003528;2.44e-68;34!UBERON:0002020;2.44e-68;34!UBERON:0001893;7.26e-67;34!UBERON:0002791;7.23e-64;32!UBERON:0001950;5.69e-62;20!UBERON:0000956;3.71e-60;25!UBERON:0000203;3.71e-60;25!UBERON:0000073;3.77e-58;53!UBERON:0002616;3.77e-58;53!UBERON:0002780;8.51e-58;41!UBERON:0001890;8.51e-58;41!UBERON:0000955;7.78e-40;68!UBERON:0001017;8.16e-37;75!UBERON:0001016;5.71e-29;83!UBERON:0004732;8.69e-27;13!UBERON:0004733;6.93e-24;12!UBERON:0002028;6.93e-24;12!UBERON:0000200;2.10e-23;6!UBERON:0002298;3.98e-21;6!UBERON:0007023;9.93e-20;114!UBERON:0002420;2.73e-19;9!UBERON:0007245;2.73e-19;9!UBERON:0010009;2.73e-19;9!UBERON:0010011;2.73e-19;9!UBERON:0000454;2.73e-19;9!UBERON:0002021;3.74e-19;5!UBERON:0001872;3.81e-19;5!UBERON:0000125;3.99e-19;9!UBERON:0002308;3.99e-19;9!UBERON:0000349;9.69e-19;5!UBERON:0002680;3.79e-15;9!UBERON:0001895;3.79e-15;9!UBERON:0000369;6.20e-15;4!UBERON:0002435;6.20e-15;4!UBERON:0000204;6.20e-15;4!UBERON:0001871;1.27e-13;6!UBERON:0009663;6.18e-13;7!UBERON:0001870;8.79e-13;3!UBERON:0000988;9.21e-12;3!UBERON:0011216;1.52e-11;132!UBERON:0005383;1.99e-11;3!UBERON:0005382;1.99e-11;3!UBERON:0001896;4.17e-11;3!UBERON:0005290;4.17e-11;3!UBERON:0010314;7.61e-10;132!UBERON:0002702;4.71e-09;2!UBERON:0002771;7.79e-09;2!UBERON:0002784;9.15e-09;4!UBERON:0001894;1.35e-08;7!UBERON:0001876;1.35e-08;2!UBERON:0002148;2.25e-08;2!UBERON:0006331;2.25e-08;2!UBERON:0009662;2.25e-08;2!UBERON:0001954;2.42e-08;2!UBERON:0003022;2.42e-08;2!UBERON:0002421;2.42e-08;2!UBERON:0002600;2.42e-08;2!UBERON:0001873;3.99e-08;2!UBERON:0001905;4.37e-08;2!UBERON:0002757;4.37e-08;2!UBERON:0010134;4.37e-08;2!UBERON:0005408;4.37e-08;2!UBERON:0001899;4.37e-08;2!UBERON:0005162;7.38e-08;2!UBERON:0000122;7.38e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.45e-113,56;UBERON:0005068,7.45e-113,56;UBERON:0006241,7.45e-113,56;UBERON:0007135,7.45e-113,56;UBERON:0000073,1.07e-108,53;UBERON:0002616,1.07e-108,53;UBERON:0000955,1.03e-90,68;UBERON:0006238,1.03e-90,68;UBERON:0001017,1.61e-86,81;UBERON:0002780,1.24e-84,41;UBERON:0001890,1.24e-84,41;UBERON:0003080,1.24e-84,41;UBERON:0006240,1.24e-84,41;UBERON:0003075,7.93e-82,82;UBERON:0007284,7.93e-82,82;UBERON:0001016,1.32e-80,89;UBERON:0001893,2.47e-78,34;UBERON:0003528,3.34e-78,34;UBERON:0002020,3.34e-78,34;UBERON:0001869,1.26e-77,32;UBERON:0002346,1.33e-77,86;UBERON:0002791,1.50e-71,32;UBERON:0002619,1.43e-68,22;UBERON:0010371,1.42e-62,104;UBERON:0003056,5.52e-62,61;UBERON:0001950,8.17e-62,20;UBERON:0007023,3.08e-60,114;UBERON:0000956,5.11e-60,25;UBERON:0000203,5.11e-60,25;UBERON:0010314,8.35e-50,132;UBERON:0004121,1.17e-39,171;UBERON:0000924,1.17e-39,171;UBERON:0006601,1.17e-39,171;UBERON:0011216,4.97e-31,223;UBERON:0003076,1.30e-27,15;UBERON:0003057,1.30e-27,15;UBERON:0004732,8.95e-27,13;UBERON:0000025,2.33e-26,192;UBERON:0004733,7.22e-24,12;UBERON:0002028,7.22e-24,12;UBERON:0007277,7.22e-24,12;UBERON:0000200,2.06e-23,6;UBERON:0002298,4.20e-21,6;UBERON:0002420,2.77e-19,9;UBERON:0007245,2.77e-19,9;UBERON:0010009,2.77e-19,9;UBERON:0010011,2.77e-19,9;UBERON:0000454,2.77e-19,9;UBERON:0000125,3.88e-19,9;UBERON:0002308,3.88e-19,9;UBERON:0004111,3.88e-19,240;UBERON:0001872,4.43e-19,5;UBERON:0002021,4.43e-19,5;UBERON:0000349,1.04e-18,5;UBERON:0000483,1.14e-15,306;UBERON:0000119,2.03e-15,309;UBERON:0002680,3.79e-15,9;UBERON:0001895,3.79e-15,9;UBERON:0010092,3.79e-15,9;UBERON:0000369,6.31e-15,4;UBERON:0002435,6.31e-15,4;UBERON:0000204,6.31e-15,4;UBERON:0010082,6.31e-15,4;UBERON:0001871,1.34e-13,6;UBERON:0009663,6.03e-13,7;UBERON:0001870,8.79e-13,3;UBERON:0000988,9.21e-12,3;UBERON:0005383,1.99e-11,3;UBERON:0005382,1.99e-11,3;UBERON:0001896,4.40e-11,3;UBERON:0005290,4.40e-11,3;UBERON:0010096,4.40e-11,3;UBERON:0002702,4.71e-09,2;UBERON:0002771,7.80e-09,2;UBERON:0002784,9.15e-09,4;UBERON:0001894,1.35e-08,7;UBERON:0006222,1.35e-08,7;UBERON:0001876,1.43e-08,2;UBERON:0002148,2.25e-08,2;UBERON:0006331,2.25e-08,2;UBERON:0009662,2.25e-08,2;UBERON:0001954,2.42e-08,2;UBERON:0003022,2.42e-08,2;UBERON:0002421,2.42e-08,2;UBERON:0002600,2.42e-08,2;UBERON:0001873,4.06e-08,2;UBERON:0010122,4.06e-08,2;UBERON:0001905,4.37e-08,2;UBERON:0002757,4.37e-08,2;UBERON:0010134,4.37e-08,2;UBERON:0005408,4.37e-08,2;UBERON:0001899,4.37e-08,2;UBERON:0005162,6.75e-08,2;UBERON:0000122,6.75e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.8185770807552,6.04878490565205,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,18.4173221758092,48.3321791423245,0,0,0,0,0,0,0,0,0,0.173624994933292,6.20018970069687,2.77371808838438,74.7650507953708,84.2613960675932,69.4536904540837,22.8160813040131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89824871816911,0,20.6152712238298,0,0,0,0,0,0.91821828489147,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,2.71176888936639,0,0,50.7752583566147,0,0,0,0,0,0,5.49103993158287,0,0,0,0,0,0,0,6.60462317580768,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6998234859954,5.44813624446302,0,0.550157746388935,0,0,0,28.0055456193494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,9.82550468347784,8.85958431676023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,76.2018634771608,52.1052151131383,24.787804279887,1.14681839138014,5.21366542223206,2.85643453530364,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6232032851456,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,23.3794379351113,75.09918545256,11.653271711172,43.6897855832808,1.00828678488687,34.92441249443,23.5754442622503,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,40.6576259402736,40.6160611279201,26.0425363591492,35.3860220882,1.09394961803644,0,0,0,0,3.21421101526972,4.37168838884471,0,0,0,0,0,12.914249265598,29.9266119710963,0,0,0.078493092850514,6.28462359664008,0,0,0,0,1.71543706023975,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,0,2.113278637917,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,22.3692002728109,1.74540276136151,0,0,0,0,0,0,1.52038201213724,0,0,0,0,0,0.267964130156178,19.0708971075519,0.930896962757057,0,0.23806443146374,1.0980114672121,0.682821857254437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p2@GABRA1 | |||
}} |
Revision as of 08:49, 22 January 2014
Short description: | p2@GABRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GABRA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -63bp_to_ENST00000437025_5end |
EntrezGene: | GABRA1 |
HGNC: | 4075 |
UniProt: | P14867 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data