FFCP PHASE1:Hg19::chr5:63461487..63461525,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27752 | |||
|TSSclassifier=strong | |||
|UniProt=Q86T96 | |||
|association_with_transcript=-145bp_to_ENST00000296615,ENST00000381081,NM_001113561,NM_178532,uc003jth.3,uc003jti.2,uc010iws.2_5end | |||
|coexpression_cluster_id=C4511 | |||
|description=CAGE_peak_3_at_RNF180_5end | |||
|id=chr5:63461487..63461525,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.71e-15;82!UBERON:0002532;5.92e-07;206!UBERON:0010316;5.92e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-56!115;UBERON:0001017!3.52e-34!82;UBERON:0005743!1.74e-33!86;UBERON:0001049!3.41e-32!57;UBERON:0005068!3.41e-32!57;UBERON:0006241!3.41e-32!57;UBERON:0007135!3.41e-32!57;UBERON:0000073!3.25e-31!94;UBERON:0001016!3.25e-31!94;UBERON:0002616!8.38e-30!59;UBERON:0000955!5.28e-29!69;UBERON:0006238!5.28e-29!69;UBERON:0003075!3.87e-28!86;UBERON:0007284!3.87e-28!86;UBERON:0002780!8.72e-28!41;UBERON:0001890!8.72e-28!41;UBERON:0006240!8.72e-28!41;UBERON:0003080!1.18e-26!42;UBERON:0002346!1.51e-25!90;UBERON:0004121!2.78e-24!169;UBERON:0002020!7.62e-23!34;UBERON:0003528!7.62e-23!34;UBERON:0000924!8.84e-23!173;UBERON:0006601!8.84e-23!173;UBERON:0000033!1.20e-22!123;UBERON:0001893!1.62e-22!34;UBERON:0000153!2.28e-22!129;UBERON:0007811!2.28e-22!129;UBERON:0002791!8.35e-22!33;UBERON:0001869!2.43e-21!32;UBERON:0003056!1.99e-20!61;UBERON:0000956!4.01e-16!25;UBERON:0000203!4.01e-16!25;UBERON:0002619!7.31e-15!22;UBERON:0000477!3.87e-14!286;UBERON:0000483!5.45e-14!309;UBERON:0001950!1.03e-13!20;UBERON:0000119!1.07e-13!312;UBERON:0004111!1.15e-13!241;UBERON:0000475!5.49e-13!365;UBERON:0000481!6.45e-13!347;UBERON:0000025!7.69e-13!194;UBERON:0000468!1.00e-09!659;UBERON:0000062!1.24e-09!511;UBERON:0000467!2.49e-09!625;UBERON:0000480!3.36e-09!626;UBERON:0000922!1.77e-08!612;UBERON:0002308!2.95e-08!9;UBERON:0000125!2.95e-08!9;UBERON:0002420!7.68e-08!9;UBERON:0007245!7.68e-08!9;UBERON:0010009!7.68e-08!9;UBERON:0010011!7.68e-08!9;UBERON:0000454!7.68e-08!9;UBERON:0002050!9.62e-08!605;UBERON:0005423!9.62e-08!605;UBERON:0000923!1.74e-07!604;UBERON:0005291!1.74e-07!604;UBERON:0006598!1.74e-07!604;UBERON:0002532!1.74e-07!604;UBERON:0000064!1.99e-07!219;UBERON:0003076!6.46e-07!15;UBERON:0003057!6.46e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.97e-33;41!UBERON:0001890;2.97e-33;41!UBERON:0003528;3.68e-33;34!UBERON:0002020;3.68e-33;34!UBERON:0001893;9.20e-33;34!UBERON:0001869;1.53e-32;32!UBERON:0002791;1.79e-32;32!UBERON:0000073;4.54e-31;53!UBERON:0002616;4.54e-31;53!UBERON:0000956;4.75e-27;25!UBERON:0000203;4.75e-27;25!UBERON:0002619;1.09e-24;22!UBERON:0007023;2.33e-23;114!UBERON:0001950;1.09e-22;20!UBERON:0001017;2.05e-21;75!UBERON:0000955;2.60e-21;68!UBERON:0001016;3.24e-19;83!UBERON:0000125;5.22e-13;9!UBERON:0002308;5.22e-13;9!UBERON:0002420;2.71e-12;9!UBERON:0007245;2.71e-12;9!UBERON:0010009;2.71e-12;9!UBERON:0010011;2.71e-12;9!UBERON:0000454;2.71e-12;9!UBERON:0009663;2.37e-10;7!UBERON:0001894;2.92e-10;7!UBERON:0004732;2.00e-09;13!UBERON:0002298;4.89e-09;6!UBERON:0000200;1.97e-08;6!UBERON:0004733;2.90e-08;12!UBERON:0002028;2.90e-08;12!UBERON:0011216;8.40e-08;132!UBERON:0001872;1.86e-07;5!UBERON:0002021;2.58e-07;5!UBERON:0000369;5.76e-07;4!UBERON:0002435;5.76e-07;4!UBERON:0000204;5.76e-07;4!UBERON:0003296;5.89e-07;4!UBERON:0010133;5.89e-07;4!UBERON:0001871;7.97e-07;6!UBERON:0000349;9.50e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.07e-89,114;UBERON:0001049,2.22e-57,56;UBERON:0005068,2.22e-57,56;UBERON:0006241,2.22e-57,56;UBERON:0007135,2.22e-57,56;UBERON:0000073,3.26e-53,53;UBERON:0002616,3.26e-53,53;UBERON:0001017,8.72e-53,81;UBERON:0001016,5.03e-49,89;UBERON:0002780,1.31e-46,41;UBERON:0001890,1.31e-46,41;UBERON:0003080,1.31e-46,41;UBERON:0006240,1.31e-46,41;UBERON:0003075,7.53e-46,82;UBERON:0007284,7.53e-46,82;UBERON:0000955,3.79e-44,68;UBERON:0006238,3.79e-44,68;UBERON:0002346,8.88e-43,86;UBERON:0003528,3.48e-38,34;UBERON:0002020,3.48e-38,34;UBERON:0001893,1.26e-37,34;UBERON:0010371,9.63e-36,104;UBERON:0001869,1.28e-35,32;UBERON:0002791,1.76e-35,32;UBERON:0003056,1.65e-33,61;UBERON:0010314,2.68e-31,132;UBERON:0011216,5.77e-28,223;UBERON:0004121,4.67e-27,171;UBERON:0000924,4.67e-27,171;UBERON:0006601,4.67e-27,171;UBERON:0000956,9.98e-27,25;UBERON:0000203,9.98e-27,25;UBERON:0002619,1.36e-24,22;UBERON:0001950,1.22e-22,20;UBERON:0000025,9.44e-18,192;UBERON:0004111,3.92e-17,240;UBERON:0000125,6.72e-13,9;UBERON:0002308,6.72e-13,9;UBERON:0002420,3.39e-12,9;UBERON:0007245,3.39e-12,9;UBERON:0010009,3.39e-12,9;UBERON:0010011,3.39e-12,9;UBERON:0000454,3.39e-12,9;UBERON:0003076,7.56e-12,15;UBERON:0003057,7.56e-12,15;UBERON:0001894,2.73e-10,7;UBERON:0006222,2.73e-10,7;UBERON:0009663,2.97e-10,7;UBERON:0000483,5.53e-10,306;UBERON:0000119,1.11e-09,309;UBERON:0004732,1.98e-09,13;UBERON:0002298,7.34e-09,6;UBERON:0000200,1.96e-08,6;UBERON:0004733,2.96e-08,12;UBERON:0002028,2.96e-08,12;UBERON:0007277,2.96e-08,12;UBERON:0000922,1.62e-07,592;UBERON:0005423,1.92e-07,581;UBERON:0001872,2.12e-07,5;UBERON:0002050,2.30e-07,564;UBERON:0002021,2.71e-07,5;UBERON:0000369,5.75e-07,4;UBERON:0002435,5.75e-07,4;UBERON:0000204,5.75e-07,4;UBERON:0010082,5.75e-07,4;UBERON:0000923,6.65e-07,560;UBERON:0010316,6.65e-07,560;UBERON:0005291,6.65e-07,560;UBERON:0006598,6.65e-07,560;UBERON:0010317,6.65e-07,560;UBERON:0002532,6.65e-07,560;UBERON:0003296,7.27e-07,4;UBERON:0010133,7.27e-07,4;UBERON:0001871,8.85e-07,6;UBERON:0000349,9.74e-07,5 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0036519099174,1.36874425072884,1.00434111675842,1.60468152070698,2.38091709404843,1.57421562627358,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.378139268656271,0.665188192387692,0.702678285545008,2.68507104770311,0,0,0,0,0,0,0,0,0,0,1.04142150482278,0.56530794192401,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0,0.662045904066094,0,0,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.326923806226917,0.454072282934794,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.494533858557114,0,0,0,0,0.277064115484183,0.438977620880838,0.30648779579902,0.45071417671979,0.113432183160021,0,0,0,0,0,0.257640540045629,0.558350568994769,0.168776332241266,0,0,0,0.323292113637624,0,0.201504196455281,0.339121184620975,0.57978255948989,1.63647672354501,0.573609190778008,0,0.265059536642971,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,3.54473944008842,0,0,0.171567810298526,0.548751427043128,0,1.10581869652794,0.185176890317059,0,0,0,1.04337364477569,1.17408694235822,0,0,0,0.790204397959275,0,0,0,0,0,1.51183915378974,0.283550194484773,0,0.290633938513962,0.766765358330422,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0,0.904902010304444,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.904318131178758,0,0.699810938274399,0,0,0,0,1.14861935834114,1.42636905040718,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0,2.28685161800217,5.20559415430487,1.54657762555539,2.84777651068393,2.55175500661265,0,0,0,0,0,0,1.66376689224646,0.356857977594324,1.10391690523754,0.35142424497814,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0.640695746278505,0,0,0,0,0,0,0,0,0,0.40101294060657,0.920809889358963,0,0,0.262248829918848,0,0.308061348417659,0,0,0.211103257785751,0,0.340187410553031,0,0,0,0,1.27438136522519,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0,0,1.64865618636356,0,0,0.574265537996172,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0,0.165284915360978,0.192190067365106,1.53135254993501,0.4046311234222,0,0,0,0.308033580176089,0,0,0.37064843820784,0.715624433709956,0.372158369359667,0.632758849437452,0.762520775695299,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.974853958525138,0,0.136499911407986,0,0,0,0,0.876901770507525,0,0,0.405820753925408,0,0.281695602532241,0.430234056612155,0.491245205065606,0,0,0,0.658589785919804,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,1.69458841398202,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0.23874448473769,0,0.307160702099232,3.97659059106519,2.11004124615769,0.222617410045812,0,0.422250816255987,9.16540745954921,2.76283915531148,0,0.613612095012929,3.93871377475422,0.311039587661807,0,0,0,6.41182136640068,0,0,5.81599647657131,2.41197055220813,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,11.5146380155799,5.06505042226713,4.5774520895125,1.99042667876204,2.65992857058193,4.60709334023342,0,0,4.38616473471643,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0.432777279484182,1.99052386215701,1.85760885457012,0.611030144933625,0,0,0,2.3590396543237,0.802577647298789,3.74823113160543,0,0,0,18.150882531072,0,5.20323694771833,4.80218005176509,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.694238953340524,0,0,5.94070672022902,2.40780445460263,0,0,0,2.81268147816416,0,2.25980740780532,0,0,3.60871536948509,0.391102765469606,0.0801588202515337,3.62870091056899,0,0.144090417154106,0,0,0,0.745515213392595,0,0.271808412147228,0,0,0,9.60672461935663,2.19048606227189,0,0.429765441419957,0,7.81990723562312,8.47893568843229,3.58936512288407,2.1964690054889,4.29226048136571,5.80245789348869,1.47803639470798,0.360299883542404,0,0,0,0,0,0,3.18091875923721,2.45166131000836,0.160753148465019,0,0,0.674921674654501,0,3.76647251279753,0,6.30445658393585,2.25554728980492,0,0.35857467866569,1.72723677587501,5.00286728461357,4.63464379255802,0,0,0,0,0,0,0.170388021785422,0,2.93104467356165,1.32506888912221,6.72271373080063,5.15707146796491,0.684347351537318,0,3.41719720216623,2.20086027139532,4.14239055347196,0.992332043623902,0,0,0,3.80812462358632,4.7631079864313,5.51422038174231,3.93447156851765,0.942324577501406,5.31640907980192,5.12510312588245,3.8809188519015,3.44045517414043,4.10437490686353,4.09836259413131,1.38348634936231,0,0.303298235083296,0.570930667089935,0.235265819698172,0,0.144921028610825,0.149254802886874,0,0,0,0.754703705257725,0,0.457680136793847,0,0,0.147855149989634,0.477890301491107,0,0.310525913752519,0,0.797525143673985,2.08698024724694,0.601030435988874,1.90402606084398,0.406870733204662,0.545545977607678,0.751873899297419,0.464033759878494,0,0.400027764663154,0,0,6.30924491143255,0,1.07220795687463,0,0,0.463044948647668,0,0,0.308801447160972,0,0.353378291891762,0,0,0,0,0,2.62691028688288,0.779441235357554,0.132864840313363,2.78061170234935,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0,4.94565033242738,2.8339315265117,4.15048033548593,3.07674546361133,15.3763734695248,3.66533438060355,4.52131807769183,5.71077681036618,0,0,0,0,1.52552838186867,1.3807198521202,0.397832444232549,4.73825068600321,0.20170506870352,0.781514011233092,0,0,0,4.45748058481405,4.68646859168308,3.51367554052013,3.48786956066487,9.84554656232795,1.09651553371436,3.96968942711435,0,0,3.21421101526972,6.05310699993883,10.3184152720227,8.19583888864671,0.354809480650555,0,0,5.02976024028555,3.28863867814245,0.118193840883968,1.55723962648897,6.75040598514421,6.12750800672407,0,0.913158720509496,0,0.9555033757741,7.3620840501956,0.158013611732727,0,0.173858272302579,0,0,0,0,1.29068207646083,0.118332000730565,0.255640214277473,7.62096690343672,0,0.62041277132864,0.955538938977433,1.23040974977572,0,0,3.23714418593947,0.513314034281235,0,2.4285549652957,0,0,0,0.22589216407792,0,0,1.00326405540328,2.62271472604749,0,8.58019126138669,0,8.04864715171276,5.94092800654172,4.6492130034174,0.339854229375634,1.31577485171795,0.322289439867886,0,0,0,0.160482733378337,1.46067277649303,2.2936464170227,3.44014999563483,0.157771562193185,3.26359152916391,11.3451179488498,0,0,0,0.432626562123789,0,0,0,0,0,0,0,2.1218035501107,0.535928260312357,4.97501663675268,3.82702084689012,2.98527574661373,2.61870874610114,0.0645889098360061,0,0.33639558774184,7.51036467682346,5.2550469129137,0.870866991587845,0.684466602170562,1.0776328482334,1.93649954560226,0.665320713092027,0.0814032686109745,0,0,0,0,5.37862354404612,2.03448089157869,7.98908129022615,1.61019034872821,0 | |||
|short_description=p3@RNF180 | |||
}} |
Revision as of 05:38, 22 January 2014
Short description: | p3@RNF180 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RNF180_5end |
Coexpression cluster: | C4511_occipital_ductus_parietal_temporal_aorta_spinal_pituitary |
Association with transcript: | -145bp_to_ENST00000296615, ENST00000381081, NM_001113561, NM_178532, uc003jth.3, uc003jti.2, uc010iws.2_5end |
EntrezGene: | RNF180 |
HGNC: | 27752 |
UniProt: | Q86T96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data