FFCP PHASE1:Hg19::chr4:123839002..123839016,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_at_chr4:123839002..123839016,- | |||
|id=chr4:123839002..123839016,- | |||
|ontology_enrichment_celltype=CL:0000213!1.67e-12!57;CL:0000215!1.67e-12!57;CL:0002139!6.77e-12!24;CL:0005020!3.02e-11!6;CL:0002138!3.02e-11!6;CL:0005022!3.02e-11!6;CL:0000066!3.66e-09!254;CL:0000222!1.07e-07!119;CL:0000115!1.15e-07!35;CL:0000077!2.80e-07!19;CL:0002078!3.07e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000054;6.94e-09;2!CL:0000137;6.94e-09;2!CL:0000092;6.94e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,6.94e-09,2;CL:0000137,6.94e-09,2;CL:0000092,6.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.40e-42;29!UBERON:0006595;2.66e-08;86 | |||
|ontology_enrichment_disease=DOID:305!1.55e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:200;6.94e-09;2!DOID:4305;6.94e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.40e-13,106;DOID:162,7.82e-10,235;DOID:0050687,8.16e-10,143;DOID:14566,1.33e-09,239;DOID:200,6.94e-09,2;DOID:4305,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.35e-38!9;UBERON:0001557!2.41e-17!19;UBERON:0008947!1.55e-09!38;UBERON:0003258!1.55e-09!38;UBERON:0001473!1.91e-08!8;UBERON:0004536!1.91e-08!8;UBERON:0006558!1.91e-08!8;UBERON:0000072!1.56e-07!46;UBERON:0002465!9.25e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.39e-136;9!UBERON:0001557;1.39e-136;9!UBERON:0000072;1.58e-30;37!UBERON:0000065;8.73e-26;44!UBERON:0001282;2.63e-16;1!UBERON:0009842;2.63e-16;1!UBERON:0003704;2.63e-16;1!UBERON:0001171;2.63e-16;1!UBERON:0001172;2.63e-16;1!UBERON:0001004;1.64e-13;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.39e-136,9;UBERON:0001557,1.70e-64,19;UBERON:0008947,5.59e-32,38;UBERON:0003258,5.59e-32,38;UBERON:0000072,9.82e-26,47;UBERON:0000065,2.60e-22,54;UBERON:0001041,9.64e-17,87;UBERON:0001282,3.07e-16,1;UBERON:0009842,3.07e-16,1;UBERON:0003704,3.07e-16,1;UBERON:0001171,3.07e-16,1;UBERON:0001172,3.07e-16,1;UBERON:0001004,4.37e-16,74;UBERON:0004921,5.42e-12,118;UBERON:0001007,1.36e-09,145;UBERON:0001555,1.36e-09,145;UBERON:0007026,1.36e-09,145;UBERON:0001048,1.16e-08,160;UBERON:0004119,1.33e-08,160;UBERON:0000925,1.33e-08,160;UBERON:0006595,1.33e-08,160;UBERON:0011216,4.13e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4757596038649,7.08055698328027,5.06123162755312,8.49263590039433,8.27941887551143,7.59265981155509,6.74156540800822,5.29797955838434,5.38646019724947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,1.73396969981747,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963099152036517,0,0,0,0.231522474323834,0.489473409012935,0.358177682162975,0,0,0,0,0,0,1.38172136692479,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66967466827017,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444925607568277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:123839002..123839016,- | |||
}} |
Revision as of 03:00, 22 January 2014
Short description: | p@chr4:123839002..123839016, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:123839002..123839016, - |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 6.94e-09 | 2 |
osteocyte | 6.94e-09 | 2 |
osteoclast | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.39e-136 | 9 |
upper respiratory tract | 1.70e-64 | 19 |
respiratory primordium | 5.59e-32 | 38 |
endoderm of foregut | 5.59e-32 | 38 |
segment of respiratory tract | 9.82e-26 | 47 |
respiratory tract | 2.60e-22 | 54 |
foregut | 9.64e-17 | 87 |
intralobular bile duct | 3.07e-16 | 1 |
acinus | 3.07e-16 | 1 |
intrahepatic bile duct | 3.07e-16 | 1 |
portal lobule | 3.07e-16 | 1 |
hepatic acinus | 3.07e-16 | 1 |
respiratory system | 4.37e-16 | 74 |
subdivision of digestive tract | 5.42e-12 | 118 |
digestive system | 1.36e-09 | 145 |
digestive tract | 1.36e-09 | 145 |
primitive gut | 1.36e-09 | 145 |
primordium | 1.16e-08 | 160 |
endoderm-derived structure | 1.33e-08 | 160 |
endoderm | 1.33e-08 | 160 |
presumptive endoderm | 1.33e-08 | 160 |
organ system subdivision | 4.13e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.40e-13 | 106 |
cancer | 7.82e-10 | 235 |
cell type cancer | 8.16e-10 | 143 |
disease of cellular proliferation | 1.33e-09 | 239 |
giant cell tumor | 6.94e-09 | 2 |
bone giant cell tumor | 6.94e-09 | 2 |