FFCP PHASE1:Hg19::chr3:63263953..63264016,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=132204 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16507 | |||
|TSSclassifier=strong | |||
|UniProt=F8WE43,F8WF23 | |||
|association_with_transcript=0bp_to_ENST00000450542,ENST00000468110_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SYNPR_5end | |||
|id=chr3:63263953..63264016,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.50e-12!8;CL:0000540!2.34e-09!6;CL:0000031!2.34e-09!6;CL:0000404!2.34e-09!6;CL:0000133!1.09e-08!59;CL:0002322!2.52e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.12e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.78e-09,8;CL:0002322,3.35e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.26e-18;82!UBERON:0006215;3.50e-09;3!UBERON:0006241;1.67e-07;3!UBERON:0003057;1.67e-07;3 | |||
|ontology_enrichment_disease=DOID:3095!1.16e-12!22;DOID:2994!1.16e-12!22;DOID:171!9.05e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.04e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,9.23e-08,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;4.62e-56;32!UBERON:0002619;4.96e-54;22!UBERON:0001893;1.31e-53;34!UBERON:0003528;3.42e-53;34!UBERON:0002020;3.42e-53;34!UBERON:0002791;1.81e-52;32!UBERON:0001950;3.44e-49;20!UBERON:0000956;5.83e-47;25!UBERON:0000203;5.83e-47;25!UBERON:0002780;1.29e-46;41!UBERON:0001890;1.29e-46;41!UBERON:0000073;5.02e-41;53!UBERON:0002616;5.02e-41;53!UBERON:0001017;5.65e-31;75!UBERON:0001016;6.13e-30;83!UBERON:0000955;2.68e-29;68!UBERON:0001871;5.95e-17;6!UBERON:0002420;8.49e-17;9!UBERON:0007245;8.49e-17;9!UBERON:0010009;8.49e-17;9!UBERON:0010011;8.49e-17;9!UBERON:0000454;8.49e-17;9!UBERON:0000125;7.18e-16;9!UBERON:0002308;7.18e-16;9!UBERON:0000200;1.66e-15;6!UBERON:0011216;7.90e-14;132!UBERON:0004732;1.05e-13;13!UBERON:0000349;2.58e-13;5!UBERON:0007023;3.93e-13;114!UBERON:0002021;6.05e-13;5!UBERON:0001872;6.35e-13;5!UBERON:0009663;2.48e-12;7!UBERON:0000922;2.81e-12;49!UBERON:0004733;6.44e-12;12!UBERON:0002028;6.44e-12;12!UBERON:0002050;3.44e-11;5!UBERON:0005423;3.44e-11;5!UBERON:0000369;1.80e-10;4!UBERON:0002435;1.80e-10;4!UBERON:0000204;1.80e-10;4!UBERON:0002346;1.78e-09;4!UBERON:0000923;1.78e-09;4!UBERON:0010316;1.78e-09;4!UBERON:0005291;1.78e-09;4!UBERON:0002680;1.81e-09;9!UBERON:0001895;1.81e-09;9!UBERON:0002298;2.58e-09;6!UBERON:0001870;9.29e-09;3!UBERON:0005383;3.63e-08;3!UBERON:0005382;3.63e-08;3!UBERON:0010314;9.54e-08;132!UBERON:0002240;1.67e-07;3!UBERON:0005174;1.67e-07;3!UBERON:0001137;1.67e-07;3!UBERON:0000988;3.47e-07;3!UBERON:0004121;6.04e-07;165 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.74e-83,81;UBERON:0001016,2.10e-82,89;UBERON:0001049,1.75e-81,56;UBERON:0005068,1.75e-81,56;UBERON:0006241,1.75e-81,56;UBERON:0007135,1.75e-81,56;UBERON:0000073,2.31e-75,53;UBERON:0002616,2.31e-75,53;UBERON:0002346,6.47e-70,86;UBERON:0002780,1.03e-64,41;UBERON:0001890,1.03e-64,41;UBERON:0003080,1.03e-64,41;UBERON:0006240,1.03e-64,41;UBERON:0000955,1.34e-64,68;UBERON:0006238,1.34e-64,68;UBERON:0003075,1.59e-62,82;UBERON:0007284,1.59e-62,82;UBERON:0001869,1.64e-62,32;UBERON:0001893,2.45e-62,34;UBERON:0003528,8.81e-62,34;UBERON:0002020,8.81e-62,34;UBERON:0002791,5.39e-58,32;UBERON:0002619,5.56e-54,22;UBERON:0003056,2.09e-51,61;UBERON:0004121,7.45e-51,171;UBERON:0000924,7.45e-51,171;UBERON:0006601,7.45e-51,171;UBERON:0001950,3.86e-49,20;UBERON:0000956,6.45e-47,25;UBERON:0000203,6.45e-47,25;UBERON:0010371,2.07e-46,104;UBERON:0007023,9.15e-40,114;UBERON:0010314,5.19e-37,132;UBERON:0011216,2.10e-33,223;UBERON:0003076,2.67e-17,15;UBERON:0003057,2.67e-17,15;UBERON:0001871,6.64e-17,6;UBERON:0002420,8.06e-17,9;UBERON:0007245,8.06e-17,9;UBERON:0010009,8.06e-17,9;UBERON:0010011,8.06e-17,9;UBERON:0000454,8.06e-17,9;UBERON:0000125,5.85e-16,9;UBERON:0002308,5.85e-16,9;UBERON:0000025,9.34e-16,192;UBERON:0000200,1.64e-15,6;UBERON:0004732,9.15e-14,13;UBERON:0000349,2.58e-13,5;UBERON:0002021,6.13e-13,5;UBERON:0001872,6.28e-13,5;UBERON:0009663,2.36e-12,7;UBERON:0004733,5.71e-12,12;UBERON:0002028,5.71e-12,12;UBERON:0007277,5.71e-12,12;UBERON:0004111,1.52e-11,240;UBERON:0000369,1.84e-10,4;UBERON:0002435,1.84e-10,4;UBERON:0000204,1.84e-10,4;UBERON:0010082,1.84e-10,4;UBERON:0000922,3.72e-10,592;UBERON:0002680,1.61e-09,9;UBERON:0001895,1.61e-09,9;UBERON:0010092,1.61e-09,9;UBERON:0002298,2.22e-09,6;UBERON:0001870,9.30e-09,3;UBERON:0002050,1.57e-08,564;UBERON:0000923,3.39e-08,560;UBERON:0010316,3.39e-08,560;UBERON:0005291,3.39e-08,560;UBERON:0006598,3.39e-08,560;UBERON:0010317,3.39e-08,560;UBERON:0002532,3.39e-08,560;UBERON:0005383,3.72e-08,3;UBERON:0005382,3.72e-08,3;UBERON:0005423,9.53e-08,581;UBERON:0000483,9.53e-08,306;UBERON:0000119,1.47e-07,309;UBERON:0002240,1.69e-07,3;UBERON:0005174,1.69e-07,3;UBERON:0001137,1.69e-07,3;UBERON:0000988,2.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07976597760949,0.443458794925128,0.87834785693126,8.2516817563559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,0.927708378250397,2.20768491452085,4.04278114559945,2.77552935963191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7373519611868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34434894420094,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31960861178188,6.50699269288109,1.54657762555539,3.18280904135263,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.6605635704453,25.7425032031238,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,69.7919577188557,45.8274404919545,49.9034495002985,0,0,0,0,0,0,0,2.33283690706603,0,22.143534645346,15.1951512668014,94.6006765165916,151.051269066053,151.024833285263,64.06053596896,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,2.89824871816911,0,11.4789578405416,0,0,0,0,1.20990716048664,11.6307649419586,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,39.3206488958126,0,0,79.7082921084513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8117680838741,3.83335060897581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,194.03604431347,31.3267834056624,0.643012593860077,0.687697182986169,1.66176135211674,0,0,77.2734360690074,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,2.90911723833918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.8222953379201,52.2272413780402,32.9252147758095,0,7.98689171065336,5.15400144413483,0.415045904808692,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4622485504562,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,6.76243549980355,0.655257829152084,1.69732529954025,1.48802444071178,66.4295696428252,2.79322458986622,0,0,0,0,0,50.5484001509136,51.0107674772106,15.9633859057151,62.765607457671,14.6201583808597,49.51659276438,54.4172925779338,5.71077681036618,0,0,0,0,0,0,0,0,0,0,0,0,0,54.4352932024261,44.5214516209893,27.0759703416551,51.6838853080341,12.0334457984008,1.09651553371436,0,4.04503862027127,0,3.21421101526972,0.672567444437648,0,0.91064876540519,0.354809480650555,0,0,4.14615371158673,53.1444010387821,0,0,0,16.8113681210122,0,4.56579360254748,0,0,86.5580949979308,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.905777061400041,0,0.437119121007915,0,0,0,8.04864715171276,1.48523200163543,7.1851473689178,0,0,0,0,0,0,0,3.65168194123259,0,0,0,58.8126390151412,7.41796173578642,3.1741610430924,0,0,0,0.126166424835079,0.109265571963696,0,1.42784361638774,1.87052183685892,0.0918948995348449,0.250707539292375,0,0,3.31667775783512,3.82702084689012,0,0,0,0,0,0.25458863311266,0.404234377916439,0,0,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0.402547587182052,0 | |||
|short_description=p1@SYNPR | |||
}} |
Revision as of 19:33, 21 January 2014
Short description: | p1@SYNPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYNPR_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000450542, ENST00000468110_5end |
EntrezGene: | SYNPR |
HGNC: | 16507 |
UniProt: | F8WE43F8WF23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.78e-09 | 8 |
embryonic stem cell | 3.35e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.23e-08 | 10 |