FFCP PHASE1:Hg19::chr22:30970644..30970658,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9514 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24240 | |||
|TSSclassifier=strong | |||
|UniProt=Q99999 | |||
|association_with_transcript=-70bp_to_ENST00000406361_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_GAL3ST1_5end | |||
|id=chr22:30970644..30970658,- | |||
|ontology_enrichment_celltype=CL:1000507!1.85e-08!12;CL:1000494!1.85e-08!12;CL:1000497!1.46e-07!18;CL:0002518!1.46e-07!18;CL:1000449!3.85e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.66e-14;10!CL:1000494;1.66e-14;10!CL:1000497;3.95e-11;17!CL:0002518;3.95e-11;17!CL:0000650;1.21e-09;2!CL:1000500;1.21e-09;2!CL:1000618;1.21e-09;2!CL:1001318;1.21e-09;2!CL:0002173;1.21e-09;2!CL:1000449;1.89e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.42e-14,10;CL:1000494,2.42e-14,10;CL:1000497,4.99e-11,17;CL:0002518,4.99e-11,17;CL:0000650,1.60e-09,2;CL:1000500,1.60e-09,2;CL:1000618,1.60e-09,2;CL:1001318,1.60e-09,2;CL:0002173,1.60e-09,2;CL:1000449,2.41e-09,15 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.05e-13;3!UBERON:0003057;3.05e-13;3!UBERON:0006601;2.05e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.35e-40!115;UBERON:0001049!9.89e-35!57;UBERON:0005068!9.89e-35!57;UBERON:0006241!9.89e-35!57;UBERON:0007135!9.89e-35!57;UBERON:0002616!7.04e-29!59;UBERON:0001017!2.80e-28!82;UBERON:0003075!3.23e-28!86;UBERON:0007284!3.23e-28!86;UBERON:0001893!1.04e-27!34;UBERON:0002020!1.17e-27!34;UBERON:0003528!1.17e-27!34;UBERON:0005743!2.57e-27!86;UBERON:0002780!3.04e-27!41;UBERON:0001890!3.04e-27!41;UBERON:0006240!3.04e-27!41;UBERON:0002791!1.92e-26!33;UBERON:0000955!2.05e-26!69;UBERON:0006238!2.05e-26!69;UBERON:0003080!2.47e-26!42;UBERON:0002346!3.41e-26!90;UBERON:0001869!4.16e-25!32;UBERON:0000073!1.50e-24!94;UBERON:0001016!1.50e-24!94;UBERON:0003056!2.33e-20!61;UBERON:0002619!3.27e-20!22;UBERON:0000025!3.98e-18!194;UBERON:0001950!4.02e-18!20;UBERON:0000956!4.45e-17!25;UBERON:0000203!4.45e-17!25;UBERON:0000064!1.66e-15!219;UBERON:0004111!4.96e-15!241;UBERON:0000483!5.76e-14!309;UBERON:0000481!6.12e-14!347;UBERON:0000033!9.94e-14!123;UBERON:0000119!1.40e-13!312;UBERON:0000477!5.30e-13!286;UBERON:0002308!9.14e-13!9;UBERON:0000125!9.14e-13!9;UBERON:0000153!2.05e-12!129;UBERON:0007811!2.05e-12!129;UBERON:0002420!2.59e-12!9;UBERON:0007245!2.59e-12!9;UBERON:0010009!2.59e-12!9;UBERON:0010011!2.59e-12!9;UBERON:0000454!2.59e-12!9;UBERON:0000062!3.75e-12!511;UBERON:0004121!2.16e-11!169;UBERON:0000924!9.25e-11!173;UBERON:0006601!9.25e-11!173;UBERON:0009663!4.29e-10!7;UBERON:0003076!2.01e-09!15;UBERON:0003057!2.01e-09!15;UBERON:0000489!7.09e-09!32;UBERON:0009773!1.85e-08!12;UBERON:0001231!1.85e-08!12;UBERON:0004810!1.85e-08!12;UBERON:0001871!2.87e-08!7;UBERON:0000922!3.69e-08!612;UBERON:0000475!3.88e-08!365;UBERON:0005172!1.56e-07!55;UBERON:0005173!1.56e-07!55;UBERON:0000349!3.45e-07!5;UBERON:0004732!3.46e-07!13;UBERON:0004211!3.85e-07!16;UBERON:0001285!3.85e-07!16;UBERON:0007684!3.85e-07!16;UBERON:0003220!3.85e-07!16;UBERON:0004208!3.85e-07!16;UBERON:0002298!8.52e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.89e-29;34!UBERON:0003528;6.27e-29;34!UBERON:0002020;6.27e-29;34!UBERON:0002780;3.20e-25;41!UBERON:0001890;3.20e-25;41!UBERON:0001869;2.64e-24;32!UBERON:0002791;1.13e-23;32!UBERON:0000125;1.72e-21;9!UBERON:0002308;1.72e-21;9!UBERON:0001950;4.98e-21;20!UBERON:0000073;3.16e-20;53!UBERON:0002616;3.16e-20;53!UBERON:0002619;5.30e-19;22!UBERON:0000489;6.77e-18;29!UBERON:0000956;1.51e-16;25!UBERON:0000203;1.51e-16;25!UBERON:0002420;1.35e-15;9!UBERON:0007245;1.35e-15;9!UBERON:0010009;1.35e-15;9!UBERON:0010011;1.35e-15;9!UBERON:0000454;1.35e-15;9!UBERON:0001016;1.11e-14;83!UBERON:0004211;1.66e-14;10!UBERON:0009773;1.66e-14;10!UBERON:0001231;1.66e-14;10!UBERON:0004810;1.66e-14;10!UBERON:0009663;2.35e-14;7!UBERON:0000988;1.63e-13;3!UBERON:0001017;2.19e-13;75!UBERON:0002240;3.05e-13;3!UBERON:0005174;3.05e-13;3!UBERON:0001137;3.05e-13;3!UBERON:0000955;1.05e-12;68!UBERON:0002113;2.92e-12;24!UBERON:0011143;2.92e-12;24!UBERON:0002298;9.02e-12;6!UBERON:0007023;4.47e-10;114!UBERON:0005162;9.21e-10;2!UBERON:0000122;9.21e-10;2!UBERON:0003567;1.21e-09;2!UBERON:0003838;1.21e-09;2!UBERON:0003586;1.21e-09;2!UBERON:0005169;1.21e-09;2!UBERON:0002321;1.21e-09;2!UBERON:0005215;1.21e-09;2!UBERON:0002303;1.21e-09;2!UBERON:0002319;1.21e-09;2!UBERON:0006554;1.75e-09;30!UBERON:0001008;1.75e-09;30!UBERON:0002148;1.89e-09;2!UBERON:0006331;1.89e-09;2!UBERON:0009662;1.89e-09;2!UBERON:0006555;1.89e-09;15!UBERON:0004819;1.89e-09;15!UBERON:0001285;1.89e-09;15!UBERON:0007684;1.89e-09;15!UBERON:0001875;2.47e-09;2!UBERON:0006514;2.47e-09;2!UBERON:0001871;3.03e-09;6!UBERON:0001872;2.83e-08;5!UBERON:0004732;4.67e-08;13!UBERON:0005172;4.55e-07;52!UBERON:0005173;4.55e-07;52 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0.927443239800615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00084595560703,0,0.823240336780769,0,0.355391948742546,0,0.602878754119172,1.74306691720059,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0.902399225814824,0.385076685522074,4.70609861506113,2.92278449306521,1.05551628892876,0,0,0.647747748306418,0,3.25135725052623,2.00675909541941,0.254876273045038,0,1.11937377361089,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,0.19924798825107,0.276283915531148,3.27512572210559,0,0,0,0,0,0,0.295930216910801,0,0,0.969332746095218,2.41197055220813,0,0,0,0,0,0,0.236387681767936,0,0,0,1.77148277162768,0.482385754501632,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,1.99052386215701,0.530745387020035,0,0,0,0,7.3467234948938,0,2.81117334870407,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,1.2029051231617,0,0,0.640358984218058,0,0.288180834308212,0,1.54435498075768,0,0,0.235694034616795,0,0,0,0,4.80336230967832,1.36905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.201550417460179,0,0,0.551482276150566,0.412079291905832,0.0674035438541849,0.196854963029498,0,0.795229689809303,0.817220436669454,0.964518890790115,0,1.24632101408756,0,0,1.27574068981852,0,1.18208560948797,1.67854682031994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,2.65013777824443,2.45637617086946,2.38018683136842,0.513260513652988,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.625954653532499,0,0.887432412294818,4.16045899707269,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.751288044986092,0,0,0.181848659202559,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0.308801447160972,0,0,0.578742114812744,0.337884881306145,0.76872455576384,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60573062741149,1.41696576325585,0.478901577171454,0.41023272848151,0.252071696221718,2.00556032146232,0.807378228159255,2.85538840518309,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,2.29627787702542,3.12431239445539,0.826747186004736,2.28296916698065,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,3.19457744991109,2.10472875401117,0.709163045303809,0,0.313972371402056,0.942693539496011,0.560544326627578,0.913158720509496,0,2.38875843943525,0.142953088353313,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0.487671699929078,0,0.102662806856247,1.1598144313382,0,0,0,0.118920090777569,0,0,0,1.15761237161917,0,0.470317296361523,0.245148321753905,0,1.96308467114945,2.37637120261669,6.339835913751,0,0,0,0,0,0,0.0802413666891683,0.730336388246517,0,2.15009374727177,0,2.44769364687293,0.872701380680755,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0.250707539292375,0.227336094654718,0.267964130156178,0.829169439458779,2.0686599172379,0,0,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0.665320713092027,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p4@GAL3ST1 | |||
}} |
Revision as of 15:18, 21 January 2014
Short description: | p4@GAL3ST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GAL3ST1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -70bp_to_ENST00000406361_5end |
EntrezGene: | GAL3ST1 |
HGNC: | 24240 |
UniProt: | Q99999 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.42e-14 | 10 |
nephron tubule epithelial cell | 2.42e-14 | 10 |
kidney cell | 4.99e-11 | 17 |
kidney epithelial cell | 4.99e-11 | 17 |
mesangial cell | 1.60e-09 | 2 |
kidney interstitial cell | 1.60e-09 | 2 |
juxtaglomerular complex cell | 1.60e-09 | 2 |
renal interstitial pericyte | 1.60e-09 | 2 |
extraglomerular mesangial cell | 1.60e-09 | 2 |
epithelial cell of nephron | 2.41e-09 | 15 |