FFCP PHASE1:Hg19::chr2:242626195..242626243,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1841 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3061 | |||
|TSSclassifier=strong | |||
|UniProt=P23919 | |||
|association_with_transcript=0bp_to_ENST00000464603,uc002wbz.1,uc002wca.1,uc010zpa.1,uc010zpb.1_5end | |||
|coexpression_cluster_id=C2408 | |||
|description=CAGE_peak_1_at_DTYMK_5end | |||
|id=chr2:242626195..242626243,- | |||
|ontology_enrichment_celltype=CL:0000548!1.59e-29!679;CL:0000004!1.59e-29!679;CL:0000255!1.59e-29!679;CL:0000012!6.32e-29!682;CL:0002321!1.58e-23!248;CL:0000066!2.21e-23!254;CL:0000220!3.27e-23!246;CL:0000003!4.82e-19!722;CL:0000055!1.81e-16!180;CL:0000144!1.14e-14!625;CL:0000222!1.15e-12!119;CL:0002371!8.94e-12!591;CL:0000333!5.93e-10!41;CL:0000063!2.27e-09!578;CL:0000221!1.22e-08!71;CL:0002078!1.37e-08!44;CL:0000133!1.56e-08!59;CL:1000449!1.61e-07!16;CL:0000213!1.71e-07!57;CL:0000215!1.71e-07!57;CL:0000115!2.72e-07!35;CL:1000497!7.52e-07!18;CL:0002518!7.52e-07!18;CL:0000076!9.73e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.29e-08;15!CL:1000497;1.46e-07;17!CL:0002518;1.46e-07;17!CL:0002681;1.52e-07;12!CL:0002584;1.52e-07;12!CL:0000115;7.17e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.90e-24,250;CL:0000066,1.15e-23,253;CL:0000222,8.41e-13,121;CL:0000333,5.92e-10,41;CL:0002078,4.40e-09,45;CL:0000221,1.52e-08,72;CL:0000133,1.56e-08,59;CL:1000449,2.34e-08,15;CL:0000213,6.35e-08,58;CL:0000215,6.35e-08,58;CL:0000115,8.67e-08,36;CL:1000497,1.50e-07,17;CL:0002518,1.50e-07,17;CL:0002681,1.52e-07,12;CL:0002584,1.52e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.11e-22!235;DOID:14566!1.87e-22!239;DOID:0050687!4.69e-12!143;DOID:0050686!3.98e-11!137;DOID:305!6.65e-10!106;DOID:2531!7.52e-08!51;DOID:0060083!7.52e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.11e-22,235;DOID:14566,1.87e-22,239;DOID:0050687,4.69e-12,143;DOID:0050686,3.98e-11,137;DOID:305,6.65e-10,106;DOID:2531,7.52e-08,51;DOID:0060083,7.52e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0003104!4.43e-10!238;UBERON:0009142!4.43e-10!238;UBERON:0005256!5.01e-09!143;UBERON:0002100!8.45e-09!216;UBERON:0000490!1.74e-08!138;UBERON:0003914!2.95e-08!118;UBERON:0000072!1.38e-07!46;UBERON:0004211!1.61e-07!16;UBERON:0001285!1.61e-07!16;UBERON:0007684!1.61e-07!16;UBERON:0003220!1.61e-07!16;UBERON:0004208!1.61e-07!16;UBERON:0000119!1.78e-07!312;UBERON:0000487!1.93e-07!22;UBERON:0000483!7.89e-07!309;UBERON:0001851!8.54e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.29e-08;15!UBERON:0004819;2.29e-08;15!UBERON:0001285;2.29e-08;15!UBERON:0007684;2.29e-08;15!UBERON:0000353;3.75e-08;15!UBERON:0001225;1.52e-07;12!UBERON:0008987;1.52e-07;12!UBERON:0001851;1.55e-07;15!UBERON:0000487;1.89e-07;22!UBERON:0000072;3.06e-07;37!UBERON:0000490;5.49e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,3.81e-10,148;UBERON:0002100,7.93e-09,199;UBERON:0003914,1.77e-08,117;UBERON:0004211,2.34e-08,15;UBERON:0009773,2.34e-08,15;UBERON:0001231,2.34e-08,15;UBERON:0001285,2.34e-08,15;UBERON:0007684,2.34e-08,15;UBERON:0004208,2.34e-08,15;UBERON:0000353,3.76e-08,15;UBERON:0001851,1.47e-07,15;UBERON:0001225,1.52e-07,12;UBERON:0008987,1.52e-07,12;UBERON:0007503,1.79e-07,78;UBERON:0000487,1.93e-07,22;UBERON:0000119,2.21e-07,309;UBERON:0006555,2.61e-07,16;UBERON:0004819,2.61e-07,16;UBERON:0000072,3.18e-07,47;UBERON:0000483,9.68e-07,306 | |||
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| |||
|short_description=p1@DTYMK | |||
}} |
Revision as of 09:42, 21 January 2014
Short description: | p1@DTYMK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DTYMK_5end |
Coexpression cluster: | C2408_Alveolar_Renal_Mesenchymal_Mammary_chronic_Smooth_Trabecular |
Association with transcript: | 0bp_to_ENST00000464603, uc002wbz.1, uc002wca.1, uc010zpa.1, uc010zpb.1_5end |
EntrezGene: | DTYMK |
HGNC: | 3061 |
UniProt: | P23919 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.90e-24 | 250 |
epithelial cell | 1.15e-23 | 253 |
mesodermal cell | 8.41e-13 | 121 |
migratory neural crest cell | 5.92e-10 | 41 |
meso-epithelial cell | 4.40e-09 | 45 |
ectodermal cell | 1.52e-08 | 72 |
neurectodermal cell | 1.56e-08 | 59 |
epithelial cell of nephron | 2.34e-08 | 15 |
lining cell | 6.35e-08 | 58 |
barrier cell | 6.35e-08 | 58 |
endothelial cell | 8.67e-08 | 36 |
kidney cell | 1.50e-07 | 17 |
kidney epithelial cell | 1.50e-07 | 17 |
kidney cortical cell | 1.52e-07 | 12 |
renal cortical epithelial cell | 1.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 3.81e-10 | 148 |
trunk | 7.93e-09 | 199 |
epithelial tube | 1.77e-08 | 117 |
nephron epithelium | 2.34e-08 | 15 |
renal tubule | 2.34e-08 | 15 |
nephron tubule | 2.34e-08 | 15 |
nephron | 2.34e-08 | 15 |
uriniferous tubule | 2.34e-08 | 15 |
nephrogenic mesenchyme | 2.34e-08 | 15 |
parenchyma | 3.76e-08 | 15 |
cortex | 1.47e-07 | 15 |
cortex of kidney | 1.52e-07 | 12 |
renal parenchyma | 1.52e-07 | 12 |
epithelial vesicle | 1.79e-07 | 78 |
simple squamous epithelium | 1.93e-07 | 22 |
cell layer | 2.21e-07 | 309 |
excretory tube | 2.61e-07 | 16 |
kidney epithelium | 2.61e-07 | 16 |
segment of respiratory tract | 3.18e-07 | 47 |
epithelium | 9.68e-07 | 306 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.11e-22 | 235 |
disease of cellular proliferation | 1.87e-22 | 239 |
cell type cancer | 4.69e-12 | 143 |
organ system cancer | 3.98e-11 | 137 |
carcinoma | 6.65e-10 | 106 |
hematologic cancer | 7.52e-08 | 51 |
immune system cancer | 7.52e-08 | 51 |