FFCP PHASE1:Hg19::chr2:216274317..216274350,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=322bp_to_ENST00000471193_5end | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_43_at_FN1_5end | |||
|id=chr2:216274317..216274350,- | |||
|ontology_enrichment_celltype=CL:0000055!4.09e-33!180;CL:0000057!1.13e-24!75;CL:0000680!1.71e-13!57;CL:0000056!1.71e-13!57;CL:0000355!1.71e-13!57;CL:0000183!2.79e-13!59;CL:0002371!1.79e-12!591;CL:0000187!3.62e-12!54;CL:0000144!8.42e-11!625;CL:0000393!1.63e-09!60;CL:0000211!1.63e-09!60;CL:0002620!9.93e-09!23;CL:0002334!2.41e-08!12;CL:0000192!2.66e-08!42;CL:0000514!2.66e-08!42;CL:0002494!3.96e-08!16;CL:0002321!6.07e-08!248;CL:0000048!6.65e-08!430;CL:0000220!6.98e-08!246;CL:0000359!1.15e-07!32;CL:0000723!1.28e-07!436;CL:0000034!1.66e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000723;8.32e-12;61!CL:0000134;8.40e-12;55!CL:0002620;6.21e-11;23!CL:0000057;1.06e-10;73!CL:0000048;3.15e-10;58!CL:0002334;3.28e-10;12!CL:0002320;5.28e-10;188!CL:0002494;1.97e-08;16!CL:0000499;2.54e-08;28!CL:0000034;3.06e-08;69!CL:0000187;6.76e-07;55!CL:0000349;6.78e-07;19!CL:0000327;9.16e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.22e-29,76;CL:0000048,3.37e-19,427;CL:0000723,3.75e-18,433;CL:0000034,3.61e-17,441;CL:0002320,6.10e-12,361;CL:0000680,8.97e-12,58;CL:0000056,8.97e-12,58;CL:0000355,8.97e-12,58;CL:0002620,1.03e-10,23;CL:0000187,2.75e-10,55;CL:0002334,2.90e-10,12;CL:0000134,3.97e-10,354;CL:0000499,2.15e-08,28;CL:0002494,2.53e-08,16;CL:0000393,3.69e-08,61;CL:0000211,3.69e-08,61;CL:0000219,1.06e-07,386;CL:0000349,6.36e-07,19;CL:0000327,6.97e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;3.66e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.22e-15!83;UBERON:0002329!1.22e-15!83;UBERON:0003077!1.22e-15!83;UBERON:0003059!1.22e-15!83;UBERON:0007282!1.22e-15!83;UBERON:0009618!1.22e-15!83;UBERON:0007285!1.22e-15!83;UBERON:0005256!4.21e-15!143;UBERON:0004290!1.61e-13!70;UBERON:0000486!1.11e-12!82;UBERON:0004872!4.09e-12!84;UBERON:0001134!5.25e-12!61;UBERON:0002036!5.25e-12!61;UBERON:0003082!5.25e-12!61;UBERON:0003914!7.27e-12!118;UBERON:0002385!1.35e-11!63;UBERON:0001015!1.35e-11!63;UBERON:0000383!1.35e-11!63;UBERON:0002100!9.93e-10!216;UBERON:0002049!1.47e-09!79;UBERON:0007798!1.47e-09!79;UBERON:0000490!2.00e-09!138;UBERON:0000468!4.05e-09!659;UBERON:0001637!4.41e-09!42;UBERON:0003509!4.41e-09!42;UBERON:0004572!4.41e-09!42;UBERON:0003102!5.29e-09!95;UBERON:0000475!6.76e-09!365;UBERON:0004535!8.45e-09!110;UBERON:0001009!1.67e-08!113;UBERON:0000948!2.33e-08!24;UBERON:0005498!2.33e-08!24;UBERON:0004140!2.33e-08!24;UBERON:0009881!2.33e-08!24;UBERON:0004141!2.33e-08!24;UBERON:0003084!2.33e-08!24;UBERON:0007005!2.33e-08!24;UBERON:0004139!2.33e-08!24;UBERON:0004291!2.33e-08!24;UBERON:0002199!2.81e-08!45;UBERON:0002416!2.81e-08!45;UBERON:0000119!3.40e-08!312;UBERON:0000483!1.06e-07!309;UBERON:0000055!1.51e-07!69;UBERON:0004923!1.64e-07!57;UBERON:0007100!2.14e-07!27;UBERON:0001981!2.26e-07!60;UBERON:0007500!2.26e-07!60;UBERON:0004537!2.26e-07!60;UBERON:0006965!2.26e-07!60;UBERON:0004573!4.83e-07!33;UBERON:0004571!4.83e-07!33;UBERON:0002097!7.85e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;7.62e-09;198!UBERON:0001013;6.76e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.20e-13,73;UBERON:0002329,5.40e-13,71;UBERON:0003059,5.40e-13,71;UBERON:0007282,5.40e-13,71;UBERON:0004290,5.40e-13,71;UBERON:0009618,5.40e-13,71;UBERON:0007503,7.94e-13,78;UBERON:0003077,1.35e-12,72;UBERON:0007285,1.35e-12,72;UBERON:0002384,2.46e-12,371;UBERON:0000486,5.54e-12,83;UBERON:0005256,1.62e-11,122;UBERON:0001134,8.28e-11,62;UBERON:0002036,8.28e-11,62;UBERON:0003082,8.28e-11,62;UBERON:0003104,2.38e-10,160;UBERON:0009142,2.38e-10,160;UBERON:0002385,4.56e-10,64;UBERON:0001015,4.56e-10,64;UBERON:0000383,4.56e-10,64;UBERON:0002199,1.40e-09,46;UBERON:0002416,1.40e-09,46;UBERON:0003102,2.01e-08,99;UBERON:0004872,3.87e-08,83;UBERON:0000926,5.18e-08,315;UBERON:0004120,5.18e-08,315;UBERON:0006603,5.18e-08,315;UBERON:0004923,7.86e-08,66;UBERON:0001013,8.81e-08,14;UBERON:0002097,8.94e-08,41;UBERON:0000948,1.76e-07,24;UBERON:0005498,1.76e-07,24;UBERON:0004140,1.76e-07,24;UBERON:0009881,1.76e-07,24;UBERON:0004141,1.76e-07,24;UBERON:0003084,1.76e-07,24;UBERON:0007005,1.76e-07,24;UBERON:0004139,1.76e-07,24;UBERON:0004291,1.76e-07,24;UBERON:0003914,6.83e-07,117 | |||
|phase1_expression=5.4503513781167,15.4152377201508,5.07435854745496,16.0117277365009,4.46961094427288,14.8297549097063,2.53299878168311,1.26343974685366,1.04474251279935,0.737201809504527,0,3.27662058195258,4.74780560811216,1.23766352960047,4.63956326019082,5.3786011716142,2.41077811209591,1.46062018077475,3.41552959153355,0.246242116153576,1.83600622119828,0,0,0.410623275218653,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,75.5801285573281,6.70700859703636,2.30152611318355,3.97583067623023,4.01070328508712,3.18662341713812,46.1265849289638,67.6422469720664,0.567208902984407,1.33037638477538,1.22968699970376,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,1.25849830862972,0.825354125820202,0.835979866147242,0.258416759169329,0.35576626268671,1.00416183829401,0,0,0.24406205754817,0,6.48113558305408,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,11.4303548889923,6.33152558322899,15.756692516773,36.1414142143505,4.61068896857864,3.92474320099615,3.20246987189115,10.3600370335207,7.78027588499416,7.13966561969347,3.10577615915572,11.8058793563046,17.2852777344,0.468642863667593,8.11616199758833,0,6.87463930538285,3.05329696473789,1.29498355494505,1.26405726032024,0.816616685019573,2.08818339430006,2.89312187292143,1.18800285728205,3.70900393917835,5.46096817162816,2.87447256726495,0.673344455816265,3.503318556415,1.10825646193673,2.19488810440419,3.0648779579902,1.65261864797256,2.94923676216055,12.0191055911538,2.13557388818567,7.84148034290379,12.9039171316293,5.35873152039882,17.2619161830572,3.16398655763703,9.78902726999344,8.76933046450788,18.1752317455762,3.95814564161887,6.14255015911485,17.3954700333141,3.62707553619505,1.01736355386293,1.35282597214308,1.36373060295417,0.286804595389004,0.487894824518382,0.132529768321485,0.580969714347592,0.518305275076852,1.00928340350251,0,6.25798129319264,7.71889125831462,0,14.8597736970233,5.77503585335668,0,0,0,0,0,0,0,0,0,0,0,2.8810180793198,2.94017422771084,3.80265104465493,0.982827216677626,0.590789906681404,0,0.368965315629341,0.686271241194102,0.98775256867763,0,0.100528972411631,0.370353780634118,1.62904152655162,2.07986957055916,0,0,5.16598254637615,0.721832238805369,0,0.761016608938393,0,0,0,0,0,0,2.85569617938061,0.425325291727159,4.20925056703387,2.03443756959773,2.68367875415648,0,0,0,0,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0.616964956219941,0.300343057843917,0.285826432630578,1.34557301214433,4.79556075716608,1.39342743059805,2.97324946242889,21.4593867511129,4.22651376278,0.797814349754612,0,2.31486636835928,1.41849132023278,3.46348832720929,1.71573592389777,3.25572963234866,0.823240336780769,1.62868092146868,1.42156779497018,2.37585561880029,1.80863626235752,2.61460037580088,0.799783929456456,0,0,0,4.55287225434007,8.04033550838797,0,6.08081488003833,10.0683398049688,2.86497541183833,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,2.20844685094452,8.00272833695483,3.7977103317963,10.814484799602,20.5193337116736,6.15039418632345,7.1456263145555,3.31040709700491,0,5.17365356462525,3.98535359121262,6.63729006750131,2.60650843404249,2.34961388955289,2.74514739048685,0,0,0,0,1.66435439510497,6.04780586659361,11.164851351845,16.5738931151107,25.5400685934097,6.27881831352935,7.16390148693385,14.4768529029247,10.3892646511494,8.63574285294871,7.45759246315134,2.54594183642808,3.63478100428535,3.7187321107187,1.20859449591622,8.42127175273796,0,0.803701137152247,2.00300284807389,2.75361271414791,0.451199612907412,0.693138033939733,0,1.46139224653261,0.422206515571503,1.13733384070897,0.850468526382578,1.72732732881711,0,1.89662506280697,1.50506932156456,0.254876273045038,0,0,0,0,0,1.31205858279882,0.325378394664303,1.03041011647722,0.0915694648183434,0,0.574265537996172,2.60024098414608,1.6068392984416,2.51343867559517,4.46740989632469,7.52168006158035,3.99726060205139,5.37101224341368,10.4412019618245,4.77269113530165,1.4245125703478,2.47927373041467,1.53752053892085,3.06270509987002,2.32662895967765,3.253918845081,40.2959803943219,0,3.69640296211307,1.59691809095107,0,1.66791797193528,0.858749320451947,0.372158369359667,4.42931194606216,1.90630193923825,0.767693373934002,3.42351190427136,0.95460974377781,5.49464048139461,0.539617372749944,1.09814811894422,1.41374882814824,0.606547444719948,3.17020642346017,0.842516912477962,0.48763373908959,2.92456187557541,1.05650146756755,0.818999468447914,1.41405431953713,12.4308928282267,1.10273068709225,3.3171948762061,0.876901770507525,2.89387767133344,1.9676842561399,2.84074527747786,0.6196469961995,1.12678241012897,1.29070216983646,1.76848273823618,5.7067368237,0,2.32218398827431,8.89096210991735,0,1.04980416073495,0,0,1.08890984861323,0.941438007767792,0,0,0,1.608063801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| |||
|short_description=p43@FN1 | |||
}} |
Revision as of 08:24, 21 January 2014
Short description: | p43@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 322bp_to_ENST00000471193_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.22e-29 | 76 |
multi fate stem cell | 3.37e-19 | 427 |
somatic stem cell | 3.75e-18 | 433 |
stem cell | 3.61e-17 | 441 |
connective tissue cell | 6.10e-12 | 361 |
muscle precursor cell | 8.97e-12 | 58 |
myoblast | 8.97e-12 | 58 |
multi-potent skeletal muscle stem cell | 8.97e-12 | 58 |
skin fibroblast | 1.03e-10 | 23 |
muscle cell | 2.75e-10 | 55 |
preadipocyte | 2.90e-10 | 12 |
mesenchymal cell | 3.97e-10 | 354 |
stromal cell | 2.15e-08 | 28 |
cardiocyte | 2.53e-08 | 16 |
electrically responsive cell | 3.69e-08 | 61 |
electrically active cell | 3.69e-08 | 61 |
motile cell | 1.06e-07 | 386 |
extraembryonic cell | 6.36e-07 | 19 |
extracellular matrix secreting cell | 6.97e-07 | 15 |