FFCP PHASE1:Hg19::chr2:216259313..216259329,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3778 | |||
|TSSclassifier=strong | |||
|UniProt=P02751 | |||
|association_with_transcript=7bp_to_U42593_5end | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_46_at_FN1_5end | |||
|id=chr2:216259313..216259329,- | |||
|ontology_enrichment_celltype=CL:0000055!4.38e-31!180;CL:0000057!4.39e-22!75;CL:0000680!4.47e-15!57;CL:0000056!4.47e-15!57;CL:0000355!4.47e-15!57;CL:0000183!2.25e-14!59;CL:0002371!3.66e-14!591;CL:0000187!1.02e-13!54;CL:0000144!1.53e-12!625;CL:0000393!2.61e-11!60;CL:0000211!2.61e-11!60;CL:0002620!7.33e-10!23;CL:0000222!9.61e-10!119;CL:0000048!1.07e-09!430;CL:0000220!1.24e-09!246;CL:0002321!1.90e-09!248;CL:0000723!2.81e-09!436;CL:0000192!2.91e-09!42;CL:0000514!2.91e-09!42;CL:0000359!6.88e-09!32;CL:0000034!1.11e-08!444;CL:0002334!2.79e-08!12;CL:0000548!5.53e-08!679;CL:0000004!5.53e-08!679;CL:0000255!5.53e-08!679;CL:0000012!1.53e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000134;2.79e-13;55!CL:0000723;2.90e-12;61!CL:0002620;2.67e-11;23!CL:0000048;1.11e-10;58!CL:0000349;2.55e-10;19!CL:0002334;2.96e-10;12!CL:0000359;1.17e-09;32!CL:0000057;4.41e-09;73!CL:0000034;5.40e-09;69!CL:0002320;8.39e-09;188!CL:0000187;1.26e-08;55!CL:0002494;4.18e-07;16!CL:0002570;8.64e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.02e-24,76;CL:0000048,3.36e-21,427;CL:0000723,1.19e-20,433;CL:0000034,2.70e-19,441;CL:0000680,7.06e-16,58;CL:0000056,7.06e-16,58;CL:0000355,7.06e-16,58;CL:0000187,3.42e-14,55;CL:0000393,1.60e-11,61;CL:0000211,1.60e-11,61;CL:0002620,2.03e-11,23;CL:0002320,4.49e-11,361;CL:0002334,1.70e-10,12;CL:0000349,3.02e-10,19;CL:0000134,6.67e-10,354;CL:0000359,1.36e-09,32;CL:0000192,1.00e-08,43;CL:0000514,1.00e-08,43;CL:0000219,1.95e-07,386;CL:0002494,4.16e-07,16;CL:0002570,6.25e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000355;5.13e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.65e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!5.21e-20!143;UBERON:0000914!3.28e-19!83;UBERON:0002329!3.28e-19!83;UBERON:0003077!3.28e-19!83;UBERON:0003059!3.28e-19!83;UBERON:0007282!3.28e-19!83;UBERON:0009618!3.28e-19!83;UBERON:0007285!3.28e-19!83;UBERON:0004290!8.82e-18!70;UBERON:0000486!6.56e-16!82;UBERON:0004872!3.35e-15!84;UBERON:0002385!7.47e-15!63;UBERON:0001015!7.47e-15!63;UBERON:0000383!7.47e-15!63;UBERON:0003914!8.11e-15!118;UBERON:0001134!1.01e-14!61;UBERON:0002036!1.01e-14!61;UBERON:0003082!1.01e-14!61;UBERON:0002100!8.10e-13!216;UBERON:0000490!1.53e-12!138;UBERON:0002049!9.19e-12!79;UBERON:0007798!9.19e-12!79;UBERON:0001009!7.84e-11!113;UBERON:0001637!8.25e-11!42;UBERON:0003509!8.25e-11!42;UBERON:0004572!8.25e-11!42;UBERON:0004535!9.10e-11!110;UBERON:0004923!1.51e-09!57;UBERON:0001981!1.81e-09!60;UBERON:0007500!1.81e-09!60;UBERON:0004537!1.81e-09!60;UBERON:0006965!1.81e-09!60;UBERON:0000055!2.63e-09!69;UBERON:0002199!5.80e-09!45;UBERON:0002416!5.80e-09!45;UBERON:0003102!1.23e-08!95;UBERON:0004573!2.23e-08!33;UBERON:0004571!2.23e-08!33;UBERON:0003104!5.64e-08!238;UBERON:0009142!5.64e-08!238;UBERON:0000468!9.79e-08!659;UBERON:0000475!1.13e-07!365;UBERON:0002097!1.67e-07!40;UBERON:0000926!2.67e-07!448;UBERON:0004120!2.67e-07!448;UBERON:0006603!2.67e-07!448;UBERON:0000948!3.46e-07!24;UBERON:0005498!3.46e-07!24;UBERON:0004140!3.46e-07!24;UBERON:0009881!3.46e-07!24;UBERON:0004141!3.46e-07!24;UBERON:0003084!3.46e-07!24;UBERON:0007005!3.46e-07!24;UBERON:0004139!3.46e-07!24;UBERON:0004291!3.46e-07!24;UBERON:0005631!3.49e-07!14;UBERON:0000158!3.49e-07!14;UBERON:0000947!5.18e-07!21;UBERON:0010191!5.18e-07!21;UBERON:0007100!5.47e-07!27;UBERON:0000119!7.58e-07!312;UBERON:0001013!9.84e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.32e-08;31!UBERON:0001015;2.32e-08;31!UBERON:0000383;2.32e-08;31!UBERON:0002384;4.11e-08;198!UBERON:0000478;5.43e-08;24!UBERON:0001637;1.46e-07;42!UBERON:0003509;1.46e-07;42!UBERON:0004572;1.46e-07;42!UBERON:0004573;2.55e-07;33!UBERON:0004571;2.55e-07;33!UBERON:0002097;3.95e-07;41!UBERON:0001013;4.32e-07;14!UBERON:0002199;4.92e-07;46!UBERON:0002416;4.92e-07;46!UBERON:0002204;5.74e-07;70!UBERON:0000947;7.50e-07;21!UBERON:0010191;7.50e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.09e-18,73;UBERON:0002329,1.27e-18,71;UBERON:0003059,1.27e-18,71;UBERON:0007282,1.27e-18,71;UBERON:0004290,1.27e-18,71;UBERON:0009618,1.27e-18,71;UBERON:0003077,4.07e-18,72;UBERON:0007285,4.07e-18,72;UBERON:0007503,7.93e-18,78;UBERON:0005256,3.80e-17,122;UBERON:0000486,5.86e-16,83;UBERON:0001134,2.08e-15,62;UBERON:0002036,2.08e-15,62;UBERON:0003082,2.08e-15,62;UBERON:0002385,2.77e-15,64;UBERON:0001015,2.77e-15,64;UBERON:0000383,2.77e-15,64;UBERON:0003104,8.56e-15,160;UBERON:0009142,8.56e-15,160;UBERON:0000926,1.67e-12,315;UBERON:0004120,1.67e-12,315;UBERON:0006603,1.67e-12,315;UBERON:0002384,2.57e-11,371;UBERON:0004872,3.14e-11,83;UBERON:0000490,4.80e-11,148;UBERON:0002199,1.13e-10,46;UBERON:0002416,1.13e-10,46;UBERON:0001637,2.83e-10,42;UBERON:0003509,2.83e-10,42;UBERON:0004572,2.83e-10,42;UBERON:0003914,2.60e-09,117;UBERON:0002097,2.82e-09,41;UBERON:0002100,5.76e-09,199;UBERON:0000478,5.38e-08,24;UBERON:0004573,1.05e-07,33;UBERON:0004571,1.05e-07,33;UBERON:0004535,1.34e-07,109;UBERON:0004923,1.85e-07,66;UBERON:0005631,2.05e-07,14;UBERON:0000158,2.05e-07,14;UBERON:0002049,2.21e-07,78;UBERON:0007798,2.21e-07,78;UBERON:0001013,3.71e-07,14;UBERON:0001009,4.93e-07,112 | |||
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| |||
|short_description=p46@FN1 | |||
}} |
Revision as of 08:23, 21 January 2014
Short description: | p46@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_46_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 7bp_to_U42593_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | P02751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.02e-24 | 76 |
multi fate stem cell | 3.36e-21 | 427 |
somatic stem cell | 1.19e-20 | 433 |
stem cell | 2.70e-19 | 441 |
muscle precursor cell | 7.06e-16 | 58 |
myoblast | 7.06e-16 | 58 |
multi-potent skeletal muscle stem cell | 7.06e-16 | 58 |
muscle cell | 3.42e-14 | 55 |
electrically responsive cell | 1.60e-11 | 61 |
electrically active cell | 1.60e-11 | 61 |
skin fibroblast | 2.03e-11 | 23 |
connective tissue cell | 4.49e-11 | 361 |
preadipocyte | 1.70e-10 | 12 |
extraembryonic cell | 3.02e-10 | 19 |
mesenchymal cell | 6.67e-10 | 354 |
vascular associated smooth muscle cell | 1.36e-09 | 32 |
smooth muscle cell | 1.00e-08 | 43 |
smooth muscle myoblast | 1.00e-08 | 43 |
motile cell | 1.95e-07 | 386 |
cardiocyte | 4.16e-07 | 16 |
mesenchymal stem cell of adipose | 6.25e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.65e-07 | 14 |