FFCP PHASE1:Hg19::chr2:216245602..216245652,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=399bp_to_ENST00000474036_5end | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_33_at_FN1_5end | |||
|id=chr2:216245602..216245652,- | |||
|ontology_enrichment_celltype=CL:0000055!9.39e-43!180;CL:0000057!1.74e-26!75;CL:0002371!1.24e-19!591;CL:0000680!1.89e-18!57;CL:0000056!1.89e-18!57;CL:0000355!1.89e-18!57;CL:0000183!4.99e-18!59;CL:0000187!4.04e-17!54;CL:0000144!4.14e-17!625;CL:0000393!1.42e-14!60;CL:0000211!1.42e-14!60;CL:0000220!3.62e-12!246;CL:0002321!6.63e-12!248;CL:0000222!6.98e-12!119;CL:0000192!9.27e-12!42;CL:0000514!9.27e-12!42;CL:0000548!2.02e-11!679;CL:0000004!2.02e-11!679;CL:0000255!2.02e-11!679;CL:0000012!7.36e-11!682;CL:0002620!7.93e-11!23;CL:0000048!1.37e-10!430;CL:0000723!4.79e-10!436;CL:0000034!1.27e-09!444;CL:0000359!1.83e-09!32;CL:0002494!2.44e-08!16;CL:0002334!2.53e-07!12;CL:0000499!2.98e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.63e-14;55!CL:0000723;5.30e-13;61!CL:0000057;6.89e-12;73!CL:0002620;8.09e-12;23!CL:0000048;8.38e-12;58!CL:0000187;2.77e-11;55!CL:0002320;1.92e-10;188!CL:0000349;5.48e-10;19!CL:0000359;7.06e-10;32!CL:0002494;9.74e-10;16!CL:0000034;1.14e-09;69!CL:0000192;1.95e-09;43!CL:0000393;1.52e-08;61!CL:0000211;1.52e-08;61!CL:0002334;2.10e-08;12!CL:0000499;2.82e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.13e-29,76;CL:0000048,1.09e-21,427;CL:0000723,6.59e-21,433;CL:0000680,9.30e-21,58;CL:0000056,9.30e-21,58;CL:0000355,9.30e-21,58;CL:0000034,5.11e-20,441;CL:0000187,3.38e-19,55;CL:0000393,1.72e-15,61;CL:0000211,1.72e-15,61;CL:0000192,6.13e-13,43;CL:0000514,6.13e-13,43;CL:0002620,7.91e-12,23;CL:0000359,2.61e-10,32;CL:0000349,4.38e-10,19;CL:0002320,4.46e-10,361;CL:0002494,1.38e-09,16;CL:0000222,2.25e-09,121;CL:0000499,2.15e-08,28;CL:0002334,2.19e-08,12;CL:0000134,2.19e-08,354;CL:0002321,4.55e-08,250;CL:0000219,4.44e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000355;2.21e-11;58!CL:0000514;1.95e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.29e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.24e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.40e-22!83;UBERON:0002329!7.40e-22!83;UBERON:0003077!7.40e-22!83;UBERON:0003059!7.40e-22!83;UBERON:0007282!7.40e-22!83;UBERON:0009618!7.40e-22!83;UBERON:0007285!7.40e-22!83;UBERON:0005256!2.36e-20!143;UBERON:0004290!4.67e-20!70;UBERON:0000486!1.02e-19!82;UBERON:0001134!1.06e-16!61;UBERON:0002036!1.06e-16!61;UBERON:0003082!1.06e-16!61;UBERON:0002385!1.58e-16!63;UBERON:0001015!1.58e-16!63;UBERON:0000383!1.58e-16!63;UBERON:0000490!9.68e-14!138;UBERON:0003914!1.04e-12!118;UBERON:0004872!6.15e-12!84;UBERON:0002100!1.21e-11!216;UBERON:0002049!6.37e-11!79;UBERON:0007798!6.37e-11!79;UBERON:0001637!2.63e-10!42;UBERON:0003509!2.63e-10!42;UBERON:0004572!2.63e-10!42;UBERON:0002199!8.13e-10!45;UBERON:0002416!8.13e-10!45;UBERON:0004535!9.05e-10!110;UBERON:0001009!1.90e-09!113;UBERON:0003102!2.60e-09!95;UBERON:0002097!3.39e-09!40;UBERON:0000119!1.02e-08!312;UBERON:0000483!3.07e-08!309;UBERON:0000468!3.10e-08!659;UBERON:0000475!3.81e-08!365;UBERON:0000055!5.01e-08!69;UBERON:0001981!5.61e-08!60;UBERON:0007500!5.61e-08!60;UBERON:0004537!5.61e-08!60;UBERON:0006965!5.61e-08!60;UBERON:0004573!1.37e-07!33;UBERON:0004571!1.37e-07!33;UBERON:0004923!2.32e-07!57;UBERON:0003104!4.37e-07!238;UBERON:0009142!4.37e-07!238;UBERON:0005631!5.18e-07!14;UBERON:0000158!5.18e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.09e-09;198!UBERON:0002097;1.08e-07;41!UBERON:0001637;1.57e-07;42!UBERON:0003509;1.57e-07;42!UBERON:0004572;1.57e-07;42!UBERON:0000478;2.39e-07;24!UBERON:0002199;2.67e-07;46!UBERON:0002416;2.67e-07;46!UBERON:0002385;2.88e-07;31!UBERON:0001015;2.88e-07;31!UBERON:0000383;2.88e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.67e-22,73;UBERON:0002329,4.84e-22,71;UBERON:0003059,4.84e-22,71;UBERON:0007282,4.84e-22,71;UBERON:0004290,4.84e-22,71;UBERON:0009618,4.84e-22,71;UBERON:0007503,1.72e-21,78;UBERON:0003077,2.08e-21,72;UBERON:0007285,2.08e-21,72;UBERON:0000486,1.99e-19,83;UBERON:0001134,4.02e-18,62;UBERON:0002036,4.02e-18,62;UBERON:0003082,4.02e-18,62;UBERON:0002385,1.31e-17,64;UBERON:0001015,1.31e-17,64;UBERON:0000383,1.31e-17,64;UBERON:0005256,1.36e-17,122;UBERON:0003104,2.27e-16,160;UBERON:0009142,2.27e-16,160;UBERON:0000490,2.85e-15,148;UBERON:0002199,7.43e-11,46;UBERON:0002416,7.43e-11,46;UBERON:0004872,2.01e-10,83;UBERON:0002384,2.02e-10,371;UBERON:0001637,3.58e-10,42;UBERON:0003509,3.58e-10,42;UBERON:0004572,3.58e-10,42;UBERON:0000926,5.19e-10,315;UBERON:0004120,5.19e-10,315;UBERON:0006603,5.19e-10,315;UBERON:0002097,5.60e-10,41;UBERON:0003914,1.98e-09,117;UBERON:0003102,4.47e-09,99;UBERON:0004535,5.09e-09,109;UBERON:0002049,5.43e-09,78;UBERON:0007798,5.43e-09,78;UBERON:0002100,2.35e-08,199;UBERON:0004923,2.46e-08,66;UBERON:0001009,2.70e-08,112;UBERON:0000478,1.91e-07,24;UBERON:0005631,2.96e-07,14;UBERON:0000158,2.96e-07,14;UBERON:0004573,4.28e-07,33;UBERON:0004571,4.28e-07,33 | |||
|phase1_expression=5.63202975738726,14.7729361484778,6.06103937612676,2.00146596706261,0.893922188854576,9.59572376510406,0,2.52687949370732,1.04474251279935,2.21160542851358,0.697801167972428,9.82986174585775,17.6723875413064,5.94078494208224,6.62794751455832,7.39557661096953,5.42425075221579,8.03341099426111,8.78279037822912,1.35433163884467,2.24400760368678,1.56727360739044,0.572471974262113,0.821246550437305,2.25976751270645,0.0764134057479513,0,0,0,0,0,0,0.6024118375565,1.10926203050036,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,70.7039912310489,29.51083782696,6.00954040664593,2.89151321907653,3.50936537445123,4.20054904986389,38.9690114055039,21.8985691636186,0.567208902984407,3.99112915432615,3.07421749925941,0,0,0,0,0,0.398873881556595,0,0,0,0.596287222100115,0,0.347140501607594,4.52246353539208,2.09749718104953,4.95212475492121,2.29894463190492,0,1.77883131343355,0.33472061276467,0.402829317109147,0,1.22031028774085,0,6.48113558305408,0.982297011124877,0.22452937262617,0.563057402416611,0,0,1.46561395144326,0,0,0.436094052142534,27.8304292949378,13.4228342364455,26.4818361626438,50.4832452517912,14.1867352879343,8.41016400213461,20.2823091886439,23.6800846480474,5.91300967259556,10.1033004052266,6.21155231831143,16.9520318962323,39.7561387891199,0.937285727335186,14.0472034573644,3.99330275081114,12.4042404857995,3.75790395660048,3.23745888736263,3.08991774744947,3.26646674007829,5.77321291365309,5.3729406211398,1.18800285728205,5.93440630268536,6.37112953356618,5.03032699271367,4.88174730466792,5.50521487436642,1.6623846929051,3.07284334616587,11.9530240361618,4.35690370829131,8.16711718752151,20.6298081042191,8.11518077510556,18.2261434997223,20.4061945337394,5.77094163735258,20.6112432036503,7.81690796592677,16.0337515629203,8.47701944902428,31.0493542320261,7.45604179002625,9.21382523867228,24.4956618836464,3.42557133973977,5.76506013855658,2.51239109112286,1.90922284413584,0.286804595389004,0.121973706129595,0,1.2781333715647,0.725627385107593,1.26160425437814,0,12.5159625863853,21.8701918985581,4.14404764057442,18.5747171212792,10.8281922250438,0.118306800039844,0,0,0,0,0,0,0,0,0,4.20725321410337,9.0546282492908,19.1111324801205,0,2.94848165003288,0,0,1.72183813960359,2.05881372358231,2.96325770603289,0,0,0.185176890317059,0,1.03993478527958,4.3299402607582,0,6.80970426567766,0.433099343283221,1.85194205030644,1.71228737011138,0,0,0,0,0,0,3.52762469217605,0.425325291727159,7.7915914751478,5.23141089325132,7.28427090413901,0,0,0,0,0,0.063497894292169,0.381988425558278,0,1.71072446022705,2.57068731758309,0.600686115687835,0,1.79409734952577,6.97536110133248,3.8135908626894,4.91232519879556,28.6125156681506,13.524844040896,2.92531928243358,2.08014873822732,7.45901385360212,1.41849132023278,6.66055447540248,1.85871391755592,14.1081617401775,9.87888404136923,3.58309802723109,2.13235169245527,6.33561498346743,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,15.5756156069529,5.7430967917057,4.27910715122155,4.92256442669769,14.1778662559765,8.77398719875488,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,5.39842563564216,23.0078439687451,8.13795071099207,14.7659311686873,30.6897860731118,10.7237642223076,11.4798586692859,3.91229929646035,6.82222512167955,9.31257641632544,11.2918351751024,10.6934117754188,5.99496939829772,3.32861967686659,6.86286847621712,0,0,0,0.909382714338778,11.6504807657348,9.97887967987945,18.856193394227,16.7273550883988,27.2240291600081,12.0450800300359,17.9097537173346,16.8896617200788,1.48418066444991,15.5751790740682,15.9805552781814,5.17401082886998,6.23105315020345,4.76462551685833,1.69203229428271,23.0582440848778,0,2.29628896329214,6.55528204824181,8.1297137274843,0.451199612907412,1.23224539367064,0,2.92278449306521,1.37217117560738,0,0.680374821106063,6.90930931526846,4.62681758070868,3.25135725052623,3.01013864312912,0,0.831076008928724,0.671624264166535,0,0,0,1.31205858279882,0.325378394664303,0.9273691048295,0.457847324091717,0.082509499920588,4.59412430396938,1.30012049207304,0,4.73686519631398,8.3186253241908,6.90766536267583,4.82428003695857,18.04660113787,19.4322369845066,11.6760479560058,5.51998621009772,9.42124017557575,5.57351195358808,6.12541019974004,4.34978457678865,3.71876439437829,53.8329113080395,1.3940745403212,1.84820148105653,4.25844824253617,0.869932992075073,5.93037501132544,1.86062352764589,3.72158369359667,11.0732798651554,4.19386426632415,2.04718233049067,7.70290178461057,2.22742273548156,4.70969184119538,3.41757669408298,3.29444435683266,3.53437207037059,2.02182481573316,3.17020642346017,2.10629228119491,2.43816869544795,3.65570234446927,1.05650146756755,2.72999822815972,6.78746073377821,9.04064932961942,2.2054613741845,2.65375590096488,5.26141062304515,10.9967351510671,10.4943160327461,7.10186319369464,3.40805847909725,4.22543403798362,2.29458163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| |||
|short_description=p33@FN1 | |||
}} |
Revision as of 08:20, 21 January 2014
Short description: | p33@FN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 399bp_to_ENST00000474036_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.13e-29 | 76 |
multi fate stem cell | 1.09e-21 | 427 |
somatic stem cell | 6.59e-21 | 433 |
muscle precursor cell | 9.30e-21 | 58 |
myoblast | 9.30e-21 | 58 |
multi-potent skeletal muscle stem cell | 9.30e-21 | 58 |
stem cell | 5.11e-20 | 441 |
muscle cell | 3.38e-19 | 55 |
electrically responsive cell | 1.72e-15 | 61 |
electrically active cell | 1.72e-15 | 61 |
smooth muscle cell | 6.13e-13 | 43 |
smooth muscle myoblast | 6.13e-13 | 43 |
skin fibroblast | 7.91e-12 | 23 |
vascular associated smooth muscle cell | 2.61e-10 | 32 |
extraembryonic cell | 4.38e-10 | 19 |
connective tissue cell | 4.46e-10 | 361 |
cardiocyte | 1.38e-09 | 16 |
mesodermal cell | 2.25e-09 | 121 |
stromal cell | 2.15e-08 | 28 |
preadipocyte | 2.19e-08 | 12 |
mesenchymal cell | 2.19e-08 | 354 |
embryonic cell | 4.55e-08 | 250 |
motile cell | 4.44e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.24e-07 | 14 |