FFCP PHASE1:Hg19::chr2:21231633..21231648,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |||
|TSSclassifier=weak | |||
|UniProt=Q13789 | |||
|association_with_transcript=-117bp_to_X03324_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_15_at_APOB_5end | |||
|id=chr2:21231633..21231648,- | |||
|ontology_enrichment_celltype=CL:0000181!3.85e-37!12;CL:0000417!3.85e-37!12;CL:0000668!3.85e-37!12;CL:0000414!3.85e-37!12;CL:0000412!3.85e-37!12;CL:0000182!3.85e-37!12;CL:0000223!5.43e-14!59;CL:0002561!3.01e-10!1;CL:0002563!8.56e-10!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.62e-43;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.62e-43,12;CL:0000223,1.08e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.17e-32;11!UBERON:0009497;1.96e-27;13!UBERON:0001041;6.34e-12;30!UBERON:0003104;1.60e-11;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.50e-38!23;UBERON:0002107!3.09e-38!19;UBERON:0006925!3.09e-38!19;UBERON:0008836!3.09e-38!19;UBERON:0009856!6.09e-34!26;UBERON:0008835!7.24e-33!22;UBERON:0003894!7.24e-33!22;UBERON:0007499!8.78e-29!25;UBERON:0009497!8.78e-29!25;UBERON:0000015!8.78e-29!25;UBERON:0002423!8.78e-29!25;UBERON:0006235!8.78e-29!25;UBERON:0004161!8.78e-29!25;UBERON:0005057!1.25e-27!26;UBERON:0002365!5.57e-23!31;UBERON:0002330!5.57e-23!31;UBERON:0003929!1.80e-22!54;UBERON:0002368!3.25e-20!35;UBERON:0004921!1.58e-17!129;UBERON:0004185!1.58e-17!129;UBERON:0000949!1.90e-15!45;UBERON:0000160!5.27e-15!27;UBERON:0002530!3.81e-14!59;UBERON:0001007!3.84e-14!155;UBERON:0001555!3.84e-14!155;UBERON:0007026!3.84e-14!155;UBERON:0005911!3.86e-14!82;UBERON:0004119!9.58e-13!169;UBERON:0000925!9.58e-13!169;UBERON:0006595!9.58e-13!169;UBERON:0005172!2.08e-12!55;UBERON:0005173!2.08e-12!55;UBERON:0005409!1.63e-11!35;UBERON:0002417!4.62e-11!61;UBERON:0000916!4.62e-11!61;UBERON:0005933!3.01e-10!1;UBERON:0005942!3.01e-10!1;UBERON:0005932!3.01e-10!1;UBERON:0001154!3.61e-10!1;UBERON:0001153!3.61e-10!1;UBERON:0001242!8.56e-10!4;UBERON:0001262!8.56e-10!4;UBERON:0004786!8.56e-10!4;UBERON:0004808!8.56e-10!4;UBERON:0001277!8.56e-10!4;UBERON:0001155!2.01e-09!9;UBERON:0000077!3.48e-08!130;UBERON:0003350!5.22e-08!5;UBERON:0004907!5.81e-08!5;UBERON:0000059!8.41e-08!11;UBERON:0000490!1.32e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.68e-47;19!UBERON:0006925;1.68e-47;19!UBERON:0002423;5.47e-36;25!UBERON:0002365;7.96e-28;31!UBERON:0002330;7.96e-28;31!UBERON:0002108;6.88e-26;4!UBERON:0002368;1.48e-24;33!UBERON:0000949;5.64e-18;43!UBERON:0005172;9.14e-11;52!UBERON:0005173;9.14e-11;52!UBERON:0001007;3.21e-10;81!UBERON:0002417;1.79e-09;58!UBERON:0000916;1.79e-09;58!UBERON:0002530;2.28e-09;57!UBERON:0000160;1.23e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.58e-47,19;UBERON:0006925,1.58e-47,19;UBERON:0008836,1.58e-47,19;UBERON:0008835,5.52e-41,22;UBERON:0003894,5.52e-41,22;UBERON:0009854,3.50e-39,23;UBERON:0007499,5.23e-36,25;UBERON:0009497,5.23e-36,25;UBERON:0000015,5.23e-36,25;UBERON:0002423,5.23e-36,25;UBERON:0006235,5.23e-36,25;UBERON:0004161,5.23e-36,25;UBERON:0009856,1.33e-34,26;UBERON:0002365,6.16e-29,31;UBERON:0002330,6.16e-29,31;UBERON:0002108,7.18e-26,4;UBERON:0002368,1.45e-25,35;UBERON:0000949,9.43e-20,45;UBERON:0003929,2.36e-16,54;UBERON:0005172,2.36e-16,54;UBERON:0005173,2.36e-16,54;UBERON:0002530,6.55e-15,59;UBERON:0002417,1.19e-14,60;UBERON:0000916,1.19e-14,60;UBERON:0004921,2.17e-13,118;UBERON:0001007,1.08e-10,145;UBERON:0001555,1.08e-10,145;UBERON:0007026,1.08e-10,145;UBERON:0005911,1.58e-10,82;UBERON:0001041,7.01e-10,87;UBERON:0004119,1.40e-09,160;UBERON:0000925,1.40e-09,160;UBERON:0006595,1.40e-09,160;UBERON:0005177,2.10e-08,101;UBERON:0011216,9.05e-08,223;UBERON:0000160,1.25e-07,17;UBERON:0009569,1.68e-07,112;UBERON:0003914,3.79e-07,117;UBERON:0005256,8.03e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.3073160180422,13.7595810334868,8.86184860022106,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.884575645033392,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82995549073455,8.15916997973548,6.47074021000175,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.62071615126029,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85544384999395,3.27839340755936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@APOB | |||
}} |
Revision as of 01:59, 21 January 2014
Short description: | p15@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_15_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -117bp_to_X03324_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | Q13789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.62e-43 | 12 |
endodermal cell | 1.08e-08 | 58 |