FFCP PHASE1:Hg19::chr2:21228233..21228242,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=603 | |||
|TSSclassifier=strong | |||
|UniProt=P04114 | |||
|association_with_transcript=66bp_to_X03325_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_56_at_APOB_5end | |||
|id=chr2:21228233..21228242,- | |||
|ontology_enrichment_celltype=CL:0000181!1.42e-35!12;CL:0000417!1.42e-35!12;CL:0000668!1.42e-35!12;CL:0000414!1.42e-35!12;CL:0000412!1.42e-35!12;CL:0000182!1.42e-35!12;CL:0002127!1.09e-12!1;CL:0000914!1.09e-12!1;CL:0000911!1.09e-12!1;CL:0000814!1.09e-12!1;CL:0002042!1.09e-12!1;CL:0002039!1.09e-12!1;CL:0002040!1.09e-12!1;CL:0002041!1.09e-12!1;CL:0000223!5.26e-12!59;CL:0000893!5.60e-07!2;CL:0002489!5.60e-07!2;CL:0000809!5.60e-07!2;CL:0000808!5.60e-07!2;CL:0000894!5.60e-07!2;CL:0000806!5.60e-07!2;CL:0000807!5.60e-07!2;CL:0000805!5.60e-07!2;CL:0002425!5.60e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.30e-66;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.94e-66,12;CL:0000223,8.85e-14,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.33e-49;11!UBERON:0009497;4.79e-42;13!UBERON:0001041;1.99e-18;30!UBERON:0003104;8.63e-18;31!CL:0000223;3.27e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.85e-39!19;UBERON:0006925!2.85e-39!19;UBERON:0008836!2.85e-39!19;UBERON:0005057!7.93e-36!26;UBERON:0008835!8.00e-34!22;UBERON:0003894!8.00e-34!22;UBERON:0009854!2.53e-32!23;UBERON:0007499!1.11e-29!25;UBERON:0009497!1.11e-29!25;UBERON:0000015!1.11e-29!25;UBERON:0002423!1.11e-29!25;UBERON:0006235!1.11e-29!25;UBERON:0004161!1.11e-29!25;UBERON:0009856!1.64e-28!26;UBERON:0002368!2.24e-26!35;UBERON:0003929!6.16e-25!54;UBERON:0002365!8.59e-24!31;UBERON:0002330!8.59e-24!31;UBERON:0000949!2.69e-20!45;UBERON:0002530!9.10e-19!59;UBERON:0004921!2.04e-18!129;UBERON:0004185!2.04e-18!129;UBERON:0005911!5.98e-16!82;UBERON:0001007!4.98e-15!155;UBERON:0001555!4.98e-15!155;UBERON:0007026!4.98e-15!155;UBERON:0004119!1.25e-13!169;UBERON:0000925!1.25e-13!169;UBERON:0006595!1.25e-13!169;UBERON:0005172!4.68e-13!55;UBERON:0005173!4.68e-13!55;UBERON:0002417!1.09e-11!61;UBERON:0000916!1.09e-11!61;UBERON:0000160!2.70e-10!27;UBERON:0000490!7.03e-09!138;UBERON:0001041!9.72e-09!98;UBERON:0005409!5.49e-08!35;UBERON:0000077!8.18e-08!130;UBERON:0002108!1.40e-07!14;UBERON:0002405!3.31e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.10e-73;19!UBERON:0006925;2.10e-73;19!UBERON:0002423;7.87e-56;25!UBERON:0002365;2.56e-43;31!UBERON:0002330;2.56e-43;31!UBERON:0002368;3.25e-38;33!UBERON:0000949;6.66e-28;43!UBERON:0005172;1.31e-16;52!UBERON:0005173;1.31e-16;52!UBERON:0002417;1.53e-14;58!UBERON:0000916;1.53e-14;58!UBERON:0002530;2.06e-14;57!UBERON:0001007;1.01e-11;81!UBERON:0002114;1.30e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.74e-73,19;UBERON:0006925,1.74e-73,19;UBERON:0008836,1.74e-73,19;UBERON:0008835,1.72e-63,22;UBERON:0003894,1.72e-63,22;UBERON:0009854,9.72e-61,23;UBERON:0007499,6.82e-56,25;UBERON:0009497,6.82e-56,25;UBERON:0000015,6.82e-56,25;UBERON:0002423,6.82e-56,25;UBERON:0006235,6.82e-56,25;UBERON:0004161,6.82e-56,25;UBERON:0009856,9.50e-54,26;UBERON:0002365,4.24e-45,31;UBERON:0002330,4.24e-45,31;UBERON:0002368,5.90e-40,35;UBERON:0000949,4.36e-31,45;UBERON:0003929,6.64e-26,54;UBERON:0005172,6.64e-26,54;UBERON:0005173,6.64e-26,54;UBERON:0002530,1.05e-23,59;UBERON:0002417,2.61e-23,60;UBERON:0000916,2.61e-23,60;UBERON:0005911,4.96e-17,82;UBERON:0001041,4.81e-16,87;UBERON:0004921,8.97e-15,118;UBERON:0005177,8.49e-14,101;UBERON:0009569,2.01e-12,112;UBERON:0001007,5.33e-12,145;UBERON:0001555,5.33e-12,145;UBERON:0007026,5.33e-12,145;UBERON:0003914,6.98e-12,117;UBERON:0005256,2.19e-11,122;UBERON:0004119,7.41e-11,160;UBERON:0000925,7.41e-11,160;UBERON:0006595,7.41e-11,160;UBERON:0000490,2.44e-09,148;UBERON:0001048,1.29e-08,160;UBERON:0003104,1.29e-08,160;UBERON:0009142,1.29e-08,160;UBERON:0002114,1.51e-08,2;UBERON:0011216,1.33e-07,223;UBERON:0000025,4.39e-07,192;UBERON:0002100,7.38e-07,199 | |||
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|short_description=p56@APOB | |||
}} |
Revision as of 01:58, 21 January 2014
Short description: | p56@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_56_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 66bp_to_X03325_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.94e-66 | 12 |
endodermal cell | 8.85e-14 | 58 |