FFCP PHASE1:Hg19::chr17:79637356..79637358,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:79637356..79637358,+ | |||
|id=chr17:79637356..79637358,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.68e-14;2!CL:0000242;2.68e-14;2!CL:0002188;8.12e-13;5!CL:1000746;2.69e-09;7!CL:1000612;2.69e-09;7!CL:0000785;5.39e-08;1!CL:0002616;5.39e-08;1!CL:0000819;5.39e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.74e-15,2;CL:0002188,4.93e-13,5;CL:1000746,1.89e-09,7;CL:1000612,1.89e-09,7;CL:0002616,2.52e-08,1;CL:0000819,3.34e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;5.39e-08;1!DOID:8675;5.39e-08;1!DOID:5093;1.39e-07;4!DOID:1612;1.39e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.34e-08,1;DOID:8675,3.34e-08,1;DOID:5093,9.32e-08,4;DOID:1612,9.32e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.69e-09;7!UBERON:0001229;2.69e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,1.89e-09,7;UBERON:0000074,1.89e-09,7;UBERON:0001229,1.89e-09,7;UBERON:0001230,1.89e-09,7;UBERON:0003220,1.89e-09,7;UBERON:0005749,1.89e-09,7;UBERON:0004199,1.89e-09,7;UBERON:0004209,1.89e-09,7;UBERON:0004198,1.89e-09,7;UBERON:0005103,2.53e-08,8;UBERON:0000083,2.53e-08,8;UBERON:0009201,2.53e-08,8;UBERON:0006553,2.53e-08,8;UBERON:0003074,2.53e-08,8;UBERON:0003060,2.53e-08,8;UBERON:0000080,1.91e-07,9;UBERON:0002120,1.91e-07,9;UBERON:0004875,1.91e-07,9;UBERON:0005721,1.91e-07,9;UBERON:0005754,1.91e-07,9;UBERON:0007297,1.91e-07,9 | |||
|phase1_expression=0,0.856402095563933,0,0,0.446961094427288,1.74467704820074,0,0,0,0,1.39560233594486,0,0.527533956456907,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0.547497700291537,0.125542639594803,0.152826811495903,0.164201178899891,0,0,0,0,0.919421224478927,0,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0.581592955118259,0,0.485168122375632,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0.659702600373432,0,0.426224750532694,0,0,0.622822248995575,0,0,0,0,0,0,0.422510572623884,0,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,1.1384259382189,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0.334372990781356,0,0,0,0.111410456885174,0,0.443067789167242,0,0.128091319725675,0.390178042679635,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0,0.0654895377488563,0,0,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0.44905874525234,0.225222960966644,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0.312160076830321,0,1.04614076386261,0.587172493218824,0.161872944368132,0.561803226808994,0.204154171254893,0.491337269247072,0,0,0.989067717114227,0,0,0,0.250237039743928,0,0,0.612975591598039,0.300476117813194,0.226864366320042,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0,0,0,0.731842236777572,0.397589304964456,0.69716365721711,0.10366105501537,0.756962552626885,0,0,0.643240938192885,0,0,0,0.709840800239063,0.674338760312407,0,1.21323370005633,0.435758888184812,0.237270619111097,0.404493924480493,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0.603173834469785,0,0,1.03993478527958,0,0.115930404975077,0,0.433099343283221,0,0.380508304469197,0,1.71697232418975,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0.616964956219941,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.686286847621712,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0.561320188866147,0,0,0,0,0.925258162815933,0.887808626565635,0,1.03850885836724,0.232420756919918,0,1.40354529212299,0,0.114814448164607,0.364182336013434,0,0,0.0770153371044148,0,0,0.211103257785751,2.27466768141793,0.170093705276516,0.863663664408557,1.54227252690289,0,0,0,0,0,0.219259876645935,0.261435451024901,0.512900250232778,0,0.325378394664303,0,1.19040304263846,0.247528499761764,0,0,0,0,0.770243085573222,1.22802939780904,0.137836572484531,0,0.435050081742686,0.255679882248303,0,0.330569830721956,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0.286249773483982,0,0,0.571890581771475,0,0.855877976067841,0,0,0.539617372749944,0.54907405947211,0.117812402345686,0,0,1.68503382495592,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0.349934720244983,0.192444225451024,0,0,0,0.43050537267123,3.36942951335251,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0.427296284509893,0,0,0,0,0,0.318852545457645,0.798317485731266,0,0.211673582723883,0.324621940274555,0,0,0.94007937463814,0,0.169291777801603,0.642352300414798,0.201799707191048,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0.811367035427949,0.66614393599564,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0,0,0.179736702294654,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,1.30213880542617,0,0,0.1137934482855,0,0,0.344743373241465,0,0.520874984799877,0,0.241192877250816,0,0,0,0,0,0.278847488557207,0,0.113942055847001,0,0.448788222048861,0.217294743844016,0,0.0915975934018623,0,2.04386596391473,0,0,0,0.588187602953219,0.167821586975843,0,0,0.421996129056054,0.326465616318295,0,0,0.995261931078505,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,1.45963831372533,0.391329237864179,0.971121518136371,0.394584402849391,0,0,0,0,0.103688191397247,0,0,0.313932918407225,0,0,0.138674673013139,0,0.195984794828755,0.174118413160805,0.34945333648406,0,0.387025325156341,0.511625219603299,0.246346371159628,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0.426905989478705,1.39866726707491,0.144090417154106,0.114536596165916,0.343189995723929,0.14405479798815,0,0,0.135904206073614,0,0.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| |||
|short_description=p@chr17:79637356..79637358,+ | |||
}} |
Revision as of 18:00, 20 January 2014
Short description: | p@chr17:79637356..79637358, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:79637356..79637358, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.74e-15 | 2 |
glomerular endothelial cell | 4.93e-13 | 5 |
glomerular cell | 1.89e-09 | 7 |
kidney corpuscule cell | 1.89e-09 | 7 |
perirenal adipocyte cell | 2.52e-08 | 1 |
B-1 B cell | 3.34e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 1.89e-09 | 7 |
renal glomerulus | 1.89e-09 | 7 |
renal corpuscle | 1.89e-09 | 7 |
glomerular capsule | 1.89e-09 | 7 |
metanephric mesenchyme | 1.89e-09 | 7 |
glomerular tuft | 1.89e-09 | 7 |
S-shaped body | 1.89e-09 | 7 |
renal vesicle | 1.89e-09 | 7 |
comma-shaped body | 1.89e-09 | 7 |
mesonephric epithelium | 2.53e-08 | 8 |
mesonephric tubule | 2.53e-08 | 8 |
nephric duct | 2.53e-08 | 8 |
renal duct | 2.53e-08 | 8 |
mesonephric duct | 2.53e-08 | 8 |
pronephric duct | 2.53e-08 | 8 |
mesonephros | 1.91e-07 | 9 |
pronephros | 1.91e-07 | 9 |
nephrogenic cord | 1.91e-07 | 9 |
pronephric mesoderm | 1.91e-07 | 9 |
rostral part of nephrogenic cord | 1.91e-07 | 9 |
presumptive pronephric mesoderm | 1.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.34e-08 | 1 |
lymphosarcoma | 3.34e-08 | 1 |
thoracic cancer | 9.32e-08 | 4 |
breast cancer | 9.32e-08 | 4 |