FFCP PHASE1:Hg19::chr15:48937884..48937933,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3603 | |||
|TSSclassifier=strong | |||
|UniProt=Q75N89 | |||
|association_with_transcript=0bp_to_ENST00000537463,ENST00000560355,uc001zwx.1_5end | |||
|coexpression_cluster_id=C720 | |||
|description=CAGE_peak_1_at_FBN1_5end | |||
|id=chr15:48937884..48937933,- | |||
|ontology_enrichment_celltype=CL:0000055!2.68e-42!180;CL:0000057!7.18e-26!75;CL:0000680!1.21e-18!57;CL:0000056!1.21e-18!57;CL:0000355!1.21e-18!57;CL:0000187!1.25e-17!54;CL:0000183!1.81e-17!59;CL:0000222!3.70e-16!119;CL:0000393!1.12e-14!60;CL:0000211!1.12e-14!60;CL:0000192!5.00e-14!42;CL:0000514!5.00e-14!42;CL:0000359!6.23e-12!32;CL:0002620!5.00e-11!23;CL:0002334!1.70e-07!12;CL:0002494!3.29e-07!16;CL:0000136!9.11e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.31e-11;32!CL:0002620;3.80e-11;23!CL:0000057;7.99e-11;73!CL:0000192;9.79e-11;43!CL:0000187;2.77e-10;55!CL:0000134;1.85e-09;55!CL:0000723;8.52e-09;61!CL:0000349;9.43e-09;19!CL:0000048;1.38e-08;58!CL:0000393;1.42e-08;61!CL:0000211;1.42e-08;61!CL:0002320;1.82e-08;188!CL:0002334;1.42e-07;12!CL:0002494;2.79e-07;16!CL:0000034;7.75e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.43e-27,76;CL:0000680,2.54e-19,58;CL:0000056,2.54e-19,58;CL:0000355,2.54e-19,58;CL:0000187,2.74e-18,55;CL:0000222,7.08e-17,121;CL:0000393,2.85e-15,61;CL:0000211,2.85e-15,61;CL:0000192,1.25e-14,43;CL:0000514,1.25e-14,43;CL:0000359,4.54e-12,32;CL:0002620,3.75e-11,23;CL:0000349,9.48e-09,19;CL:0002334,1.41e-07,12;CL:0002494,2.77e-07,16;CL:0000136,7.77e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;9.79e-11;43!CL:0000355;1.51e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.22e-22!83;UBERON:0002329!1.22e-22!83;UBERON:0003077!1.22e-22!83;UBERON:0003059!1.22e-22!83;UBERON:0007282!1.22e-22!83;UBERON:0009618!1.22e-22!83;UBERON:0007285!1.22e-22!83;UBERON:0004290!1.29e-20!70;UBERON:0004872!3.26e-19!84;UBERON:0001134!4.21e-19!61;UBERON:0002036!4.21e-19!61;UBERON:0003082!4.21e-19!61;UBERON:0002385!4.46e-19!63;UBERON:0001015!4.46e-19!63;UBERON:0000383!4.46e-19!63;UBERON:0000486!1.97e-17!82;UBERON:0005256!6.92e-17!143;UBERON:0002049!4.10e-16!79;UBERON:0007798!4.10e-16!79;UBERON:0000475!6.19e-16!365;UBERON:0001009!5.84e-13!113;UBERON:0004535!8.99e-13!110;UBERON:0001981!2.17e-12!60;UBERON:0007500!2.17e-12!60;UBERON:0004537!2.17e-12!60;UBERON:0006965!2.17e-12!60;UBERON:0000055!2.95e-12!69;UBERON:0003914!4.61e-12!118;UBERON:0000481!6.42e-12!347;UBERON:0002100!6.87e-12!216;UBERON:0001637!2.02e-11!42;UBERON:0003509!2.02e-11!42;UBERON:0004572!2.02e-11!42;UBERON:0000490!1.05e-10!138;UBERON:0004573!2.24e-10!33;UBERON:0004571!2.24e-10!33;UBERON:0000119!1.02e-09!312;UBERON:0000477!1.60e-09!286;UBERON:0000468!1.76e-09!659;UBERON:0000483!2.73e-09!309;UBERON:0003104!3.17e-09!238;UBERON:0009142!3.17e-09!238;UBERON:0004923!1.10e-08!57;UBERON:0000948!1.27e-08!24;UBERON:0005498!1.27e-08!24;UBERON:0004140!1.27e-08!24;UBERON:0009881!1.27e-08!24;UBERON:0004141!1.27e-08!24;UBERON:0003084!1.27e-08!24;UBERON:0007005!1.27e-08!24;UBERON:0004139!1.27e-08!24;UBERON:0004291!1.27e-08!24;UBERON:0007100!1.56e-08!27;UBERON:0002199!3.58e-08!45;UBERON:0002416!3.58e-08!45;UBERON:0003102!7.57e-08!95;UBERON:0000478!1.78e-07!24;UBERON:0005631!6.84e-07!14;UBERON:0000158!6.84e-07!14;UBERON:0002097!7.29e-07!40;UBERON:0000467!7.39e-07!625;UBERON:0000480!9.18e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.36e-09;33!UBERON:0004571;1.36e-09;33!UBERON:0002385;6.96e-09;31!UBERON:0001015;6.96e-09;31!UBERON:0000383;6.96e-09;31!UBERON:0002384;1.07e-08;198!UBERON:0001637;1.88e-08;42!UBERON:0003509;1.88e-08;42!UBERON:0004572;1.88e-08;42!UBERON:0000948;4.29e-08;22!UBERON:0007100;5.30e-08;25!UBERON:0000478;2.65e-07;24!UBERON:0002049;9.35e-07;75!UBERON:0007798;9.35e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.32e-21,73;UBERON:0002329,2.55e-21,71;UBERON:0003059,2.55e-21,71;UBERON:0007282,2.55e-21,71;UBERON:0004290,2.55e-21,71;UBERON:0009618,2.55e-21,71;UBERON:0003077,4.95e-21,72;UBERON:0007285,4.95e-21,72;UBERON:0007503,6.59e-21,78;UBERON:0001134,8.77e-20,62;UBERON:0002036,8.77e-20,62;UBERON:0003082,8.77e-20,62;UBERON:0002385,9.33e-20,64;UBERON:0001015,9.33e-20,64;UBERON:0000383,9.33e-20,64;UBERON:0004872,7.12e-19,83;UBERON:0000486,6.30e-18,83;UBERON:0003104,3.64e-16,160;UBERON:0009142,3.64e-16,160;UBERON:0002049,9.23e-16,78;UBERON:0007798,9.23e-16,78;UBERON:0005256,2.05e-14,122;UBERON:0001009,1.31e-12,112;UBERON:0004535,2.03e-12,109;UBERON:0007500,5.28e-12,59;UBERON:0001981,5.28e-12,59;UBERON:0004537,5.28e-12,59;UBERON:0006965,5.28e-12,59;UBERON:0000055,6.84e-12,68;UBERON:0000490,8.61e-12,148;UBERON:0001637,1.50e-11,42;UBERON:0003509,1.50e-11,42;UBERON:0004572,1.50e-11,42;UBERON:0003914,1.60e-11,117;UBERON:0004573,1.71e-10,33;UBERON:0004571,1.71e-10,33;UBERON:0004923,2.55e-09,66;UBERON:0000119,3.14e-09,309;UBERON:0002100,3.47e-09,199;UBERON:0000483,8.22e-09,306;UBERON:0000948,1.02e-08,24;UBERON:0005498,1.02e-08,24;UBERON:0004140,1.02e-08,24;UBERON:0009881,1.02e-08,24;UBERON:0004141,1.02e-08,24;UBERON:0003084,1.02e-08,24;UBERON:0007005,1.02e-08,24;UBERON:0004139,1.02e-08,24;UBERON:0004291,1.02e-08,24;UBERON:0007100,1.27e-08,27;UBERON:0002199,2.34e-08,46;UBERON:0002416,2.34e-08,46;UBERON:0003102,1.22e-07,99;UBERON:0000478,2.45e-07,24;UBERON:0002097,4.93e-07,41;UBERON:0005631,5.81e-07,14;UBERON:0000158,5.81e-07,14 | |||
|phase1_expression=452.197486004415,312.158563833053,481.359289987741,359.263141087738,351.758381314275,303.573806386928,182.375912281184,118.131616330817,129.54807158712,8.84642171405432,2.79120467188971,266.06159125455,197.297699714883,109.285689663721,168.018469494053,114.295274896802,126.565850885035,117.579924552367,107.833148532702,30.164659228813,66.5042253456265,51.7200290438845,22.8988789704845,23.9530243877547,47.2040324876459,2.21598876669059,2.29881650459848,2.67616656466509,0,0,6.34746105595912,0,0.90361775633475,0.739508020333575,0.0774672005803016,0,6.16560922603179,14.9578760303607,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23779651843358,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0.382273228125229,7.93027971474155,5.04457706683382,7.11137028892708,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0.25618263945135,0.520237390239513,2.13769275984779,2.21080014228679,3.47763702882063,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,577.822273164089,150.236992573614,140.648818027883,800.22628337943,891.378805110612,461.336162890224,219.498921386103,319.719109788832,173.660459130393,300.886792356699,269.916296434976,30.2561664399716,0.364295288292542,0,0,0.348259474598534,0.26591592103773,0,0,0,19.0811911072037,24.0865686629715,17.0098845787721,50.3124068312369,41.5304441847807,15.9568464325239,17.1375872560185,25.0664256394249,69.3744212239085,25.1040459573503,29.4065401489677,13.6848979029332,23.9180816397206,29.0453833473236,27.5448262279798,41.8815725652334,39.2926402095797,23.9862453429476,10.7321646226118,8.54339093611316,9.52649068438118,1.31780417436063,11.6334079244498,0.872188104285069,1058.55025711103,462.201367575716,870.85518220854,2496.91278361842,390.489888800391,196.237160049807,304.234637829659,386.774715918107,273.865711151794,203.278404153159,169.346531625543,493.576571550121,582.513859649279,89.0421440968427,78.9764994380711,56.4767103329005,85.4846452756302,90.7768674516303,122.537818886676,123.175357477872,188.025991725757,48.7652239727719,161.29154441537,380.160914330257,420.353779773547,114.680331604191,92.7017402942948,133.490538365575,113.232260484128,125.510044314335,238.364848138295,350.622038394078,408.34704410813,117.402309570622,1272.4106859411,766.671025858657,534.280322823255,1151.74962677194,454.255548883039,1302.37292993066,563.189607259391,1214.00815781143,449.964089834415,1172.80731513816,708.323970052493,439.353982433531,1437.43384009977,383.160229559716,250.27143425028,3.28543450377605,6.00041465299836,2.58124135850103,0.975789649036763,1.72288698817931,1.62671520017326,6.73796857599908,3.5324919122588,1.82488679537915,153.32054168322,200.047931777987,95.3130957332116,174.602340940024,147.263414260595,8.04486240270938,10.7894201649985,8.19437501603839,8.60292987312673,8.06153943141903,10.6771778599993,7.01122802432855,9.61485179114196,5.77120735419586,45.0274827321035,78.5353933299297,92.1925785382336,127.897578905421,0,1.96565443335525,17.1329072937607,4.85609409356116,0.491953754172454,118.896492536878,2.63400684980701,1.1240175325762,0.904760751704678,2.03694579348765,29.3227474779292,50.9568044786993,95.2586857366804,57.1536896527129,992.690509763872,36.0916119402685,34.7239134432458,30.8211726620049,0,0,0,0.234004265139238,0,5.62403003920662,47.0349958956807,5.2456785979683,10.3887886335304,5.81267877027924,2.68367875415648,0.492663237895943,0,1.03664057770386,1.15295962733569,1.38866676769018,2.73040945456327,4.96584953225761,5.86087236050235,37.6359381249951,8.02054443085923,0.300343057843917,3.14409075893636,97.3297812117731,147.354503265649,86.9792069836467,269.143712207693,371.962703685958,78.613155987708,192.007320174276,115.448254971616,33.9513734026028,19.858878483259,43.4268151796242,346.864612614666,816.10289450873,142.420578263073,83.7141993634899,324.117457253202,94.2422728790781,59.684996657798,62.7504090192212,60.3836866739625,0,0,0,427.730367052475,191.81943284297,94.1403573268741,418.128413655969,134.586991270501,157.931769577588,0,0,0,0,11.6883527142333,5.20559415430487,3.86644406388848,5.19300422536481,4.46557126157214,0.749007023947182,2.99161459204025,0.414415513436035,218.145472276631,71.5243845115338,70.2576411382315,211.090424453769,263.182758475814,272.667475593673,466.691397330969,383.706277152842,150.08895267695,118.994031986381,369.309432785703,262.172957666302,177.068806285953,67.15979700972,65.5403939478735,0,0.215714200818617,0,116.097859863917,397.780700430088,278.501460156636,859.693554092062,1358.59884951922,596.964020859147,676.31842977159,500.961396836303,505.885581996646,323.55138485008,188.13582643924,267.052834870943,309.290869548005,301.1675689265,180.707138505237,0.483437798366489,18.2460887975989,0.460404944679482,142.255101275948,124.732450084601,118.929844368198,12.1823895485001,33.5786869775248,18.8243944602445,35.0734139167826,81.3803058764072,50.0426889911945,27.044899138966,91.9801802595114,92.5363516141736,35.7649297557886,37.1250432652592,4.332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| |||
|short_description=p1@FBN1 | |||
}} |
Revision as of 23:25, 11 January 2014
Short description: | p1@FBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FBN1_5end |
Coexpression cluster: | C720_Smooth_Fibroblast_Preadipocyte_Sertoli_Ewing_hepatic_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000537463, ENST00000560355, uc001zwx.1_5end |
EntrezGene: | FBN1 |
HGNC: | 3603 |
UniProt: | Q75N89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.43e-27 | 76 |
muscle precursor cell | 2.54e-19 | 58 |
myoblast | 2.54e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.54e-19 | 58 |
muscle cell | 2.74e-18 | 55 |
mesodermal cell | 7.08e-17 | 121 |
electrically responsive cell | 2.85e-15 | 61 |
electrically active cell | 2.85e-15 | 61 |
smooth muscle cell | 1.25e-14 | 43 |
smooth muscle myoblast | 1.25e-14 | 43 |
vascular associated smooth muscle cell | 4.54e-12 | 32 |
skin fibroblast | 3.75e-11 | 23 |
extraembryonic cell | 9.48e-09 | 19 |
preadipocyte | 1.41e-07 | 12 |
cardiocyte | 2.77e-07 | 16 |
fat cell | 7.77e-07 | 15 |