FFCP PHASE1:Hg19::chr14:81221483..81221489,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C406 | |||
|description=CAGE_peak_at_chr14:81221483..81221489,+ | |||
|id=chr14:81221483..81221489,+ | |||
|ontology_enrichment_celltype=CL:0002166!8.92e-29!3;CL:0002621!3.59e-28!3;CL:0002159!1.16e-17!13;CL:0002537!4.76e-17!5;CL:0002541!3.36e-13!3;CL:0000349!3.57e-13!3;CL:0002577!3.57e-13!3;CL:0002077!7.27e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.72e-66;3!CL:0002621;5.61e-30;3!CL:0002159;6.52e-15;14!CL:0002535;2.90e-12;2!CL:0000349;3.73e-11;19!CL:0002541;8.96e-09;3!CL:0002577;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.92e-66,3;CL:0002621,4.84e-30,3;CL:0002159,6.68e-15,14;CL:0002535,2.32e-12,2;CL:0000349,4.07e-11,19;CL:0002541,8.96e-09,3;CL:0002577,1.51e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3151!2.74e-10!1;DOID:3149!2.74e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.39e-31!14;UBERON:0000158!3.39e-31!14;UBERON:0001949!3.59e-28!3;UBERON:0001708!9.42e-22!4;UBERON:0001704!9.42e-22!4;UBERON:0003124!3.78e-21!7;UBERON:0000478!6.24e-18!24;UBERON:0002090!1.05e-14!6;UBERON:0000476!3.36e-13!3;UBERON:0000920!3.36e-13!3;UBERON:0000305!2.41e-12!7;UBERON:0001828!6.07e-11!8;UBERON:0004871!7.19e-11!8;UBERON:0001987!4.15e-10!4;UBERON:0004340!4.15e-10!4;UBERON:0004923!2.94e-09!57;UBERON:0003129!2.98e-08!11;UBERON:0000075!4.73e-07!13;UBERON:0005944!4.73e-07!13;UBERON:0004288!4.73e-07!13;UBERON:0003089!4.73e-07!13;UBERON:0000064!8.59e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;4.01e-50;4!UBERON:0008895;4.01e-50;4!UBERON:0011159;2.72e-40;5!UBERON:0001949;5.61e-30;3!UBERON:0011137;8.93e-19;11!UBERON:0010323;8.93e-19;11!UBERON:0003929;1.80e-13;7!UBERON:0000075;3.89e-13;16!UBERON:0006955;2.90e-12;2!UBERON:0004801;2.90e-12;2!UBERON:0003350;6.51e-12;8!UBERON:0001828;6.51e-12;8!UBERON:0005631;6.93e-10;10!UBERON:0000158;6.93e-10;10!UBERON:0000478;5.81e-09;24!UBERON:0003124;8.96e-09;3!UBERON:0000920;8.96e-09;3!UBERON:0004765;2.49e-08;26!UBERON:0000486;2.96e-08;12!UBERON:0003729;1.09e-07;13!UBERON:0001987;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,4.37e-50,4;UBERON:0008895,4.37e-50,4;UBERON:0011159,2.91e-40,5;UBERON:0010188,1.05e-33,6;UBERON:0002539,1.05e-33,6;UBERON:0008816,1.05e-33,6;UBERON:0001949,4.84e-30,3;UBERON:0010323,9.20e-19,11;UBERON:0011137,6.68e-15,14;UBERON:0005631,7.69e-15,14;UBERON:0000158,7.69e-15,14;UBERON:0003124,1.49e-13,7;UBERON:0000075,3.97e-13,16;UBERON:0006955,2.32e-12,2;UBERON:0004801,2.32e-12,2;UBERON:0003350,6.16e-12,8;UBERON:0001828,6.16e-12,8;UBERON:0008814,9.59e-12,18;UBERON:0000033,5.04e-10,56;UBERON:0000153,4.56e-09,62;UBERON:0007811,4.56e-09,62;UBERON:0000478,6.22e-09,24;UBERON:0000920,8.96e-09,3;UBERON:0004923,1.67e-08,66;UBERON:0003729,1.05e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.63647672354501,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,10.9188383329259,1.27597587518148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14701507651495,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65412492502765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:81221483..81221489,+ | |||
}} |
Revision as of 21:17, 11 January 2014
Short description: | p@chr14:81221483..81221489, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:81221483..81221489, + |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.92e-66 | 3 |
gingival epithelial cell | 4.84e-30 | 3 |
general ecto-epithelial cell | 6.68e-15 | 14 |
epithelial cell of cervix | 2.32e-12 | 2 |
extraembryonic cell | 4.07e-11 | 19 |
chorionic membrane mesenchymal stem cell | 8.96e-09 | 3 |
placental epithelial cell | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 4.37e-50 | 4 |
splanchnocranium | 4.37e-50 | 4 |
primary subdivision of cranial skeletal system | 2.91e-40 | 5 |
protuberance | 1.05e-33 | 6 |
pharyngeal arch | 1.05e-33 | 6 |
embryonic head | 1.05e-33 | 6 |
gingival epithelium | 4.84e-30 | 3 |
cranial skeletal system | 9.20e-19 | 11 |
axial skeletal system | 6.68e-15 | 14 |
extraembryonic membrane | 7.69e-15 | 14 |
membranous layer | 7.69e-15 | 14 |
chorion | 1.49e-13 | 7 |
subdivision of skeletal system | 3.97e-13 | 16 |
uterine epithelium | 2.32e-12 | 2 |
cervix epithelium | 2.32e-12 | 2 |
epithelium of mucosa | 6.16e-12 | 8 |
gingiva | 6.16e-12 | 8 |
pharyngeal arch system | 9.59e-12 | 18 |
head | 5.04e-10 | 56 |
anterior region of body | 4.56e-09 | 62 |
craniocervical region | 4.56e-09 | 62 |
extraembryonic structure | 6.22e-09 | 24 |
egg chorion | 8.96e-09 | 3 |
organ component layer | 1.67e-08 | 66 |
mouth mucosa | 1.05e-07 | 13 |