FFCP PHASE1:Hg19::chr14:23445970..23445991,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84962 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20250 | |||
|TSSclassifier=strong | |||
|UniProt=G3V5F5 | |||
|association_with_transcript=21bp_to_ENST00000553911_5end | |||
|coexpression_cluster_id=C318 | |||
|description=CAGE_peak_6_at_AJUBA_5end | |||
|id=chr14:23445970..23445991,- | |||
|ontology_enrichment_celltype=CL:0000066!7.82e-37!254;CL:0000223!1.97e-18!59;CL:0000181!1.42e-10!12;CL:0000417!1.42e-10!12;CL:0000668!1.42e-10!12;CL:0000414!1.42e-10!12;CL:0000412!1.42e-10!12;CL:0000182!1.42e-10!12;CL:0002076!3.25e-10!43;CL:0000220!5.84e-10!246;CL:0002321!1.03e-09!248;CL:0002251!1.38e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.80e-22;12!CL:0002251;3.32e-12;20!CL:0002076;7.23e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.93e-24,58;CL:0000182,3.18e-22,12;CL:0000066,1.31e-16,253;CL:0002251,2.55e-12,20;CL:0002076,7.00e-10,42 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.15e-25;13!UBERON:0004161;1.18e-18;11!UBERON:0001041;3.69e-15;30!UBERON:0003104;1.99e-14;31!CL:0000223;8.74e-14;58 | |||
|ontology_enrichment_disease=DOID:305!7.84e-25!106;DOID:0050687!1.15e-21!143;DOID:162!1.13e-12!235;DOID:14566!2.07e-12!239;DOID:7!5.78e-08!39;DOID:299!8.76e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;6.42e-12;25!DOID:3119;2.95e-10;14!DOID:7;1.59e-09;39!DOID:4929;4.52e-09;2!DOID:305;6.60e-07;106!DOID:1749;6.62e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.49e-22,106;DOID:0050687,1.07e-14,143;DOID:299,6.38e-12,25;DOID:7,6.37e-11,39;DOID:3119,3.21e-10,14;DOID:4929,5.34e-09,2;DOID:162,7.35e-09,235;DOID:14566,1.54e-08,239;DOID:1749,4.67e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.61e-19!169;UBERON:0000925!5.61e-19!169;UBERON:0006595!5.61e-19!169;UBERON:0005911!3.91e-17!82;UBERON:0001007!2.11e-16!155;UBERON:0001555!2.11e-16!155;UBERON:0007026!2.11e-16!155;UBERON:0007499!9.79e-16!25;UBERON:0003929!4.20e-15!54;UBERON:0004921!6.01e-15!129;UBERON:0004185!6.01e-15!129;UBERON:0009856!7.29e-15!26;UBERON:0008835!9.42e-15!22;UBERON:0003894!9.42e-15!22;UBERON:0009497!6.11e-14!25;UBERON:0000015!6.11e-14!25;UBERON:0002423!6.11e-14!25;UBERON:0006235!6.11e-14!25;UBERON:0004161!6.11e-14!25;UBERON:0009854!7.63e-14!23;UBERON:0005172!2.38e-13!55;UBERON:0005173!2.38e-13!55;UBERON:0005177!2.58e-13!107;UBERON:0000077!2.98e-12!130;UBERON:0001041!1.40e-11!98;UBERON:0002107!1.83e-11!19;UBERON:0006925!1.83e-11!19;UBERON:0008836!1.83e-11!19;UBERON:0002417!4.60e-11!61;UBERON:0000916!4.60e-11!61;UBERON:0000466!2.38e-10!126;UBERON:0000949!3.70e-10!45;UBERON:0003104!5.03e-10!238;UBERON:0009142!5.03e-10!238;UBERON:0000481!1.18e-09!347;UBERON:0005057!5.19e-09!26;UBERON:0002368!1.22e-08!35;UBERON:0001048!1.37e-08!168;UBERON:0002530!1.09e-07!59;UBERON:0006554!1.26e-07!44;UBERON:0009569!1.30e-07!113;UBERON:0000344!1.53e-07!12;UBERON:0001008!2.55e-07!45;UBERON:0002365!4.30e-07!31;UBERON:0002330!4.30e-07!31;UBERON:0000058!4.97e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.12e-26;25!UBERON:0002107;2.86e-21;19!UBERON:0006925;2.86e-21;19!UBERON:0002368;3.55e-12;33!UBERON:0002365;5.45e-12;31!UBERON:0002330;5.45e-12;31!UBERON:0000949;8.89e-11;43!UBERON:0002394;3.09e-10;4!UBERON:0003928;3.09e-10;4!UBERON:0005172;5.50e-10;52!UBERON:0005173;5.50e-10;52!UBERON:0001007;2.82e-09;81!UBERON:0005409;3.92e-08;22!UBERON:0002417;6.28e-08;58!UBERON:0000916;6.28e-08;58!UBERON:0004921;2.42e-07;33!UBERON:0000344;6.54e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,1.06e-30,22;UBERON:0003894,1.06e-30,22;UBERON:0009854,3.12e-29,23;UBERON:0007499,1.19e-26,25;UBERON:0009497,1.19e-26,25;UBERON:0000015,1.19e-26,25;UBERON:0002423,1.19e-26,25;UBERON:0006235,1.19e-26,25;UBERON:0004161,1.19e-26,25;UBERON:0009856,1.65e-25,26;UBERON:0002107,3.12e-21,19;UBERON:0006925,3.12e-21,19;UBERON:0008836,3.12e-21,19;UBERON:0004921,1.44e-19,118;UBERON:0003929,5.41e-17,54;UBERON:0001007,4.35e-16,145;UBERON:0001555,4.35e-16,145;UBERON:0007026,4.35e-16,145;UBERON:0001041,1.01e-14,87;UBERON:0005177,1.70e-14,101;UBERON:0005911,1.78e-14,82;UBERON:0005172,3.78e-14,54;UBERON:0005173,3.78e-14,54;UBERON:0004119,5.71e-14,160;UBERON:0000925,5.71e-14,160;UBERON:0006595,5.71e-14,160;UBERON:0000949,4.17e-13,45;UBERON:0002368,9.60e-13,35;UBERON:0002417,2.16e-12,60;UBERON:0000916,2.16e-12,60;UBERON:0002365,3.21e-12,31;UBERON:0002330,3.21e-12,31;UBERON:0009569,5.65e-09,112;UBERON:0002530,4.71e-08,59;UBERON:0011216,5.02e-08,223;UBERON:0002100,5.45e-08,199;UBERON:0003104,1.45e-07,160;UBERON:0009142,1.45e-07,160;UBERON:0005256,4.23e-07,122;UBERON:0005409,4.60e-07,25;UBERON:0000344,5.53e-07,20;UBERON:0002394,5.73e-07,6;UBERON:0003928,5.73e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,2.09340350391728,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0.66944122552934,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,1.74437620857014,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,1.17160715916898,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0.194874010322397,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0.220587945464788,0.435758888184812,0,0.269662616320329,0.392442930250692,0,0,0,0.4115740113314,0,19.0132552232746,19.6565443335525,7.08947888017685,0,45.3827338224089,0.514703430895577,0,0,0,0.833296006426766,0,0,0,0,0.587043471179108,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.9516572589318,0,0.184161977871793,0,0,0,0.902399225814824,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,1.50506932156456,0.509752546090077,0,0.447749509444357,0,0,0,0,0.976135183992909,4.6368455241475,0.183138929636687,0.41254749960294,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0.178064071293475,0.661139661443912,0.768760269460425,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0.294747123039363,0,0,0,0,0,2.0996083214699,1.15466535270614,0,0,5.08376524194607,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,2.42644548097782,30.6126208695292,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0.762760950878299,0,0,0,0.173624994933292,0,0,0,0,0,0,0.544692317594951,0.41827123283581,0,0.91153644677601,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,2.12202650606892,8.48118428603645,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.782658475728359,0,0,1.20990716048664,0,0,1.35291077473043,0,0,0,0.627865836814451,1.19472429772959,2.56148591426813,0,0.173559738335131,0.783939179315021,0,0,0,0.0967563312890851,0.584714536689484,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0.881747022766871,0,0,3.60226042885265,0,1.02956998717179,0.14405479798815,0.248505071130865,0,0,0,0.407992870545287,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,3.49487848582361,7.01170322534291,4.69770392772649,6.74035438541849,109.943496851974,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.734364233889974,0.422401346077626,0,1.91915197319445,0,0,0,0,0,0,0,0,0,0,19.9311037802192,6.62534444561107,0,0,7.86999454267915,0,0.106787412567695,0,0,0,0,0,1.91502377331055,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429642228169954,0,0,0,0,0,0,0,1.28664954824955,7.56883446699114,0.906823702049089,0,3.67105056759701,0,0.308801447160972,0.657852148736121,0.176689145945881,0,0.506827321959218,0.512483037175893,0.690860683462397,0,0,0,0,0,0.655219697692825,2.94927490504463,4.86017883724842,0,0,0,0,0,0.279759015438889,0,0,0,0.157265941855896,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,1.83428598521679,1.96393632455575,0,0,0.795664888465099,0,0.20170506870352,0.781514011233092,0,0.49131575253029,3.84425824164318,0,0,0,0,0,0,0,0,11.4986184875636,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0.709163045303809,0.333694205676207,0,0,3.92381028639305,0,1.51149313853035,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0.111855431797792,5.88901401691458,0.243835849964539,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0.150962843566674,0.308696632431779,1.09279780251979,0,0,0,0,0,0,0,0,0.0644578879735772,0,5.17806421956407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672791175483681,0,0,0,0,0,0,0,1.38385556638657,0.213454691755431,0,1.16772762738563,0,0,0,0,0,0 | |||
|short_description=p6@AJUBA | |||
}} |
Revision as of 19:12, 11 January 2014
Short description: | p6@AJUBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AJUBA_5end |
Coexpression cluster: | C318_hepatoma_Intestinal_bile_small_colon_Prostate_endometrial |
Association with transcript: | 21bp_to_ENST00000553911_5end |
EntrezGene: | AJUBA |
HGNC: | 20250 |
UniProt: | G3V5F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.93e-24 | 58 |
hepatocyte | 3.18e-22 | 12 |
epithelial cell | 1.31e-16 | 253 |
epithelial cell of alimentary canal | 2.55e-12 | 20 |
endo-epithelial cell | 7.00e-10 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.49e-22 | 106 |
cell type cancer | 1.07e-14 | 143 |
adenocarcinoma | 6.38e-12 | 25 |
disease of anatomical entity | 6.37e-11 | 39 |
gastrointestinal system cancer | 3.21e-10 | 14 |
tubular adenocarcinoma | 5.34e-09 | 2 |
cancer | 7.35e-09 | 235 |
disease of cellular proliferation | 1.54e-08 | 239 |
squamous cell carcinoma | 4.67e-07 | 14 |