FFCP PHASE1:Hg19::chr12:95775013..95775020,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-341bp_to_ENST00000549961_5end | |||
|coexpression_cluster_id=C727 | |||
|description=CAGE_peak_1_at_ENST00000549961_5end | |||
|id=chr12:95775013..95775020,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.49e-23;1!UBERON:0001045;1.49e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!1.59e-19!11;UBERON:0000160!2.08e-18!27;UBERON:0005409!8.91e-18!35;UBERON:0007023!1.12e-15!115;UBERON:0001155!1.36e-15!9;UBERON:0001154!4.46e-10!1;UBERON:0001153!4.46e-10!1;UBERON:0001000!6.31e-10!1;UBERON:0005352!6.31e-10!1;UBERON:0002146!1.15e-09!1;UBERON:0005623!1.15e-09!1;UBERON:0004921!9.83e-09!129;UBERON:0004185!9.83e-09!129;UBERON:0001007!3.91e-08!155;UBERON:0001555!3.91e-08!155;UBERON:0007026!3.91e-08!155;UBERON:0004907!6.97e-08!5;UBERON:0001046!2.08e-07!19;UBERON:0004119!2.92e-07!169;UBERON:0000925!2.92e-07!169;UBERON:0006595!2.92e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000059;1.97e-32;11!UBERON:0000160;1.03e-30;17!UBERON:0005409;4.07e-24;22!UBERON:0001154;1.49e-23;1!UBERON:0001153;1.49e-23;1!UBERON:0009854;1.49e-23;1!UBERON:0004921;1.85e-23;33!UBERON:0001000;3.67e-23;1!UBERON:0005352;3.67e-23;1!UBERON:0001155;8.06e-23;9!UBERON:0004907;1.24e-18;5!UBERON:0001255;2.74e-12;2!UBERON:0001556;2.74e-12;2!UBERON:0001555;4.96e-10;54!UBERON:0001043;9.31e-09;3!UBERON:0006947;1.26e-08;3!UBERON:0004054;1.26e-08;3!UBERON:0001007;8.58e-08;81!UBERON:0009856;7.07e-07;4!UBERON:0001052;8.85e-07;4!UBERON:0005904;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.49e-32,11;UBERON:0000160,9.67e-31,17;UBERON:0001154,1.67e-23,1;UBERON:0001153,1.67e-23,1;UBERON:0001045,1.67e-23,1;UBERON:0001000,4.10e-23,1;UBERON:0005352,4.10e-23,1;UBERON:0001155,7.49e-23,9;UBERON:0005409,2.17e-21,25;UBERON:0004907,1.04e-18,5;UBERON:0001255,3.24e-12,2;UBERON:0001556,3.24e-12,2;UBERON:0001046,4.07e-11,19;UBERON:0004921,5.84e-09,118;UBERON:0001043,8.96e-09,3;UBERON:0009143,8.96e-09,3;UBERON:0006947,1.30e-08,3;UBERON:0004054,1.30e-08,3;UBERON:0001007,2.93e-07,145;UBERON:0001555,2.93e-07,145;UBERON:0007026,2.93e-07,145;UBERON:0001052,7.70e-07,4;UBERON:0005904,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,2.76283915531148,0,0,0,0,0,0,0,1.1837208676432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.23840590304675,3.66618086960175,0,0,0,0,0,0,0,0,0,1.18375320854817,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81268147816416,0,0.451961481561065,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863424021355654,0,0,1.82631744101899,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,1.09279780251979,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000549961 | |||
}} |
Revision as of 15:17, 11 January 2014
Short description: | p1@ENST00000549961 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000549961_5end |
Coexpression cluster: | C727_colon_smooth_rectum_duodenum_bladder_esophagus_prostate |
Association with transcript: | -341bp_to_ENST00000549961_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
large intestine | 1.49e-32 | 11 |
intestine | 9.67e-31 | 17 |
vermiform appendix | 1.67e-23 | 1 |
caecum | 1.67e-23 | 1 |
midgut | 1.67e-23 | 1 |
vas deferens | 4.10e-23 | 1 |
spermatic cord | 4.10e-23 | 1 |
colon | 7.49e-23 | 9 |
gastrointestinal system | 2.17e-21 | 25 |
lower digestive tract | 1.04e-18 | 5 |
urinary bladder | 3.24e-12 | 2 |
lower urinary tract | 3.24e-12 | 2 |
hindgut | 4.07e-11 | 19 |
subdivision of digestive tract | 5.84e-09 | 118 |
esophagus | 8.96e-09 | 3 |
esophageal region | 8.96e-09 | 3 |
male genital duct | 1.30e-08 | 3 |
internal male genitalia | 1.30e-08 | 3 |
digestive system | 2.93e-07 | 145 |
digestive tract | 2.93e-07 | 145 |
primitive gut | 2.93e-07 | 145 |
rectum | 7.70e-07 | 4 |
duct of male reproductive system | 9.11e-07 | 4 |