FFCP PHASE1:Hg19::chr11:40315686..40315714,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57689 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29317 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCJ2 | |||
|association_with_transcript=-22bp_to_ENST00000278198,NM_020929,uc001mxa.1,uc001mxb.1_5end | |||
|coexpression_cluster_id=C32 | |||
|description=CAGE_peak_3_at_LRRC4C_5end | |||
|id=chr11:40315686..40315714,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.15e-13;82!UBERON:0006241;7.27e-08;3!UBERON:0003057;7.27e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.92e-75!57;UBERON:0005068!9.92e-75!57;UBERON:0006241!9.92e-75!57;UBERON:0007135!9.92e-75!57;UBERON:0002346!1.68e-69!90;UBERON:0003075!4.80e-66!86;UBERON:0007284!4.80e-66!86;UBERON:0002616!5.82e-65!59;UBERON:0002780!3.25e-64!41;UBERON:0001890!3.25e-64!41;UBERON:0006240!3.25e-64!41;UBERON:0001017!6.11e-63!82;UBERON:0003080!2.08e-62!42;UBERON:0005743!1.21e-61!86;UBERON:0000955!1.40e-60!69;UBERON:0006238!1.40e-60!69;UBERON:0000073!2.06e-58!94;UBERON:0001016!2.06e-58!94;UBERON:0002020!3.10e-56!34;UBERON:0003528!3.10e-56!34;UBERON:0001893!5.08e-56!34;UBERON:0002791!3.11e-54!33;UBERON:0001869!1.18e-52!32;UBERON:0003056!1.74e-50!61;UBERON:0007023!7.71e-50!115;UBERON:0000956!3.92e-40!25;UBERON:0000203!3.92e-40!25;UBERON:0000924!1.41e-39!173;UBERON:0006601!1.41e-39!173;UBERON:0000153!3.05e-39!129;UBERON:0007811!3.05e-39!129;UBERON:0000033!8.05e-39!123;UBERON:0004121!8.67e-37!169;UBERON:0002619!4.58e-36!22;UBERON:0001950!1.72e-32!20;UBERON:0002420!1.27e-17!9;UBERON:0007245!1.27e-17!9;UBERON:0010009!1.27e-17!9;UBERON:0010011!1.27e-17!9;UBERON:0000454!1.27e-17!9;UBERON:0002308!2.73e-17!9;UBERON:0000125!2.73e-17!9;UBERON:0000025!8.92e-17!194;UBERON:0000477!5.93e-16!286;UBERON:0009663!9.33e-14!7;UBERON:0003076!1.52e-13!15;UBERON:0003057!1.52e-13!15;UBERON:0000483!1.75e-13!309;UBERON:0000119!3.57e-13!312;UBERON:0004111!5.78e-13!241;UBERON:0001871!9.03e-13!7;UBERON:0000200!1.06e-12!6;UBERON:0000475!1.76e-12!365;UBERON:0000064!1.77e-12!219;UBERON:0000481!1.51e-11!347;UBERON:0002298!2.32e-11!8;UBERON:0000349!7.07e-11!5;UBERON:0001872!1.77e-10!5;UBERON:0000922!5.00e-10!612;UBERON:0001894!1.68e-09!7;UBERON:0006222!1.68e-09!7;UBERON:0000062!3.09e-09!511;UBERON:0004733!6.41e-09!12;UBERON:0002028!6.41e-09!12;UBERON:0007277!6.41e-09!12;UBERON:0000369!6.64e-09!4;UBERON:0002435!6.64e-09!4;UBERON:0000204!6.64e-09!4;UBERON:0010082!6.64e-09!4;UBERON:0002050!2.73e-08!605;UBERON:0005423!2.73e-08!605;UBERON:0004732!4.12e-08!13;UBERON:0000468!5.62e-08!659;UBERON:0000923!8.66e-08!604;UBERON:0005291!8.66e-08!604;UBERON:0006598!8.66e-08!604;UBERON:0002532!8.66e-08!604;UBERON:0002771!1.53e-07!3;UBERON:0002021!3.17e-07!5;UBERON:0005383!4.12e-07!3;UBERON:0005382!4.12e-07!3;UBERON:0002240!5.43e-07!3;UBERON:0006331!8.18e-07!3;UBERON:0000988!9.54e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.43e-76;22!UBERON:0001950;5.50e-75;20!UBERON:0001869;1.94e-72;32!UBERON:0003528;4.13e-71;34!UBERON:0002020;4.13e-71;34!UBERON:0002791;1.63e-68;32!UBERON:0000956;4.95e-67;25!UBERON:0000203;4.95e-67;25!UBERON:0001893;2.52e-66;34!UBERON:0002780;1.78e-53;41!UBERON:0001890;1.78e-53;41!UBERON:0000073;5.97e-43;53!UBERON:0002616;5.97e-43;53!UBERON:0000200;3.15e-30;6!UBERON:0001017;1.50e-29;75!UBERON:0000955;4.15e-28;68!UBERON:0001871;3.10e-26;6!UBERON:0001016;6.26e-24;83!UBERON:0002420;3.11e-20;9!UBERON:0007245;3.11e-20;9!UBERON:0010009;3.11e-20;9!UBERON:0010011;3.11e-20;9!UBERON:0000454;3.11e-20;9!UBERON:0000125;1.11e-19;9!UBERON:0002308;1.11e-19;9!UBERON:0000349;4.56e-17;5!UBERON:0002021;9.70e-17;5!UBERON:0001872;1.97e-16;5!UBERON:0001870;4.40e-16;3!UBERON:0000369;3.06e-12;4!UBERON:0002435;3.06e-12;4!UBERON:0000204;3.06e-12;4!UBERON:0009663;7.82e-12;7!UBERON:0001876;8.37e-12;2!UBERON:0002771;8.83e-12;2!UBERON:0002702;2.50e-11;2!UBERON:0002148;5.97e-11;2!UBERON:0006331;5.97e-11;2!UBERON:0009662;5.97e-11;2!UBERON:0011216;1.92e-10;132!UBERON:0007023;1.64e-09;114!UBERON:0005383;4.50e-08;3!UBERON:0005382;4.50e-08;3!UBERON:0002298;5.96e-08;6!UBERON:0002240;7.27e-08;3!UBERON:0005174;7.27e-08;3!UBERON:0001137;7.27e-08;3!UBERON:0000988;1.40e-07;3!UBERON:0010314;1.57e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,8.29e-86,34;UBERON:0002020,8.29e-86,34;UBERON:0001869,5.82e-84,32;UBERON:0001049,3.39e-79,56;UBERON:0005068,3.39e-79,56;UBERON:0006241,3.39e-79,56;UBERON:0007135,3.39e-79,56;UBERON:0001893,7.40e-79,34;UBERON:0002791,4.24e-77,32;UBERON:0002619,2.36e-76,22;UBERON:0002780,3.08e-76,41;UBERON:0001890,3.08e-76,41;UBERON:0003080,3.08e-76,41;UBERON:0006240,3.08e-76,41;UBERON:0001950,5.33e-75,20;UBERON:0000073,7.63e-73,53;UBERON:0002616,7.63e-73,53;UBERON:0000956,4.82e-67,25;UBERON:0000203,4.82e-67,25;UBERON:0001017,4.53e-64,81;UBERON:0000955,2.95e-63,68;UBERON:0006238,2.95e-63,68;UBERON:0001016,3.83e-57,89;UBERON:0003075,2.26e-52,82;UBERON:0007284,2.26e-52,82;UBERON:0003056,8.59e-50,61;UBERON:0002346,1.15e-49,86;UBERON:0010371,4.88e-40,104;UBERON:0010314,1.34e-32,132;UBERON:0007023,2.42e-31,114;UBERON:0000200,3.16e-30,6;UBERON:0004121,5.42e-27,171;UBERON:0000924,5.42e-27,171;UBERON:0006601,5.42e-27,171;UBERON:0001871,4.04e-26,6;UBERON:0011216,4.08e-22,223;UBERON:0002420,2.51e-20,9;UBERON:0007245,2.51e-20,9;UBERON:0010009,2.51e-20,9;UBERON:0010011,2.51e-20,9;UBERON:0000454,2.51e-20,9;UBERON:0000125,9.55e-20,9;UBERON:0002308,9.55e-20,9;UBERON:0000025,8.57e-19,192;UBERON:0000349,3.50e-17,5;UBERON:0002021,8.96e-17,5;UBERON:0001872,2.18e-16,5;UBERON:0001870,2.92e-16,3;UBERON:0004111,9.72e-14,240;UBERON:0000369,2.54e-12,4;UBERON:0002435,2.54e-12,4;UBERON:0000204,2.54e-12,4;UBERON:0010082,2.54e-12,4;UBERON:0009663,6.42e-12,7;UBERON:0002771,8.61e-12,2;UBERON:0001876,8.61e-12,2;UBERON:0002702,1.89e-11,2;UBERON:0002148,6.78e-11,2;UBERON:0006331,6.78e-11,2;UBERON:0009662,6.78e-11,2;UBERON:0000483,3.00e-10,306;UBERON:0000119,4.38e-10,309;UBERON:0003076,3.55e-08,15;UBERON:0003057,3.55e-08,15;UBERON:0005383,4.82e-08,3;UBERON:0005382,4.82e-08,3;UBERON:0002298,5.90e-08,6;UBERON:0002240,8.06e-08,3;UBERON:0005174,8.06e-08,3;UBERON:0001137,8.06e-08,3;UBERON:0000988,1.53e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,8.01815673539923,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,2.69027484669369,1.99613798001194,0,0.437299999980979,0,0,0,0,0,0.291604613383254,0,0.885741385813839,5.42683973814336,0,0.110579259931225,0.591095237907095,2.4132393686937,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.808813595768125,0,0.702793337176017,0,0,0,0,0,1.22429104652196,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,2.65905343014691,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,1.64286454670392,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,6.53776349335563,0,0,0,0,0,2.24773359634691,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,2.24795422962573,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,1.77213635993397,5.73523445039227,8.13741049592249,0.573409195690071,1.66393577305278,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49814649913135,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.637724760305049,0.247871528518004,0.558644917973244,0,0,0,0,0,1.92687675289379,0,6.5449882213432,2.66651273512982,3.27693205088234,1.45230230174858,5.65164759711479,0,0,0,0,0,0,0,0,0,0,0,0,0.49131575253029,0,1.48582686160468,0.781078098613847,7.23403787754144,1.71222687523548,2.18789923607288,0,0,0.351742488719241,0,1.07140367175657,0,0.606965604236632,0.455324382702595,0,0,0,0.679697329768317,1.24968269769413,0,0,0.156986185701028,5.34193005714407,0,0.913158720509496,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,0,0,1.59160620129095,0,0,0,0,0.0771741581079447,0,0,0,0,3.33724394095407,0.891139200981258,2.113278637917,0,0,0.0644578879735772,0,0,0,0,0,0,0.860037498908708,0.788857810965923,1.49581278420012,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.86179392551411,0.213233981900981,0.476128862927481,0,0,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0,2.03448089157869,0,0,0 | |||
|short_description=p3@LRRC4C | |||
}} |
Revision as of 07:23, 11 January 2014
Short description: | p3@LRRC4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC4C_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | -22bp_to_ENST00000278198, NM_020929, uc001mxa.1, uc001mxb.1_5end |
EntrezGene: | LRRC4C |
HGNC: | 29317 |
UniProt: | Q9HCJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data