FFCP PHASE1:Hg19::chr11:15095131..15095148,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=797 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1438 | |||
|TSSclassifier=strong | |||
|UniProt=P10092 | |||
|association_with_transcript=0bp_to_NM_000728,uc001mlx.1,uc009ygr.1_5end | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_1_at_CALCB_5end | |||
|id=chr11:15095131..15095148,+ | |||
|ontology_enrichment_celltype=CL:0002322!5.66e-09!5;CL:0000540!7.54e-07!6;CL:0000031!7.54e-07!6;CL:0000404!7.54e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.58e-16;5!CL:0002321;2.55e-13;15!CL:0000540;7.79e-09;6!CL:0000404;7.79e-09;6!CL:0000333;5.53e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.87e-16,5;CL:0000540,7.47e-09,6;CL:0000031,7.47e-09,6;CL:0000404,7.47e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000031;7.79e-09;6 | |||
|ontology_enrichment_disease=DOID:171!4.70e-14!10;DOID:169!1.05e-07!6;DOID:3095!1.13e-07!22;DOID:2994!1.13e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;4.14e-22;10!DOID:3095;1.60e-11;22!DOID:2994;1.60e-11;22!DOID:169;6.49e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.38e-22,10;DOID:3095,1.74e-11,22;DOID:2994,1.74e-11,22;DOID:169,6.42e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.64e-19!94;UBERON:0001016!1.64e-19!94;UBERON:0005743!3.44e-16!86;UBERON:0001017!3.00e-15!82;UBERON:0001049!1.16e-14!57;UBERON:0005068!1.16e-14!57;UBERON:0006241!1.16e-14!57;UBERON:0007135!1.16e-14!57;UBERON:0002346!1.83e-14!90;UBERON:0000924!2.63e-14!173;UBERON:0006601!2.63e-14!173;UBERON:0003076!9.21e-12!15;UBERON:0003057!9.21e-12!15;UBERON:0004121!1.21e-11!169;UBERON:0003075!3.71e-11!86;UBERON:0007284!3.71e-11!86;UBERON:0002616!2.67e-10!59;UBERON:0000955!2.27e-09!69;UBERON:0006238!2.27e-09!69;UBERON:0004732!2.72e-09!13;UBERON:0000922!3.20e-08!612;UBERON:0004733!6.79e-08!12;UBERON:0002028!6.79e-08!12;UBERON:0007277!6.79e-08!12;UBERON:0002298!9.42e-08!8;UBERON:0003296!1.59e-07!4;UBERON:0010133!1.59e-07!4;UBERON:0002780!5.58e-07!41;UBERON:0001890!5.58e-07!41;UBERON:0006240!5.58e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.09e-19;6!UBERON:0002346;6.98e-15;4!UBERON:0000923;6.98e-15;4!UBERON:0010316;6.98e-15;4!UBERON:0005291;6.98e-15;4!UBERON:0000922;1.13e-13;49!UBERON:0004732;5.82e-12;13!UBERON:0002050;6.55e-12;5!UBERON:0005423;6.55e-12;5!UBERON:0000988;7.07e-11;3!UBERON:0001896;1.53e-10;3!UBERON:0005290;1.53e-10;3!UBERON:0004733;1.61e-09;12!UBERON:0002028;1.61e-09;12!UBERON:0003296;1.00e-08;4!UBERON:0010133;1.00e-08;4!UBERON:0001905;2.04e-08;2!UBERON:0002757;2.04e-08;2!UBERON:0010134;2.04e-08;2!UBERON:0005408;2.04e-08;2!UBERON:0001899;2.04e-08;2!UBERON:0003714;3.37e-08;2!UBERON:0002148;4.23e-08;2!UBERON:0006331;4.23e-08;2!UBERON:0009662;4.23e-08;2!UBERON:0000013;5.53e-07;5!UBERON:0002410;5.53e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,6.36e-20,6;UBERON:0003076,2.25e-13,15;UBERON:0003057,2.25e-13,15;UBERON:0001016,1.87e-12,89;UBERON:0004732,4.41e-12,13;UBERON:0000988,5.57e-11,3;UBERON:0001896,1.14e-10,3;UBERON:0005290,1.14e-10,3;UBERON:0010096,1.14e-10,3;UBERON:0004733,1.25e-09,12;UBERON:0002028,1.25e-09,12;UBERON:0007277,1.25e-09,12;UBERON:0001017,7.53e-09,81;UBERON:0003296,1.05e-08,4;UBERON:0010133,1.05e-08,4;UBERON:0001905,2.05e-08,2;UBERON:0002757,2.05e-08,2;UBERON:0010134,2.05e-08,2;UBERON:0005408,2.05e-08,2;UBERON:0001899,2.05e-08,2;UBERON:0003714,3.14e-08,2;UBERON:0002148,4.31e-08,2;UBERON:0006331,4.31e-08,2;UBERON:0009662,4.31e-08,2;UBERON:0004121,9.99e-08,171;UBERON:0000924,9.99e-08,171;UBERON:0006601,9.99e-08,171;UBERON:0002346,1.65e-07,86;UBERON:0000013,5.48e-07,5;UBERON:0002410,5.48e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,2.43947412259191,1.45782745153634,2.09149097165133,4.04278114559945,2.01856680700503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,1.54657762555539,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,1.66215201785745,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0.222617410045812,0,0.844501632511974,0,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4449915564171,3.2076507472158,0,0,0,0,0,0,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,3.05515072466813,0,0,0,0,0,0.468528891450678,0,0.19566461893209,0,0,2.41981432097328,0,0,36.0776206594782,1.03688191397247,0,0,0,1.19472429772959,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0.225980740780532,0,0,0,1.36885967914362,0,0,0,0,0.114536596165916,14.585574818267,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.224809265081,0,0,0,1.44677833618517,2.61324929534744,2.07720169014593,0,0,0.0607495566580247,0,0,1.73100140845494,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,8.53267511986234,5.55376927319298,5.8169524880672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86704597845036,1.55300672151593,3.35320575883471,12.4513771442608,0,0,0,0,5.62001886968258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,5.06776613564405,28.1506035922055,0.54604819096007,23.5928216636095,90.1317661231135,336.981343020227,3.91051442581271,0,0,195.339262581655,0.352675943690684,0,0.0642292250964595,0,0,0.41023272848151,0,0.207471757392654,0,25.6984956466478,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,1.40696995487696,0,39.6419358549932,10.0885116665647,3.03482802118316,0.227662191351298,0,0,0,1.76721305739762,0.131545547125698,0,0,0,0.628462359664008,0,6.39211104356647,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,11.9135571642906,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,6.31636551347685,0,0,0.5647304101948,2.6385724018903,11.7751017982005,0,1.31135736302374,15.5204707799303,0,46.6639563261219,2.55201007249429,0.594092800654172,18.1741962860862,0,0.187967835959707,0,0,0,1.41157948686277,0,0,0,0,1.41994405973866,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0.407955318967927,1.3360870263278,0,0,0,0,0,0,0,0.952257725854961,0,0.186224142887574,0.112131862580613,0.572824424503484,15.1587891718664,0,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@CALCB | |||
}} |
Revision as of 06:44, 11 January 2014
Short description: | p1@CALCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CALCB_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 0bp_to_NM_000728, uc001mlx.1, uc009ygr.1_5end |
EntrezGene: | CALCB |
HGNC: | 1438 |
UniProt: | P10092 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.87e-16 | 5 |
neuron | 7.47e-09 | 6 |
neuroblast | 7.47e-09 | 6 |
electrically signaling cell | 7.47e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
brainstem | 6.36e-20 | 6 |
posterior neural tube | 2.25e-13 | 15 |
chordal neural plate | 2.25e-13 | 15 |
nervous system | 1.87e-12 | 89 |
segmental subdivision of nervous system | 4.41e-12 | 13 |
pons | 5.57e-11 | 3 |
medulla oblongata | 1.14e-10 | 3 |
myelencephalon | 1.14e-10 | 3 |
future myelencephalon | 1.14e-10 | 3 |
segmental subdivision of hindbrain | 1.25e-09 | 12 |
hindbrain | 1.25e-09 | 12 |
presumptive hindbrain | 1.25e-09 | 12 |
central nervous system | 7.53e-09 | 81 |
gland of diencephalon | 1.05e-08 | 4 |
neuroendocrine gland | 1.05e-08 | 4 |
pineal body | 2.05e-08 | 2 |
regional part of epithalamus | 2.05e-08 | 2 |
secretory circumventricular organ | 2.05e-08 | 2 |
circumventricular organ | 2.05e-08 | 2 |
epithalamus | 2.05e-08 | 2 |
neural tissue | 3.14e-08 | 2 |
locus ceruleus | 4.31e-08 | 2 |
brainstem nucleus | 4.31e-08 | 2 |
hindbrain nucleus | 4.31e-08 | 2 |
ectoderm-derived structure | 9.99e-08 | 171 |
ectoderm | 9.99e-08 | 171 |
presumptive ectoderm | 9.99e-08 | 171 |
neurectoderm | 1.65e-07 | 86 |
sympathetic nervous system | 5.48e-07 | 5 |
autonomic nervous system | 5.48e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.38e-22 | 10 |
germ cell and embryonal cancer | 1.74e-11 | 22 |
germ cell cancer | 1.74e-11 | 22 |
neuroendocrine tumor | 6.42e-10 | 6 |