FFCP PHASE1:Hg19::chr10:102505946..102505949,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5076 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8616 | |||
|TSSclassifier=strong | |||
|UniProt=G3V5M8 | |||
|association_with_transcript=10bp_to_ENST00000554363_5end | |||
|coexpression_cluster_id=C1556 | |||
|description=CAGE_peak_14_at_PAX2_5end | |||
|id=chr10:102505946..102505949,+ | |||
|ontology_enrichment_celltype=CL:1000497!2.00e-18!18;CL:0002518!2.00e-18!18;CL:1000449!2.26e-15!16;CL:1000507!1.72e-14!12;CL:1000494!1.72e-14!12;CL:0002681!1.41e-13!13;CL:0002584!1.41e-13!13;CL:0002322!7.50e-13!5;CL:0000650!1.41e-10!3;CL:1000618!1.41e-10!3;CL:1001318!1.41e-10!3;CL:0002173!1.41e-10!3;CL:1000500!1.41e-10!3;CL:0000239!2.25e-10!3;CL:1000615!2.25e-10!3;CL:0002306!2.25e-10!3;CL:1000612!8.01e-10!7;CL:1000746!8.01e-10!7;CL:0000167!2.69e-08!1;CL:0000164!2.69e-08!1;CL:0000502!2.69e-08!1;CL:0000172!2.69e-08!1;CL:0000173!2.69e-08!1;CL:0002351!2.69e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000650;6.30e-26;2!CL:1000500;6.30e-26;2!CL:1000618;6.30e-26;2!CL:1001318;6.30e-26;2!CL:0002173;6.30e-26;2!CL:0000669;1.06e-13;4!CL:1000746;2.11e-08;7!CL:1000612;2.11e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,9.18e-26,2;CL:1000500,9.18e-26,2;CL:1000618,9.18e-26,2;CL:1001318,9.18e-26,2;CL:0002173,9.18e-26,2;CL:0000669,1.29e-13,4;CL:1000746,2.35e-08,7;CL:1000612,2.35e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.30e-26;2 | |||
|ontology_enrichment_disease=DOID:4430!2.69e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!8.77e-30!27;UBERON:0003918!8.77e-30!27;UBERON:0005095!8.77e-30!27;UBERON:0007687!8.77e-30!27;UBERON:0000489!7.97e-25!32;UBERON:0000080!4.82e-24!18;UBERON:0002120!4.82e-24!18;UBERON:0004875!4.82e-24!18;UBERON:0005721!4.82e-24!18;UBERON:0005754!4.82e-24!18;UBERON:0007297!4.82e-24!18;UBERON:0004876!1.57e-21!20;UBERON:0003887!1.88e-20!21;UBERON:0006555!1.29e-19!17;UBERON:0005103!1.29e-19!17;UBERON:0000083!1.29e-19!17;UBERON:0009201!1.29e-19!17;UBERON:0004819!1.29e-19!17;UBERON:0006553!1.29e-19!17;UBERON:0003074!1.29e-19!17;UBERON:0003060!1.29e-19!17;UBERON:0006554!1.62e-17!44;UBERON:0001008!4.38e-17!45;UBERON:0000058!2.64e-16!26;UBERON:0005172!3.16e-16!55;UBERON:0005173!3.16e-16!55;UBERON:0001851!2.15e-15!16;UBERON:0004211!2.26e-15!16;UBERON:0001285!2.26e-15!16;UBERON:0007684!2.26e-15!16;UBERON:0003220!2.26e-15!16;UBERON:0004208!2.26e-15!16;UBERON:0009773!1.72e-14!12;UBERON:0001231!1.72e-14!12;UBERON:0004810!1.72e-14!12;UBERON:0002417!2.07e-14!61;UBERON:0000916!2.07e-14!61;UBERON:0003064!5.67e-14!37;UBERON:0001225!1.41e-13!13;UBERON:0008987!1.41e-13!13;UBERON:0006947!1.34e-10!3;UBERON:0004054!1.34e-10!3;UBERON:0003567!1.41e-10!3;UBERON:0003838!1.41e-10!3;UBERON:0005169!1.41e-10!3;UBERON:0002321!1.41e-10!3;UBERON:0005215!1.41e-10!3;UBERON:0002303!1.41e-10!3;UBERON:0002319!1.41e-10!3;UBERON:0003103!1.86e-10!69;UBERON:0006853!2.25e-10!3;UBERON:0007685!2.25e-10!3;UBERON:0004134!2.25e-10!3;UBERON:0000353!2.47e-10!17;UBERON:0001896!5.42e-10!3;UBERON:0005290!5.42e-10!3;UBERON:0010096!5.42e-10!3;UBERON:0000074!8.01e-10!7;UBERON:0001229!8.01e-10!7;UBERON:0001230!8.01e-10!7;UBERON:0005749!8.01e-10!7;UBERON:0004199!8.01e-10!7;UBERON:0004209!8.01e-10!7;UBERON:0004198!8.01e-10!7;UBERON:0001301!9.79e-09!1;UBERON:0000998!2.02e-08!1;UBERON:0006868!2.02e-08!1;UBERON:0005904!3.70e-08!4;UBERON:0006834!4.41e-08!1;UBERON:0002363!7.16e-08!1;UBERON:0007647!7.16e-08!1;UBERON:0010115!7.16e-08!1;UBERON:0003886!1.31e-07!63;UBERON:0005177!2.85e-07!107;UBERON:0009569!9.01e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.10e-50;1!UBERON:0003567;6.30e-26;2!UBERON:0003838;6.30e-26;2!UBERON:0003586;6.30e-26;2!UBERON:0005169;6.30e-26;2!UBERON:0002321;6.30e-26;2!UBERON:0005215;6.30e-26;2!UBERON:0002303;6.30e-26;2!UBERON:0002319;6.30e-26;2!UBERON:0006947;8.69e-18;3!UBERON:0004054;8.69e-18;3!UBERON:0005904;1.06e-13;4!UBERON:0003891;1.06e-13;4!UBERON:0002113;2.56e-09;24!UBERON:0011143;2.56e-09;24!UBERON:0000074;2.11e-08;7!UBERON:0001229;2.11e-08;7!UBERON:0000489;6.90e-08;29!UBERON:0006554;1.17e-07;30!UBERON:0001008;1.17e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.46e-50,1;UBERON:0003567,9.18e-26,2;UBERON:0003838,9.18e-26,2;UBERON:0003586,9.18e-26,2;UBERON:0005169,9.18e-26,2;UBERON:0002321,9.18e-26,2;UBERON:0005215,9.18e-26,2;UBERON:0002303,9.18e-26,2;UBERON:0002319,9.18e-26,2;UBERON:0005103,1.11e-25,8;UBERON:0000083,1.11e-25,8;UBERON:0009201,1.11e-25,8;UBERON:0006553,1.11e-25,8;UBERON:0003074,1.11e-25,8;UBERON:0003060,1.11e-25,8;UBERON:0000080,5.74e-23,9;UBERON:0002120,5.74e-23,9;UBERON:0004875,5.74e-23,9;UBERON:0005721,5.74e-23,9;UBERON:0005754,5.74e-23,9;UBERON:0007297,5.74e-23,9;UBERON:0004876,5.14e-19,11;UBERON:0002113,5.50e-18,26;UBERON:0003918,5.50e-18,26;UBERON:0011143,5.50e-18,26;UBERON:0005095,5.50e-18,26;UBERON:0007687,5.50e-18,26;UBERON:0006947,6.76e-18,3;UBERON:0004054,6.76e-18,3;UBERON:0003887,1.57e-17,12;UBERON:0000489,3.01e-15,31;UBERON:0005904,8.82e-14,4;UBERON:0003891,1.29e-13,4;UBERON:0006555,1.95e-13,16;UBERON:0004819,1.95e-13,16;UBERON:0000058,1.72e-11,19;UBERON:0006554,2.24e-10,47;UBERON:0001008,3.53e-10,48;UBERON:0005172,3.82e-09,54;UBERON:0005173,3.82e-09,54;UBERON:0010532,2.35e-08,7;UBERON:0000074,2.35e-08,7;UBERON:0001229,2.35e-08,7;UBERON:0001230,2.35e-08,7;UBERON:0003220,2.35e-08,7;UBERON:0005749,2.35e-08,7;UBERON:0004199,2.35e-08,7;UBERON:0004209,2.35e-08,7;UBERON:0004198,2.35e-08,7;UBERON:0002417,2.58e-08,60;UBERON:0000916,2.58e-08,60;UBERON:0003064,3.92e-08,28;UBERON:0003103,1.96e-07,68 | |||
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|short_description=p14@PAX2 | |||
}} |
Revision as of 04:35, 11 January 2014
Short description: | p14@PAX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PAX2_5end |
Coexpression cluster: | C1556_epididymis_seminal_Renal_ductus_kidney_rhabdomyosarcoma_renal |
Association with transcript: | 10bp_to_ENST00000554363_5end |
EntrezGene: | PAX2 |
HGNC: | 8616 |
UniProt: | G3V5M8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 9.18e-26 | 2 |
kidney interstitial cell | 9.18e-26 | 2 |
juxtaglomerular complex cell | 9.18e-26 | 2 |
renal interstitial pericyte | 9.18e-26 | 2 |
extraglomerular mesangial cell | 9.18e-26 | 2 |
pericyte cell | 1.29e-13 | 4 |
glomerular cell | 2.35e-08 | 7 |
kidney corpuscule cell | 2.35e-08 | 7 |