FFCP PHASE1:Hg19::chr1:86934584..86934598,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1179 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2015 | |||
|TSSclassifier=strong | |||
|UniProt=F5H5S5 | |||
|association_with_transcript=-12bp_to_ENST00000495894,ENST00000539889_5end | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_2_at_CLCA1_5end | |||
|id=chr1:86934584..86934598,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;6.40e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001155!1.23e-27!9;UBERON:0000160!1.44e-26!27;UBERON:0000059!1.08e-22!11;UBERON:0005409!1.36e-20!35;UBERON:0001154!1.65e-16!1;UBERON:0001153!1.65e-16!1;UBERON:0002108!5.84e-10!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.49e-59;17!UBERON:0005409;1.18e-46;22!UBERON:0002108;1.95e-40;4!UBERON:0001155;2.67e-39;9!UBERON:0000059;2.84e-32;11!UBERON:0004921;1.78e-28;33!UBERON:0001154;6.40e-23;1!UBERON:0001153;6.40e-23;1!UBERON:0009854;6.40e-23;1!UBERON:0001555;8.59e-12;54!UBERON:0002114;1.04e-08;2!UBERON:0001007;7.76e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.49e-59,17;UBERON:0005409,2.73e-41,25;UBERON:0002108,1.95e-40,4;UBERON:0001155,2.67e-39,9;UBERON:0000059,2.84e-32,11;UBERON:0001154,6.40e-23,1;UBERON:0001153,6.40e-23,1;UBERON:0001045,6.40e-23,1;UBERON:0004921,5.69e-09,118;UBERON:0002114,1.04e-08,2;UBERON:0001007,2.87e-07,145;UBERON:0001555,2.87e-07,145;UBERON:0007026,2.87e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9384051040206,7.96118080530053,21.3860550726769,0,0,0,0,0,0,0,0,0,0,6.04953580243319,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3211240976991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6728822067193,20.326039126868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8127515344312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CLCA1 | |||
}} |
Revision as of 19:23, 10 January 2014
Short description: | p2@CLCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLCA1_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | -12bp_to_ENST00000495894, ENST00000539889_5end |
EntrezGene: | CLCA1 |
HGNC: | 2015 |
UniProt: | F5H5S5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.49e-59 | 17 |
gastrointestinal system | 2.73e-41 | 25 |
small intestine | 1.95e-40 | 4 |
colon | 2.67e-39 | 9 |
large intestine | 2.84e-32 | 11 |
vermiform appendix | 6.40e-23 | 1 |
caecum | 6.40e-23 | 1 |
midgut | 6.40e-23 | 1 |
subdivision of digestive tract | 5.69e-09 | 118 |
duodenum | 1.04e-08 | 2 |
digestive system | 2.87e-07 | 145 |
digestive tract | 2.87e-07 | 145 |
primitive gut | 2.87e-07 | 145 |