Coexpression cluster:C3809: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Coexpression_clusters
|full_id=C3809_granulocyte_Astrocyte_Trabecular_acute_Meningeal_Renal_Myoblast
|id=C3809
}}") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=-0.159426209280061,-0.231925498757082,-0.0831827421014,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.0831827421014,-0.0831827421014,-0.231925498757082,0.415484380253248,0.537792052067227,0.376405722875302,0.32889777369421,-0.0325067174948093,-0.0288338787875295,-0.172046217044244,-0.190516183118063,-0.0831827421014,-0.222783620150557,0.7728668204019,0.743670458056504,0.350262051583732,0.394466859212949,0.669152357101288,0.594996735730458,0.32414239495496,0.327648262465529,0.394121341805716,-0.231925498757082,-0.231925498757082,-0.231925498757082,0.199987550712457,0.296216396266148,-0.0831827421014,0.279496438782805,0.0680575912186634,0.459886183114379,-0.0831827421014,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.0831827421014,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.115954425322148,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.152938404880486,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.185095983987422,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.189783813172722,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.206118511455446,-0.231925498757082,-0.127383615118653,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.0831827421014,-0.202100781152509,0.343217783263374,-0.231925498757082,-0.231925498757082,-0.150721719464765,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.0702404724811673,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.0831827421014,-0.0831827421014,-0.0831827421014,0.0303000916835462,-0.123662548305451,-0.231925498757082,-0.231925498757082,-0.231925498757082,0.097084378694884,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.181283550529209,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.128998022470815,-0.231925498757082,-0.0831827421014,-0.025891004322914,0.015711841303987,0.216347200788071,-0.0831827421014,-0.0334371938827975,-0.0831827421014,-0.0597211834191653,0.500700896145097,0.389946959674161,0.513901123526162,-0.055633552453101,0.467673617850451,0.241828491570174,-0.231925498757082,-0.231925498757082,-0.231925498757082,0.134179706601209,-0.0831827421014,-0.0701854348164778,0.119928295132773,0.158601458104974,-0.00294005732854563,-0.0668617768808955,-0.0831827421014,0.0279949927781301,0.031462971562862,-0.146107348055403,-0.0831827421014,-0.106535131208513,0.0638220913311075,0.0136543081921862,-0.222727782766771,0.0527963813293441,-0.0831827421014,0.084379720031229,0.144940396564394,0.28847141170368,0.171738215795955,0.0579455330861036,0.15999958003845,-0.231925498757082,-0.231925498757082,0.212373057433727,-0.0567118355804075,0.152728785403424,-0.110515814585448,0.19216064354458,0.231528033768044,0.110130455041576,0.100867825442442,0.0662002772816806,0.0544485743668542,0.156022397892715,0.296870456446843,0.217751740446292,0.396013723991777,0.465605856287649,0.203830325534923,0.247422493237109,0.205494225988783,0.456661412445929,0.523516018655146,0.48520589511019,-0.00992526229787882,0.377760447621303,-0.0404789757386217,0.256865142699398,0.0667240700226682,0.339839692879118,0.154972136173798,0.539899640137056,0.508773971204379,0.108304107437124,0.421272910223758,0.213680573804484,-0.0275471238105083,0.222359857221942,0.390053942759305,-0.0831827421014,0.154026623486184,0.390073139974378,0.224425661364923,0.0973104585322735,0.031965243798821,0.318043182398951,0.311551667660996,0.317286626011862,-0.0409500114158771,0.0223472567511848,0.149818240751179,0.261017923938396,0.347473659882632,0.0422802192158465,0.176046194900599,0.113714141345542,0.125444048790305,0.301504099922195,0.256474739705948,0.307303183120474,0.284498010588714,0.0519427056783196,-0.231925498757082,0.132518503899734,0.315938044801467,-0.0831827421014,-0.159364186359956,0.151832723317199,0.152256458565823,0.111493957082215,0.11310177567003,0.170362733213717,0.263508302601633,0.0858559680819088,0.0649825051332415,0.0705711860076504,0.00816311689210883,0.497153140193049,0.407438394439645,0.442243496382208,-0.231925498757082,-0.231925498757082,-0.0831827421014,0.685136078683046,-0.0955330538528995,0.259432302798618,0.0029992658306162,-0.0831827421014,0.274801007001317,0.250511541498591,0.284035478085827,0.531693850340203,0.506390103420802,0.372406101736876,0.148402075380291,-0.0246176260735875,0.082057283381951,0.0138379532557818,-0.231925498757082,-0.231925498757082,0.00828692047816007,-0.231925498757082,0.0254042521685952,-0.0831827421014,0.0328712323690482,0.0997090614564912,0.0362560283772204,0.12643405229693,0.334356250514631,-0.231925498757082,-0.0640146329349823,-0.0831827421014,-0.231925498757082,-0.231925498757082,0.146876886503058,-0.0831827421014,0.128944647480946,-0.0831827421014,0.173320497663143,0.0470632829198495,-0.0831827421014,0.664801619597658,0.524456734718938,0.334030172030694,-0.0895938754808099,-0.0831827421014,0.409668671647537,0.0188756301822498,-0.0831827421014,0.528167538043435,0.500807092237113,0.511280965869218,-0.0641778190253389,-0.0831827421014,0.400831479448253,0.325086912088648,-0.0112703050682632,0.329093589428505,-0.117501555909747,-0.0831827421014,-0.073209088585912,-0.0831827421014,-0.0831827421014,-0.231925498757082,0.103855875541012,-0.231925498757082,0.645416651438672,0.0272596915891422,0.177343054788084,0.30286791186881,0.11695089039547,-0.231925498757082,-0.231925498757082,-0.231925498757082,0.0726465586204786,0.295200847478564,0.216691280241428,0.189842901829296,0.0690952244537646,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.0831827421014,-0.219226310112171,0.105050890437065,-0.149869040323796,0.0493475128514811,-0.231925498757082,-0.0358054759334481,-0.0831827421014,-0.231925498757082,-0.0868599967405597,0.404924212878484,0.310384275005672,0.335499911105591,0.317741584789505,0.368361060126956,-0.231925498757082,-0.231925498757082,-0.231925498757082,0.176126224039008,0.0302250541045211,0.392846345426271,-0.220372754208716,-0.111891157323918,0.0333594784065828,-0.179562828164005,-0.0892820797971283,-0.0831827421014,-0.231925498757082,0.198843781145874,0.102270214844559,0.196347029941218,0.0927630595534363,0.382570462642835,-0.0606561580081959,-0.0831827421014,-0.0831827421014,0.292987718196063,0.245630245330739,0.0151560505674689,0.585671714565123,0.159590292737117,0.629895449131209,0.603484052656238,0.162127219259675,0.512315472557001,0.274744313566853,0.348646758341091,-0.0831827421014,0.54534485908147,0.468217096299053,0.495037667834884,0.438260251817665,0.64895185537159,0.444740203352885,0.384783684853107,0.497211103578141,0.240551255907337,-0.0142424066167376,-0.231925498757082,0.297094762659572,0.197305595954566,-0.0348475102765846,0.134317059108603,-0.231925498757082,0.115481026821535,0.41044696667667,0.36098037425918,0.45852855530147,0.103519726390764,0.307813309086855,0.511711591792548,0.317103854630147,-0.0831827421014,-0.0831827421014,0.0877642037166336,-0.116823344951689,0.126323832857007,0.128904854793738,0.146508638252426,0.125276663077438,0.0829129612287533,0.0423623833041639,-0.0399235377762646,-0.122600187468354,0.278720755019081,0.33937785789219,0.0142087461782111,0.377751439463966,-0.0831827421014,0.0181031977426842,-0.0831827421014,0.23176370530803,0.238653401894124,0.277777116230199,0.064297243814463,-0.0831827421014,0.152106331746214,0.458365398917867,-0.0831827421014,-0.0831827421014,0.235670543321757,0.124606845914828,-0.231925498757082,0.107531343269758,-0.0831827421014,-0.0740304609126761,0.0418009954496188,-0.0314186496329775,-0.0114847024876003,0.268964463396851,0.149817187175291,0.401387502148356,0.104523350686805,0.0492017043847514,0.14662736475243,-0.148742756655682,-0.231925498757082,0.742379524565677,0.453751934669957,-0.0248335715363041,0.246771817593813,-0.0831827421014,-0.192851094694116,0.128197417565066,-0.0831827421014,0.168183074593683,0.0511253958041235,-0.217124709930244,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.0831827421014,-0.231925498757082,-0.141756328976811,0.306768056141422,-0.231925498757082,0.305944218231442,0.372884307167825,0.602224365001917,0.498373578866876,0.330831213931041,0.369448914231462,0.320288327961353,0.230340261257009,0.32231065612463,0.31550145998943,0.656578579538363,0.590273728861994,0.647026593399414,0.410126845308839,0.520664839272161,0.503640952039626,0.368058351096731,0.253942380698032,0.438959185361048,0.426927901096556,0.291285960246417,0.266284266258039,0.461586501788916,0.528148764011009,0.378194175606519,0.518621777674672,0.350108315407854,0.0334584293571142,-0.231925498757082,0.334524750465507,0.115575707475129,0.513300536512401,-0.0831827421014,0.0447416947903706,-0.115596515809559,-0.0956096267017785,-0.0831827421014,-0.231925498757082,0.666128999888015,0.230491768383305,-0.231925498757082,0.0720913084600757,0.00458292969027058,-0.0829914723122092,-0.058057945439448,-0.0831827421014,0.202948056318998,0.0497305711440937,0.40058842872631,-0.231925498757082,-0.231925498757082,0.404974401163065,-0.101047834847933,-0.0948651126055894,-0.231925498757082,-0.131407538757378,0.0470995513996844,-0.231925498757082,0.14912971321033,0.309474673817031,0.0571170600527562,0.0454566706987326,0.25255960423592,0.188223184392513,-0.0831827421014,-0.129564790347049,-0.0831827421014,-0.145153454932621,-0.231925498757082,-0.0831827421014,-0.231925498757082,-0.0699764996633617,-0.231925498757082,0.00597463771123594,-0.0831827421014,-0.0831827421014,-0.0751978546470454,-0.231925498757082,0.145354730037576,-0.231925498757082,0.400242782339498,0.462332699418094,0.165302576157027,0.398311618191878,0.384760079780214,0.38528497746374,0.393984822950497,0.272603247970867,0.201666751499012,0.325789168218044,-0.0831827421014,0.0740865461106028,-0.095367020823997,-0.161180353104004,-0.231925498757082,-0.193139641128089,0.0127282453112932,0.0683978593205715,-0.028262547782018,-0.0831827421014,-0.108224361243721,0.399942839786866,-0.0313502531393766,-0.0502085647354074,-0.231925498757082,-0.231925498757082,-0.115958126493082,-0.0315004491363452,0.0472714314229424,0.225783109875353,-0.0106015532872205,0.137444073332503,0.221563028188677,0.134762114499039,-0.123154353792172,0.0310113583471489,-0.0831827421014,0.160751402859627,0.375215456795073,-0.231925498757082,0.158490672347786,0.317326717236282,0.401376004767507,0.268624059328001,-0.0800518464129376,-0.195194377918851,-0.231925498757082,0.143471188358979,0.389191950546643,-0.205265275399871,0.15390221505056,0.0937656437300169,-0.0831827421014,-0.0831827421014,0.129200281496113,0.204292546582304,-0.0831827421014,0.104433098055066,0.0544111167903587,-0.0126001304630059,0.313878454639848,0.326191351459734,0.115205107492331,0.161002549359018,-0.0831827421014,0.0486419147034539,0.854575564351715,0.0720820535088239,0.221425179725925,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.0946856022998964,-0.231925498757082,-0.231925498757082,-0.2036864080686,-0.098290837878845,-0.0831827421014,0.129075584852679,0.117592500196431,0.138785703299656,0.0656763214990251,0.229697073391272,-0.0831827421014,0.00226678012140724,0.0468438046740652,0.128141567489928,0.280316384516176,-0.143798666281794,-0.231925498757082,-0.15921666464923,0.0424399106387326,-0.198982263384468,-0.0797482791384327,-0.0395845798819688,-0.160305862718304,0.100814072073211,-0.231925498757082,-0.174711885857475,0.402097185923828,-0.0831827421014,-0.231925498757082,-0.0831827421014,0.576887448965659,0.0774217536354738,0.175900197273198,0.18814947983828,-0.231925498757082,-0.0831827421014,-0.030379968476013,-0.011513247214075,-0.163336398889071,0.148494521493819,-0.147858940057334,-0.183494585078333,-0.231925498757082,-0.231925498757082,-0.00486673662632496,0.224415660033034,-0.0831827421014,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.231925498757082,-0.10704513165254,-0.119809549156563,-0.0964497488119689,-0.0319565191059218,-0.0831827421014,-0.0277969751510568,-0.0751720225142466,0.129927587804637,0.312093921648757,-0.0811743661152016,-0.122865129682624,0.00857768238163115,0.083642381023181,0.489222686358053,0.251317123917377,0.0833736509810583,-0.203690768045062,-0.0287906428943063,-0.0549272792822428,-0.231925498757082,-0.142430134936851,0.112436784012477,0.20296444736773,0.131706194425824,0.154708257117199,-0.231925498757082,0.146737050321528,-0.0443211273818828,0.019196661216781,-0.0495835976511715,-0.0703260861181214,-0.231925498757082,0.309530278450764,0.048935775568092,0.0389734090910821,-0.0831827421014,-0.0831827421014,0.579598680756808,-0.0831827421014,0.0847114617614274,0.271280862754572,0.215497262925304,0.201929543063799,0.0992286528071249,0.311368213515045,-0.0831827421014,0.375097281700283,0.313040454326896,0.117392014732443,0.0779092497415423,0.308860314023791,0.234814687528458,0.0948807441766755,0.0965077705439545,0.381797227214877,0.0320482054865761,0.0228438173442859,-0.231925498757082,-0.231925498757082,-0.231925498757082,0.131769082366507,0.0904538565185944,0.0341293606596787,-0.00400605766994233,0.604907641695927,-0.231925498757082,0.348590651718797,0.56983796947239,-0.175066552594483,-0.0831827421014,0.139926303396001,0.196950849380919,0.205423176541256,0.299886935676719,0.170781605596961,0.000525839302012263,0.0672517838170753,0.344292777921861,-0.0181398895687857,0.300544932410262,0.183238478778479,0.148631264089254,-0.0480404530378645,-0.179439925759022,-0.0831827421014,0.0867565299930922,-0.231925498757082,-0.13429630056801,-0.150048517306178,-0.110381644233085,-0.0831827421014,0.0606408027072503,0.26270975745298,0.107229025743356,0.101573497334701,0.0142687208448226,0.479220049506951,0.226085579503479,-0.211678009889545,0.440288571768239,-0.231925498757082,0.0178445022124874,-0.0173148688947649,-0.0301395013465595,-0.151799693477139,-0.144683973976471,-0.00158818136817303,-0.0358205616189896,-0.0744007092405398,-0.231925498757082,-0.231925498757082,0.0453394965709295,0.0577296422232087,-0.231925498757082,-0.106026820623498,-0.231925498757082,-0.231925498757082,-0.231925498757082,0.0517989382781711,-0.052862130029321,-0.0629014855875367,-0.142690260125526,0.239052645965558,0.212072808021651,-0.231925498757082,-0.113253732243817,-0.0831827421014,-0.231925498757082,0.00172497126417639,-0.0831827421014,-0.231925498757082,0.387196251614821,0.274388331909683,0.146097912785255,0.172502475870619,-0.00610990004157264,-0.169315360177235,-0.167156646618655,-0.231925498757082,0.263615510547695,0.186219068588106,-0.231925498757082,-0.0638314667608623,-0.185741279836154,0.0593409693524235,-0.185877176667607,0.0197618340731072,0.0637171068760503,-0.178560273504038,-0.189482772817487,-0.0609504985717438,-0.0831827421014,0.157706686317648,-0.0286607436660621,0.00948183412616163,0.179903753986958,0.191174124618219,-0.11529484194235,-0.0902027573495634,0.040899296234638,-0.0831827421014,-0.231925498757082,-0.0831827421014,-0.00533956554856367,0,-0.0831827421014,0.17503983637395,-0.192914561022873,-0.0332351560793251,0.0307016316075772,-0.0993111274308282,0,-0.0383307898394214,-0.231925498757082,-0.231925498757082,0.140783899602889,0.423160160062305,-0.127450009496821,-0.231925498757082,-0.231925498757082,0.093587097133952,-0.230367396405128,0.160423683897486,0.129226515507455,0.307307060062927,0.197261154407558,0.124164238485775,0.0196683872315159,-0.0450019047846527,-0.0831827421014,-0.116942823861551,-0.0261843676164116,0.0292434057307418,0.119914101726148,-0.0776634762166764,-0.0628012266254344,0.425440872894185,0.518482232327273,0.219837566209001,-0.231925498757082,-0.231925498757082,-0.013613173291663,-0.168904532596335,-0.00325798409102154,-0.142770128417965,-0.231925498757082,0.410482296576819,0.156260682671009,0.545293522874665,-0.0986099235672036,-0.231925498757082,-0.181839195673219,-0.0836634488335025,-0.231925498757082,-0.0850078933565361,-0.0831827421014|full_id=C3809_granulocyte_Astrocyte_Trabecular_acute_Meningeal_Renal_Myoblast|id=C3809|ontology_enrichment_celltype=CL:0000548!5.15e-19!679;CL:0000255!5.15e-19!679;CL:0000003!3.21e-13!722;CL:0002321!6.72e-11!250;CL:0002371!1.41e-09!588;CL:0000057!3.08e-09!76;CL:0000066!1.09e-08!253;CL:0000055!5.74e-08!106;CL:0000133!1.50e-07!59;CL:1000449!1.88e-07!15;CL:0000221!1.89e-07!72;CL:0000333!2.08e-07!41;CL:0002319!5.94e-07!25|ontology_enrichment_disease=DOID:162!6.71e-19!235;DOID:14566!1.60e-18!239;DOID:2531!2.27e-17!51;DOID:0060083!2.27e-17!51;DOID:1240!1.28e-16!39;DOID:8692!3.71e-14!31;DOID:0050686!1.04e-10!137|ontology_enrichment_uberon=UBERON:0001801!1.17e-07!14;UBERON:0004211!1.88e-07!15;UBERON:0009773!1.88e-07!15;UBERON:0001231!1.88e-07!15;UBERON:0001285!1.88e-07!15;UBERON:0007684!1.88e-07!15;UBERON:0004208!1.88e-07!15;UBERON:0001851!8.42e-07!15;UBERON:0000019!8.61e-07!20;UBERON:0000047!8.61e-07!20;UBERON:0010312!8.61e-07!20;UBERON:0004088!8.61e-07!20;UBERON:0010230!8.61e-07!20;UBERON:0003072!8.61e-07!20;UBERON:0004128!8.61e-07!20;UBERON:0003071!8.61e-07!20|tf_chipseq_enrich=CCNT2#905;3:6.33620157696263:0.00393075003576489:0.0190030830433389!CHD2#1106;3:10.3440228341169:0.000903370110274688:0.00660416288303081!E2F1#1869;3:4.90738921487932:0.00846098534723939:0.0325376260652601!E2F4#1874;3:12.6680603152844:0.000491798700629898:0.00437206030771927!EGR1#1958;3:4.98817909481014:0.00805648813738344:0.032061102140687!ETS1#2113;3:9.72876092220234:0.00108584009258484:0.00762277700003144!FOS#2353;3:8.9979553088944:0.00137249927241713:0.00897460878487181!GABPB1#2553;3:7.06768383618217:0.00283221282541742:0.0154099231713347!IRF1#3659;3:7.6371637535639:0.00224469274729724:0.0128070727033585!MXI1#4601;3:9.9615716287593:0.00101147054125902:0.00720284821072896!NFYA#4800;3:18.4255806998305:0.000159813550781416:0.0019965032811077!NFYB#4801;3:16.7597932535365:0.000212364992329618:0.00245834487185912!NRF1#4899;3:12.2102794477109:0.000549217240102001:0.00471165593387653!SIN3A#25942;3:5.40888472681514:0.00631896197799152:0.0276741757881267!SP1#6667;3:5.6983813781409:0.00540396270171217:0.0246499152954279!SP2#6668;3:26.1535304938446:5.58768218891694e-05:0.000940183567147246!ZBTB7A#51341;3:7.3519093078759:0.00251625586028227:0.014018737106157|tfbs_overrepresentation=0.147255,0.0586687,0.716932,0.0477154,0.199763,0.0050633,0.0430074,0.414564,0.03272,0.0257057,0.139423,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.0226057,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.324808,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.184019,0.120917,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.198787,0.0384161,0.107455,0.212709,0.00315066,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.352278,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,8.86152e-06,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.291327,0.251834,0.064341,0.209032,0.0693924,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.21992,0.153631,0.0927458,0.27413,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.0409286,0.0669887,0.338096,0.144217,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.00163609,0.139021,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.000455452,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,0.00243119,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.00384591,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.187297,0.122935,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.15185,0.206299,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.169057,0.164202,0.100942,0.062995,0.10299,0.14193,0.37245,0.15606,0.161026,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.569726,0.384785,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,0.348993,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.582402,0.0619218,0.1751,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.278352,0.063292,0.254773,0.446759,0.0865903,0.0380459,0.130174,0.584917,0.713218,0.782949,0.635872,0.563047,0.823736,0.0263372,0.0638737,0.629514,0.261553,0.446302,0.373681,0.309233,0.49143,0.330703,0.395854,0.329568,0.178727,0.615744,0.271958,0.292154,0.405773,0.39729,0.581713,0.230901,0.187251,0.362792,0.181715,0.423979,0.109988,0.330894,0.218329,0.427027,0.376924,0.463191,0.0217334,0.528324,0.520763,0.370782,0.415647,0.484505,0.253571,0.276829,0.301787,0.481778,0.316882,0.223503,0.503224,0.603208,0.283727,0.314747,0.0567394,0.291709,0.448095,0.576651,0.416816,0.292835,0.476744,0.439556,0.373868,0.57762,0.608919,0.18237,0.706298,0.00847576,0.400457,0.275351,0.236471,0.185661,0.346319,0.535598,0.270984,0.625945,0.503058,0.513852,0.522083,0.248634,0.281576,0.472384,0.163244,0.0670502,0.0730934,0.184794,0.596648,0.762864,0.581837,0.412837,0.671377,0.546839,0.551561,0.448039,0.218623,0.312808,0.695172,0.0451077,0.0747529,0.229003,0.650179,0.589326,0.154921,0.294698,0.34331,0.477304,0.289204,0.327108,0.683186,0.278044,0.229008,0.428671,0.228096,0.336314,0.19763,0.15631,0.567452,0.421464,0.48267,0.420626,0.516462,0.00404127,0.335105,0.144809,0.145539,0.385517,0.376191,0.447325,0.459928,0.252232,0.152681,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.546222,0.293698,0.284593,0.343734,0.306556,0.305777,0.601433,0.503082,0.522888,0.284629,0.262537,0.359455,0.226257,0.405955,0.41707,0.363685,0.464871,0.0538047,0.206222,0.525396,0.651524,0.113671,0.269226,0.339277,0.192529,0.281425,0.141758,0.455379,0.520495,0.159617,0.238587,0.372281,0.232251,0.189515,0.0891382,0.0595618,0.524997,0.625309,0.347298,0.539392,0.34988,0.475069,0.404569,0.6408,0.630264,0.316179,0.0697683,0.0556835,0.192544,0.0779981,3.32302e-05,0.144322,0.223391,0.203656,0.442884,0.441735,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.000335843,0.0627924,0.00151445,0.0179103,0.00605613,0.279795,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.219383,0.332809,0.19559,0.132201,6.7436e-05,0.0481795,0.199971,0.00202975,0.127758,0.175785,0.184486,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,0.28262,0.0377931,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.0757897,0.161801,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,8.47333e-05,0.219556,0.0394698,0.0596469,0.419264,0.122476,0.108872,0.11002,0.26144,0.0286025,0.000180779,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.394069,0.237101,1.5582e-06,0.0761239,0.172491,0.0818785,0.182701,0.335058,0.147698,0.141463,0.167267,0.140622,0.0889592,0.00643528,0.28711,0.0473033,0.094881,0.00315933,0.132886,0.0774373,0.109194,0.128564,0.131452,0.112518,0.0226843,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.144075,0.0340203,0.0741807,0.00447267,8.15339e-05,0.655293,0.21727,0.289306,0.119215,0.192475,0.177967,0.547859,0.057571,0.047591,0.0899568,0.0608699,0.175319,0.300597,0.0713214,0.223874,0.291114,0.0355833,0.125606,0.175094,9.26534e-06,0.000581378,0.206454,0.218192,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.226171,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.286863,0.0122477,0.194941,0.000125914,0.101607,0.327067,0.172982,0.340936,0.151597,0.0626744,0.191335,0.148574,7.88813e-07,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.170295,0.193653,0.137219,0.228144,0.251466,0.288096,0.11903,0.0838874,0.331451,0.113145,0.112651,0.186638,0.174776,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.184948,0.156261,0.311847,1.03689e-05,0.0590944,0.247324,0.178389,0.218229,0.231073,0.000211542,0.00318326,0.0360851,0.0168763,0.131093,0.0434602,0.133616,0.418146,0.36927,0.449036,0.407369,0.231447,0.544776,0.43956,0.37006,0.42622,0.448797,0.197484,0.396996,0.36145,0.406019,0.381071,0.580441,0.643768,0.432035,0.722159,0.390366,0.48809,0.50058,0.443185,0.522904,6.58045e-05,0.336835,0.227104,0.518585,0.617852,0.38649,0.284625,0.0344717,0.55194,0.144318,0.00513616,0.164197,0.462688,0.287881,0.0556235,0.478174,0.336276,0.468444,0.258219,0.446557,0.243383,0.000171205,0.390974,0.73485,0.319063,0.161598,0.405056,0.644754,0.496032,0.0239796,0.37357,0.000199981,0.0282154,0.069689,0.160298,0.0629574,0.0222555,0.200493,0.20558,0.300504,0.25656,0.425963,0.349197,0.383291,0.156104,0.141318,0.0997241,0.0961477,0.314438,0.354789,0.163828,0.230581,0.120226,0.28424,0.562405,0.00677385,0.181415,0.282286,0.446891,0.0165273,0.408413,0.516511,0.322213,0.656109,0.33942,0.61031,0.387276,0.522605,7.95705e-06,0.537348,0.222037,0.416621,0.416292,0.462712,0.734551,0.579431,0.204817,0.452428,0.138871,0.103502,0.166905,0.19783,0.0833851,0.316453,0.48065,0.175199,0.332919,0.373557,0.523625,0.408861,0.0111982,0.534741,0.39088,0.0758087,0.236011,0.203486,0.273398,0.375787,0.4466,0.351067,0.275347,0.0830022,0.305885,0.0317395,0.0795725,0.30666,0.303709,0.495883,0.386538,0.508064,0.250964,0.383276,0.457886,0.504711,0.220231,0.509064,0.196976,0.191517,0.463751,0.601877,0.307334,0.459728,0.283463,0.00164832,0.472935,0.399569,0.273281,0.368095,0.275089,0.384593,0.47795,0.359231,0.339729,0.197805,0.0690807,0.387069,0.332774,0.00734059,0.299887,0.634365,0.205413,0.17639,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.258854,0.188263,0.0719199,0.264884,0.162568,0.19104,0.163057,0.219428,0.208013,0.0900729,0.0953646,0.166124,0.252184,0.378361,0.255516,0.20753,0.447185,0.179412,0.193601,0.220904,0.222977,0.341681,0.310674,0.21801,0.198614,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.179889,0.226869,0.27872,0.0855609,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.162145,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.350452,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.124213,0.259632,0.30793,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.261744,0.203781,0.21382,0.207559,0.141867,0.193031,0.249101,0.115972,0.224568,0.246105,0.173026,0.0215816,0.139785,0.197112,0.240478,0.156465,0.13108,0.256963,0.222798,0.172134,0.176789,0.0969345,4.0561e-06,0.310405,0.280943,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.295769,0.286691,0.347036,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.253509,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.236464,0.325148,0.115817,0.218052,0.223831,0.11528,0.194982,0.190993,0.281727,0.283218,0.249955,0.164638,0.224257,0.0935776,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.316866,0.171683,0.158847,0.271275,0.071111,0.270604,0.101021,0.222548,0.175934,0.157274,0.215705,0.252796,0.205954,0.361435|tfbs_overrepresentation_for_novel_motifs=0.699513,0.869629,0.690871,0.855819,0.641468,0.853988,0.937929,0.494933,0.491742,1.18351,0.820209,0.985163,0.436625,0.925331,0.639839,0.667627,1.17594,0.575162,0.452865,0.305559,0.69094,0.680949,0.845342,0.635379,0.743951,1.00973,0.409304,0.842925,0.645155,0.388328,0.795576,1.21459,0.534793,1.11965,0.599922,0.137917,2.47502,0.855276,0.567465,0.469078,0.598234,0.777097,0.259059,0.63803,0.901413,0.726632,0.939121,0.808003,0.69206,0.645308,1.02504,0.951993,0.336258,1.29475,1.45259,0.928548,0.650353,0.892517,0.388177,0.891404,1.25741,0.941709,0.492369,1.14672,0.961293,1.11026,1.54311,1.91674,1.2037,1.75271,1.7986,0.502203,7.6454,1.45054,0.430728,0.414196,0.396746,1.12884,1.20029,0.73687,0.459024,9.66237,0.960908,0.498519,1.39759,2.22068,0.303648,1.76229,1.053,2.0169,1.63834,1.36973,1.23218,0.543775,3.81931,0.560075,0.450952,1.27663,1.05794,0.360456,0.569121,1.22626,1.27082,1.1798,1.09802,0.815119,1.16312,0.921547,0.743661,2.55998,0.703975,1.26794,0.684398,0.830777,1.58942,0.594137,1.05469,0.794219,1.10778,0.547323,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,1.37952,1.37044,0.798812,1.50051,0.969553,1.65144,0.372828,0.788803,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,1.33389,0.318511,4.59952,1.37083,0.481626,0.941179,1.78371,1.03563,0.624795,0.744018,0.710709,1.56892,1.35169,1.19946,0.714443,1.11698,0.960047,0.524529,0.936473,0.56135|tfbs_overrepresentation_jaspar=MA0003.1;1.54338,MA0004.1;0.826076,MA0006.1;0.639288,MA0007.1;0.804807,MA0009.1;1.3275,MA0014.1;5.56064,MA0017.1;0.686276,MA0019.1;0.990656,MA0024.1;4.40988,MA0025.1;1.46617,MA0027.1;2.95767,MA0028.1;0.658629,MA0029.1;1.23771,MA0030.1;1.22561,MA0031.1;1.15713,MA0038.1;0.94098,MA0040.1;1.24388,MA0041.1;0.847069,MA0042.1;0.810843,MA0043.1;1.32783,MA0046.1;1.31611,MA0048.1;1.62115,MA0050.1;0.81185,MA0051.1;0.936307,MA0052.1;1.24796,MA0055.1;0.190716,MA0056.1;0,MA0057.1;0.333427,MA0058.1;0.716037,MA0059.1;0.714521,MA0060.1;5.46492,MA0061.1;1.15625,MA0063.1;0,MA0066.1;0.941452,MA0067.1;1.65513,MA0068.1;0.405474,MA0069.1;1.31207,MA0070.1;1.30033,MA0071.1;0.897953,MA0072.1;1.29561,MA0073.1;2.26659,MA0074.1;0.935474,MA0076.1;0.734647,MA0077.1;1.28751,MA0078.1;1.04495,MA0081.1;0.714712,MA0083.1;1.33535,MA0084.1;1.84562,MA0087.1;1.29304,MA0088.1;0.257905,MA0089.1;0,MA0090.1;0.751469,MA0091.1;0.829044,MA0092.1;0.785956,MA0093.1;0.642957,MA0095.1;0,MA0098.1;0,MA0100.1;0.956299,MA0101.1;0.646932,MA0103.1;0.628063,MA0105.1;5.21188,MA0106.1;0.986396,MA0107.1;0.556367,MA0108.2;1.15387,MA0109.1;0,MA0111.1;0.767139,MA0113.1;1.00436,MA0114.1;0.549955,MA0115.1;1.57693,MA0116.1;0.560723,MA0117.1;1.36676,MA0119.1;0.695578,MA0122.1;1.39371,MA0124.1;1.53432,MA0125.1;1.44766,MA0130.1;0,MA0131.1;1.06461,MA0132.1;0,MA0133.1;0,MA0135.1;1.35921,MA0136.1;0.948776,MA0139.1;0.440097,MA0140.1;0.894983,MA0141.1;0.712476,MA0142.1;1.12317,MA0143.1;1.00455,MA0144.1;0.531867,MA0145.1;0.752137,MA0146.1;0.107247,MA0147.1;0.565108,MA0148.1;0.854239,MA0149.1;0.884158,MA0062.2;0.449458,MA0035.2;0.894194,MA0039.2;2.15877,MA0138.2;1.04628,MA0002.2;0.476938,MA0137.2;0.666381,MA0104.2;0.491226,MA0047.2;0.973066,MA0112.2;0.731309,MA0065.2;0.760954,MA0150.1;0.744617,MA0151.1;0,MA0152.1;0.902317,MA0153.1;1.43021,MA0154.1;2.30945,MA0155.1;0.256269,MA0156.1;0.669101,MA0157.1;1.09377,MA0158.1;0,MA0159.1;0.565904,MA0160.1;0.871361,MA0161.1;0,MA0162.1;1.43223,MA0163.1;1.84145,MA0164.1;1.01792,MA0080.2;0.643061,MA0018.2;0.987913,MA0099.2;0.902716,MA0079.2;2.70224,MA0102.2;1.88331,MA0258.1;0.519674,MA0259.1;0.575594,MA0442.1;0}} | ||
|full_id=C3809_granulocyte_Astrocyte_Trabecular_acute_Meningeal_Renal_Myoblast | |||
|id=C3809 | |||
}} |
Latest revision as of 12:33, 17 September 2013
Full id: C3809_granulocyte_Astrocyte_Trabecular_acute_Meningeal_Renal_Myoblast
Phase1 CAGE Peaks
Hg19::chr19:4910094..4910138,+ | p3@UHRF1 |
Hg19::chr19:4910143..4910175,+ | p2@UHRF1 |
Hg19::chr19:4910177..4910205,+ | p4@UHRF1 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>
Ontology term | p-value | n |
---|---|---|
animal cell | 5.15e-19 | 679 |
eukaryotic cell | 5.15e-19 | 679 |
native cell | 3.21e-13 | 722 |
embryonic cell | 6.72e-11 | 250 |
somatic cell | 1.41e-09 | 588 |
fibroblast | 3.08e-09 | 76 |
epithelial cell | 1.09e-08 | 253 |
non-terminally differentiated cell | 5.74e-08 | 106 |
neurectodermal cell | 1.50e-07 | 59 |
epithelial cell of nephron | 1.88e-07 | 15 |
ectodermal cell | 1.89e-07 | 72 |
migratory neural crest cell | 2.08e-07 | 41 |
neural cell | 5.94e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
anterior segment of eyeball | 1.17e-07 | 14 |
nephron epithelium | 1.88e-07 | 15 |
renal tubule | 1.88e-07 | 15 |
nephron tubule | 1.88e-07 | 15 |
nephron | 1.88e-07 | 15 |
uriniferous tubule | 1.88e-07 | 15 |
nephrogenic mesenchyme | 1.88e-07 | 15 |
cortex | 8.42e-07 | 15 |
camera-type eye | 8.61e-07 | 20 |
simple eye | 8.61e-07 | 20 |
immature eye | 8.61e-07 | 20 |
ocular region | 8.61e-07 | 20 |
eyeball of camera-type eye | 8.61e-07 | 20 |
optic cup | 8.61e-07 | 20 |
optic vesicle | 8.61e-07 | 20 |
eye primordium | 8.61e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.71e-19 | 235 |
disease of cellular proliferation | 1.60e-18 | 239 |
hematologic cancer | 2.27e-17 | 51 |
immune system cancer | 2.27e-17 | 51 |
leukemia | 1.28e-16 | 39 |
myeloid leukemia | 3.71e-14 | 31 |
organ system cancer | 1.04e-10 | 137 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 1.54338 |
MA0004.1 | 0.826076 |
MA0006.1 | 0.639288 |
MA0007.1 | 0.804807 |
MA0009.1 | 1.3275 |
MA0014.1 | 5.56064 |
MA0017.1 | 0.686276 |
MA0019.1 | 0.990656 |
MA0024.1 | 4.40988 |
MA0025.1 | 1.46617 |
MA0027.1 | 2.95767 |
MA0028.1 | 0.658629 |
MA0029.1 | 1.23771 |
MA0030.1 | 1.22561 |
MA0031.1 | 1.15713 |
MA0038.1 | 0.94098 |
MA0040.1 | 1.24388 |
MA0041.1 | 0.847069 |
MA0042.1 | 0.810843 |
MA0043.1 | 1.32783 |
MA0046.1 | 1.31611 |
MA0048.1 | 1.62115 |
MA0050.1 | 0.81185 |
MA0051.1 | 0.936307 |
MA0052.1 | 1.24796 |
MA0055.1 | 0.190716 |
MA0056.1 | 0 |
MA0057.1 | 0.333427 |
MA0058.1 | 0.716037 |
MA0059.1 | 0.714521 |
MA0060.1 | 5.46492 |
MA0061.1 | 1.15625 |
MA0063.1 | 0 |
MA0066.1 | 0.941452 |
MA0067.1 | 1.65513 |
MA0068.1 | 0.405474 |
MA0069.1 | 1.31207 |
MA0070.1 | 1.30033 |
MA0071.1 | 0.897953 |
MA0072.1 | 1.29561 |
MA0073.1 | 2.26659 |
MA0074.1 | 0.935474 |
MA0076.1 | 0.734647 |
MA0077.1 | 1.28751 |
MA0078.1 | 1.04495 |
MA0081.1 | 0.714712 |
MA0083.1 | 1.33535 |
MA0084.1 | 1.84562 |
MA0087.1 | 1.29304 |
MA0088.1 | 0.257905 |
MA0089.1 | 0 |
MA0090.1 | 0.751469 |
MA0091.1 | 0.829044 |
MA0092.1 | 0.785956 |
MA0093.1 | 0.642957 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.956299 |
MA0101.1 | 0.646932 |
MA0103.1 | 0.628063 |
MA0105.1 | 5.21188 |
MA0106.1 | 0.986396 |
MA0107.1 | 0.556367 |
MA0108.2 | 1.15387 |
MA0109.1 | 0 |
MA0111.1 | 0.767139 |
MA0113.1 | 1.00436 |
MA0114.1 | 0.549955 |
MA0115.1 | 1.57693 |
MA0116.1 | 0.560723 |
MA0117.1 | 1.36676 |
MA0119.1 | 0.695578 |
MA0122.1 | 1.39371 |
MA0124.1 | 1.53432 |
MA0125.1 | 1.44766 |
MA0130.1 | 0 |
MA0131.1 | 1.06461 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.35921 |
MA0136.1 | 0.948776 |
MA0139.1 | 0.440097 |
MA0140.1 | 0.894983 |
MA0141.1 | 0.712476 |
MA0142.1 | 1.12317 |
MA0143.1 | 1.00455 |
MA0144.1 | 0.531867 |
MA0145.1 | 0.752137 |
MA0146.1 | 0.107247 |
MA0147.1 | 0.565108 |
MA0148.1 | 0.854239 |
MA0149.1 | 0.884158 |
MA0062.2 | 0.449458 |
MA0035.2 | 0.894194 |
MA0039.2 | 2.15877 |
MA0138.2 | 1.04628 |
MA0002.2 | 0.476938 |
MA0137.2 | 0.666381 |
MA0104.2 | 0.491226 |
MA0047.2 | 0.973066 |
MA0112.2 | 0.731309 |
MA0065.2 | 0.760954 |
MA0150.1 | 0.744617 |
MA0151.1 | 0 |
MA0152.1 | 0.902317 |
MA0153.1 | 1.43021 |
MA0154.1 | 2.30945 |
MA0155.1 | 0.256269 |
MA0156.1 | 0.669101 |
MA0157.1 | 1.09377 |
MA0158.1 | 0 |
MA0159.1 | 0.565904 |
MA0160.1 | 0.871361 |
MA0161.1 | 0 |
MA0162.1 | 1.43223 |
MA0163.1 | 1.84145 |
MA0164.1 | 1.01792 |
MA0080.2 | 0.643061 |
MA0018.2 | 0.987913 |
MA0099.2 | 0.902716 |
MA0079.2 | 2.70224 |
MA0102.2 | 1.88331 |
MA0258.1 | 0.519674 |
MA0259.1 | 0.575594 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
CCNT2#905 | 3 | 6.33620157696263 | 0.00393075003576489 | 0.0190030830433389 |
CHD2#1106 | 3 | 10.3440228341169 | 0.000903370110274688 | 0.00660416288303081 |
E2F1#1869 | 3 | 4.90738921487932 | 0.00846098534723939 | 0.0325376260652601 |
E2F4#1874 | 3 | 12.6680603152844 | 0.000491798700629898 | 0.00437206030771927 |
EGR1#1958 | 3 | 4.98817909481014 | 0.00805648813738344 | 0.032061102140687 |
ETS1#2113 | 3 | 9.72876092220234 | 0.00108584009258484 | 0.00762277700003144 |
FOS#2353 | 3 | 8.9979553088944 | 0.00137249927241713 | 0.00897460878487181 |
GABPB1#2553 | 3 | 7.06768383618217 | 0.00283221282541742 | 0.0154099231713347 |
IRF1#3659 | 3 | 7.6371637535639 | 0.00224469274729724 | 0.0128070727033585 |
MXI1#4601 | 3 | 9.9615716287593 | 0.00101147054125902 | 0.00720284821072896 |
NFYA#4800 | 3 | 18.4255806998305 | 0.000159813550781416 | 0.0019965032811077 |
NFYB#4801 | 3 | 16.7597932535365 | 0.000212364992329618 | 0.00245834487185912 |
NRF1#4899 | 3 | 12.2102794477109 | 0.000549217240102001 | 0.00471165593387653 |
SIN3A#25942 | 3 | 5.40888472681514 | 0.00631896197799152 | 0.0276741757881267 |
SP1#6667 | 3 | 5.6983813781409 | 0.00540396270171217 | 0.0246499152954279 |
SP2#6668 | 3 | 26.1535304938446 | 5.58768218891694e-05 | 0.000940183567147246 |
ZBTB7A#51341 | 3 | 7.3519093078759 | 0.00251625586028227 | 0.014018737106157 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.