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FFCP PHASE1:Mm9::chr9:44887287..44887319,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=270152|HGNC=|MCL_coexpression_id=6|UniProt=Q80UL9|association_with_transcript=21bp_to_ENSMUST00000050020,NM_001005421,uc009pfd.2_5end|description=CAGE_peak_1_at_Amica1_5end|id=chr9:44887287..44887319,+|ontology_enrichment_celltype=CL:0000988!5.84e-08!32;CL:0002032!5.84e-08!32;CL:0000037!5.84e-08!32;CL:0000566!5.84e-08!32;CL:0000837!5.84e-08!32|ontology_enrichment_celltype_v019_2=CL:0000988,1.92e-12,32;CL:0002032,1.92e-12,32;CL:0000037,1.92e-12,32;CL:0000837,1.92e-12,32;CL:0002031,1.14e-10,25;CL:0000838,6.93e-09,12;CL:0000791,1.09e-08,9;CL:0000789,1.09e-08,9;CL:0002420,1.09e-08,9;CL:0002419,1.09e-08,9;CL:0000790,1.09e-08,9;CL:0000084,5.15e-08,11;CL:0000827,5.15e-08,11;CL:0000542,5.81e-08,13;CL:0000051,5.81e-08,13;CL:0002320,6.97e-08,46;CL:0000134,6.97e-08,46;CL:0000624,1.36e-07,8;CL:0000738,2.84e-07,17;CL:0002087,2.84e-07,17;CL:0000553,8.52e-07,6;CL:0000556,8.52e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.06e-15!48;UBERON:0002390!9.91e-14!45;UBERON:0003061!9.91e-14!45;UBERON:0004177!2.89e-09!29;UBERON:0002405!1.46e-08!70;UBERON:0001007!1.95e-07!128;UBERON:0001555!1.95e-07!128;UBERON:0007026!1.95e-07!128;UBERON:0004119!2.51e-07!130;UBERON:0000925!2.51e-07!130;UBERON:0006595!2.51e-07!130;UBERON:0003408!7.95e-07!24;UBERON:0004921!8.13e-07!126;UBERON:0004185!8.13e-07!126;UBERON:0003081!9.34e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.72e-20,48;UBERON:0002405,1.72e-20,48;UBERON:0002390,4.93e-18,45;UBERON:0003061,4.93e-18,45;UBERON:0004177,1.12e-12,29;UBERON:0005057,1.12e-12,29;UBERON:0000077,4.72e-11,35;UBERON:0001007,4.15e-10,116;UBERON:0001555,4.15e-10,116;UBERON:0007026,4.15e-10,116;UBERON:0004119,1.09e-09,118;UBERON:0000925,1.09e-09,118;UBERON:0006595,1.09e-09,118;UBERON:0004921,3.48e-09,114;UBERON:0003408,4.53e-09,24;UBERON:0002370,2.21e-08,23;UBERON:0000974,2.21e-08,23;UBERON:0004807,2.21e-08,23;UBERON:0005058,2.21e-08,23;UBERON:0003351,2.21e-08,23;UBERON:0009113,2.21e-08,23;UBERON:0003295,2.21e-08,23;UBERON:0009722,2.21e-08,23;UBERON:0005562,2.21e-08,23;UBERON:0007690,2.21e-08,23;UBERON:0001004,4.44e-08,42;UBERON:0002384,6.97e-08,46;UBERON:0006562,7.80e-08,24;UBERON:0001557,7.80e-08,24;UBERON:0001042,7.80e-08,24;UBERON:0008814,7.80e-08,24;UBERON:0009145,7.80e-08,24;UBERON:0000065,1.65e-07,41;UBERON:0003081,2.56e-07,87|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,3.74457637980571,6.47628121897667,5.85161315804984,1.71217968225505,1.7549874978974,5.30722262786738,2.88487327982691,3.33109761815663,6.68168382386426,1.39912375625629,12.9339487796877,12.4774134581222,12.7316895539409,1.53077922271926,1.58865521921416,0,3.35984087866154,3.21172993494038,0,0,0.215471232685889,2.09025761402011,4.28451220591882,3.54768817048488,0,0,0,0,0,0,30.5528090437943,20.3147189576188,12.5645698553712,162.35189069656,138.658233446564,63.11634589405,0,0,0,0,0,0,0,0,0,4.36234775750115,4.35217285206807,17.1407837562657,0,0.286533439938757,0.515672092277442,0,0,0,0,0,1.7997994345628,0.988866362566974,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.227178579999552,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,3.4255163915718,17.3488382043605,2.22663208597237,0,0.304465478312141,0,0.60289056221049,0.23517741427141,0,0,0.722996784599558,10.6153266233985,0.161766849947409,2.20841518460394,2.42437626567611,3.72783522436244,0.585561594023094,0.41889341362691,7.15279754584056,3.83408398418945,1.19980546198682,3.81210681219194,0,0,0,0.173824320192276,0,0,0,0,3.98102305952298,0.758168275301024,0.420883711772948,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0.348252166522167,0,0,3.51106593656617,1.54408744268829,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0.584799949701329,0.219550115291051,0.536825675041487,0,0,5.28670052774077,6.61126416658861,0,0,0.128867461322093,0.201683524623343,0,1.14135375667535,3.79623249235609,0.988193728344065,2.26201687920243,2.78539060857611,2.53453313254856,4.49409704327111,4.97117514711797,6.57166201739412,0,0,0,0,0,0.140271639780637,0.126473074248515,0.738050739898011,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.648540907100142,0,2.87536413054709,0,0.936113019343682,0,0,0,7.20537441649758,0,0,0,0,0.335012514883631,0.238043640886014,0.780534591431195,1.26108115284953,1.10732344824387,1.43509291791738,4.7520361267564,4.14443956478149,3.90552458170081,1.50791283939272,1.08781136763742,0.491764273019036,1.10374698521893,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0,0.162886959353576,0.989820737835213,0,0.242780636154981,0,0,0.590603785761546,0,1.03371317267288,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0.882113592219848,2.63818004706368,0,0.180938774784468,0.716234064018819,1.80554989719567,3.49777003955821,0,4.95525554313773,2.68302928352189,4.8150577116125,2.44878994106098,3.41735569302563,5.0331198105435,0.169978429993855,0.839708713941948,1.24379976423981,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,2.46268449254406,3.72803587852155,0,0,0,0,0.129159823477731,0,0.234714477291508,0.39061315453185,0,0,0,4.10814456816632,0,0.513554785824136,0.77952493786677,2.50637373934474,1.58945083825012,2.52410443991935,2.36303243479324,3.02899349844443,2.59103142626999,3.93222122033678,3.70339946811059,3.2712026157712,3.27255326108393,0.906921534460845,0,0,0,1.35232715822533,0.93841237725591,1.83151624267265,1.07184189539533,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0.271608227691724,1.12228454331548,0,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0,0.57386499620653,0.661774257358546,0.927471342481686|short_description=p1@Amica1}}
|EntrezGene=270152
|HGNC=
|MCL_coexpression_id=6
|UniProt=Q80UL9
|association_with_transcript=21bp_to_ENSMUST00000050020,NM_001005421,uc009pfd.2_5end
|description=CAGE_peak_1_at_Amica1_5end
|id=chr9:44887287..44887319,+
|ontology_enrichment_celltype=CL:0000988!5.84e-08!32;CL:0002032!5.84e-08!32;CL:0000037!5.84e-08!32;CL:0000566!5.84e-08!32;CL:0000837!5.84e-08!32
|ontology_enrichment_celltype_v019_2=CL:0000988,1.92e-12,32;CL:0002032,1.92e-12,32;CL:0000037,1.92e-12,32;CL:0000837,1.92e-12,32;CL:0002031,1.14e-10,25;CL:0000838,6.93e-09,12;CL:0000791,1.09e-08,9;CL:0000789,1.09e-08,9;CL:0002420,1.09e-08,9;CL:0002419,1.09e-08,9;CL:0000790,1.09e-08,9;CL:0000084,5.15e-08,11;CL:0000827,5.15e-08,11;CL:0000542,5.81e-08,13;CL:0000051,5.81e-08,13;CL:0002320,6.97e-08,46;CL:0000134,6.97e-08,46;CL:0000624,1.36e-07,8;CL:0000738,2.84e-07,17;CL:0002087,2.84e-07,17;CL:0000553,8.52e-07,6;CL:0000556,8.52e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!2.06e-15!48;UBERON:0002390!9.91e-14!45;UBERON:0003061!9.91e-14!45;UBERON:0004177!2.89e-09!29;UBERON:0002405!1.46e-08!70;UBERON:0001007!1.95e-07!128;UBERON:0001555!1.95e-07!128;UBERON:0007026!1.95e-07!128;UBERON:0004119!2.51e-07!130;UBERON:0000925!2.51e-07!130;UBERON:0006595!2.51e-07!130;UBERON:0003408!7.95e-07!24;UBERON:0004921!8.13e-07!126;UBERON:0004185!8.13e-07!126;UBERON:0003081!9.34e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.72e-20,48;UBERON:0002405,1.72e-20,48;UBERON:0002390,4.93e-18,45;UBERON:0003061,4.93e-18,45;UBERON:0004177,1.12e-12,29;UBERON:0005057,1.12e-12,29;UBERON:0000077,4.72e-11,35;UBERON:0001007,4.15e-10,116;UBERON:0001555,4.15e-10,116;UBERON:0007026,4.15e-10,116;UBERON:0004119,1.09e-09,118;UBERON:0000925,1.09e-09,118;UBERON:0006595,1.09e-09,118;UBERON:0004921,3.48e-09,114;UBERON:0003408,4.53e-09,24;UBERON:0002370,2.21e-08,23;UBERON:0000974,2.21e-08,23;UBERON:0004807,2.21e-08,23;UBERON:0005058,2.21e-08,23;UBERON:0003351,2.21e-08,23;UBERON:0009113,2.21e-08,23;UBERON:0003295,2.21e-08,23;UBERON:0009722,2.21e-08,23;UBERON:0005562,2.21e-08,23;UBERON:0007690,2.21e-08,23;UBERON:0001004,4.44e-08,42;UBERON:0002384,6.97e-08,46;UBERON:0006562,7.80e-08,24;UBERON:0001557,7.80e-08,24;UBERON:0001042,7.80e-08,24;UBERON:0008814,7.80e-08,24;UBERON:0009145,7.80e-08,24;UBERON:0000065,1.65e-07,41;UBERON:0003081,2.56e-07,87
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,3.74457637980571,6.47628121897667,5.85161315804984,1.71217968225505,1.7549874978974,5.30722262786738,2.88487327982691,3.33109761815663,6.68168382386426,1.39912375625629,12.9339487796877,12.4774134581222,12.7316895539409,1.53077922271926,1.58865521921416,0,3.35984087866154,3.21172993494038,0,0,0.215471232685889,2.09025761402011,4.28451220591882,3.54768817048488,0,0,0,0,0,0,30.5528090437943,20.3147189576188,12.5645698553712,162.35189069656,138.658233446564,63.11634589405,0,0,0,0,0,0,0,0,0,4.36234775750115,4.35217285206807,17.1407837562657,0,0.286533439938757,0.515672092277442,0,0,0,0,0,1.7997994345628,0.988866362566974,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.227178579999552,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,3.4255163915718,17.3488382043605,2.22663208597237,0,0.304465478312141,0,0.60289056221049,0.23517741427141,0,0,0.722996784599558,10.6153266233985,0.161766849947409,2.20841518460394,2.42437626567611,3.72783522436244,0.585561594023094,0.41889341362691,7.15279754584056,3.83408398418945,1.19980546198682,3.81210681219194,0,0,0,0.173824320192276,0,0,0,0,3.98102305952298,0.758168275301024,0.420883711772948,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0.348252166522167,0,0,3.51106593656617,1.54408744268829,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0.584799949701329,0.219550115291051,0.536825675041487,0,0,5.28670052774077,6.61126416658861,0,0,0.128867461322093,0.201683524623343,0,1.14135375667535,3.79623249235609,0.988193728344065,2.26201687920243,2.78539060857611,2.53453313254856,4.49409704327111,4.97117514711797,6.57166201739412,0,0,0,0,0,0.140271639780637,0.126473074248515,0.738050739898011,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.648540907100142,0,2.87536413054709,0,0.936113019343682,0,0,0,7.20537441649758,0,0,0,0,0.335012514883631,0.238043640886014,0.780534591431195,1.26108115284953,1.10732344824387,1.43509291791738,4.7520361267564,4.14443956478149,3.90552458170081,1.50791283939272,1.08781136763742,0.491764273019036,1.10374698521893,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0,0.162886959353576,0.989820737835213,0,0.242780636154981,0,0,0.590603785761546,0,1.03371317267288,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0.882113592219848,2.63818004706368,0,0.180938774784468,0.716234064018819,1.80554989719567,3.49777003955821,0,4.95525554313773,2.68302928352189,4.8150577116125,2.44878994106098,3.41735569302563,5.0331198105435,0.169978429993855,0.839708713941948,1.24379976423981,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,2.46268449254406,3.72803587852155,0,0,0,0,0.129159823477731,0,0.234714477291508,0.39061315453185,0,0,0,4.10814456816632,0,0.513554785824136,0.77952493786677,2.50637373934474,1.58945083825012,2.52410443991935,2.36303243479324,3.02899349844443,2.59103142626999,3.93222122033678,3.70339946811059,3.2712026157712,3.27255326108393,0.906921534460845,0,0,0,1.35232715822533,0.93841237725591,1.83151624267265,1.07184189539533,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0.271608227691724,1.12228454331548,0,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0,0.57386499620653,0.661774257358546,0.927471342481686
|short_description=p1@Amica1
}}

Revision as of 17:59, 14 September 2013

Short description:p1@Amica1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Amica1_5end
Coexpression cluster:MCL_coexpression_mm9:6
Association with transcript: 21bp_to_ENSMUST00000050020, NM_001005421, uc009pfd.2_5end
EntrezGene:Amica1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Amica1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.48
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.68
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.93
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.48
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.73
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G830.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H120.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9162.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2138.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H463.12
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.14
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H917.35
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G16.57
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B17.21
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A44.75
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G24.96
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E43.93
thymus, neonate N20.CNhs11186.820-7A23.70
thymus, neonate N25.CNhs11125.1362-25G73.27
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.72e-2048
immune system1.72e-2048
hematopoietic system4.93e-1845
blood island4.93e-1845
hemopoietic organ1.12e-1229
immune organ1.12e-1229
mixed endoderm/mesoderm-derived structure4.72e-1135
digestive system4.15e-10116
digestive tract4.15e-10116
primitive gut4.15e-10116
endoderm-derived structure1.09e-09118
endoderm1.09e-09118
presumptive endoderm1.09e-09118
subdivision of digestive tract3.48e-09114
gland of gut4.53e-0924
thymus2.21e-0823
neck2.21e-0823
respiratory system epithelium2.21e-0823
hemolymphoid system gland2.21e-0823
pharyngeal epithelium2.21e-0823
thymic region2.21e-0823
pharyngeal gland2.21e-0823
entire pharyngeal arch endoderm2.21e-0823
thymus primordium2.21e-0823
early pharyngeal endoderm2.21e-0823
respiratory system4.44e-0842
connective tissue6.97e-0846
pharynx7.80e-0824
upper respiratory tract7.80e-0824
chordate pharynx7.80e-0824
pharyngeal arch system7.80e-0824
pharyngeal region of foregut7.80e-0824
respiratory tract1.65e-0741
lateral plate mesoderm2.56e-0787







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