FFCP PHASE1:Mm9::chr7:142887471..142887487,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=82|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:142887471..142887487,-|id=chr7:142887471..142887487,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!3.58e-09!147;UBERON:0001041!2.80e-08!92;UBERON:0000926!1.57e-07!193;UBERON:0004120!1.57e-07!193;UBERON:0006603!1.57e-07!193;UBERON:0003104!2.29e-07!131;UBERON:0009142!2.29e-07!131;UBERON:0000077!6.13e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.00e-12,29;UBERON:0005057,5.00e-12,29;UBERON:0001041,5.02e-09,80;UBERON:0000077,5.30e-09,35;UBERON:0002390,1.20e-08,45;UBERON:0003061,1.20e-08,45;UBERON:0002106,6.75e-08,6;UBERON:0004457,6.75e-08,6;UBERON:0000042,6.75e-08,6;UBERON:0004854,6.75e-08,6;UBERON:0009034,6.75e-08,6;UBERON:0002095,6.75e-08,6;UBERON:0004782,6.75e-08,6;UBERON:0003281,6.75e-08,6;UBERON:0009664,6.75e-08,6;UBERON:0002296,6.75e-08,6;UBERON:0005602,6.75e-08,6;UBERON:0001179,6.75e-08,6;UBERON:0006293,6.75e-08,6;UBERON:0002193,1.01e-07,48;UBERON:0002405,1.01e-07,48;UBERON:0001048,1.14e-07,134;UBERON:0000949,6.91e-07,72;UBERON:0002370,7.03e-07,23;UBERON:0000974,7.03e-07,23;UBERON:0004807,7.03e-07,23;UBERON:0005058,7.03e-07,23;UBERON:0003351,7.03e-07,23;UBERON:0009113,7.03e-07,23;UBERON:0003295,7.03e-07,23;UBERON:0009722,7.03e-07,23;UBERON:0005562,7.03e-07,23;UBERON:0007690,7.03e-07,23|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.82227740650843,4.19737126876888,0.157731082679119,0.274228867211478,0,0,0.297872853602656,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0,0,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,1.02258193546835,0,0.70667914902068,0,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,0,0.346970653532272,0.608930956624282,1.15307748628029,1.50722640552623,0.705532242814229,0.251333182659351,0,0,0,0.323533699894818,1.98757366614354,4.84875253135222,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0.502617408451458,0,0,0,0,0.916554274652847,0.995255764880744,0,0,1.69156575851515,0,0,1.9591626318643,0.884474488967262,1.7935920839879,0.187403449119458,0.258703370739016,0.215567992932842,0.378212160335639,0.351902248327898,0.219195732427575,3.33656699070717,0.696504333044333,0.411564272815887,0,0,0,0.284163499395593,0,1.64168241986767,1.80062061461015,0.473489471170421,1.18058539048442,3.23960937063494,1.62773761325285,0.804820204198858,0.700592054203017,0.987359099480883,0.656669856316381,0.243206428637567,0,0.219550115291051,0,0,0,0.330418782983798,0,2.34617075588757,2.32236671860439,0.515469845288373,0.605050573870028,0,0.570676878337677,0.949058123089023,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,2.16138049874694,0,0,3.42745537829186,0,3.05476991767971,1.16371492300575,1.40271639780637,0.505892296994058,0.442830443938806,0.31399745568275,0,0,3.00321190288969,1.57247196090562,3.14806957338795,0.811440485554012,0.964708639009667,1.78238096246994,1.43848068725405,5.67473293712624,3.0201755450689,53.1942364151212,0.372140947668503,0.936113019343682,0.505157755894224,0.179397413521912,0,0.184753190166605,0.189491411770485,0.488894929326078,1.35796068620151,2.58159273117352,0.502518772325447,0.238043640886014,0.390267295715598,0.630540576424764,1.99318220683897,0.637819074629948,0,0.863424909329478,0.144649058581512,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,1.17131623288992,1.29254038639679,0.477937595905104,0.445597348164788,0,0.404810701674894,0.292255857911312,0.790575555893047,0,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,0,1.69946445308487,0.302323556964751,2.26326095707078,0.295301892880773,0,0,1.09060118843252,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,0,0.720244376125241,0.129358683782755,0,0.177340233642274,0.891844088010353,0.164549020602121,0,0,0,0,0,0.322928853391811,0.180938774784468,0.477489376012546,0.164140899745061,2.04036585640896,0,1.53783792718067,1.03193433981611,2.40752885580625,18.4601087864597,23.9214898511794,6.40578884978263,0,0,0,0,0.474503990371703,0.406638934253697,1.72808545314882,1.88179466413022,0.87345025498471,1.21377911746339,0.41326727862668,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,1.68956125490778,1.29092962510329,1.5624526181274,0.104859344425711,1.20792060413003,0.288030006257865,1.26404448251271,0.405450430580328,1.43795340030758,2.5984164595559,0.716106782669926,2.18549490259391,2.76449533895928,2.36303243479324,2.42319479875554,3.35309949281999,4.2346997757473,3.41102582589133,2.69393156592922,2.10378423926824,0,0.221985953374065,0.3588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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=82 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:142887471..142887487,- | |||
|id=chr7:142887471..142887487,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!3.58e-09!147;UBERON:0001041!2.80e-08!92;UBERON:0000926!1.57e-07!193;UBERON:0004120!1.57e-07!193;UBERON:0006603!1.57e-07!193;UBERON:0003104!2.29e-07!131;UBERON:0009142!2.29e-07!131;UBERON:0000077!6.13e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.00e-12,29;UBERON:0005057,5.00e-12,29;UBERON:0001041,5.02e-09,80;UBERON:0000077,5.30e-09,35;UBERON:0002390,1.20e-08,45;UBERON:0003061,1.20e-08,45;UBERON:0002106,6.75e-08,6;UBERON:0004457,6.75e-08,6;UBERON:0000042,6.75e-08,6;UBERON:0004854,6.75e-08,6;UBERON:0009034,6.75e-08,6;UBERON:0002095,6.75e-08,6;UBERON:0004782,6.75e-08,6;UBERON:0003281,6.75e-08,6;UBERON:0009664,6.75e-08,6;UBERON:0002296,6.75e-08,6;UBERON:0005602,6.75e-08,6;UBERON:0001179,6.75e-08,6;UBERON:0006293,6.75e-08,6;UBERON:0002193,1.01e-07,48;UBERON:0002405,1.01e-07,48;UBERON:0001048,1.14e-07,134;UBERON:0000949,6.91e-07,72;UBERON:0002370,7.03e-07,23;UBERON:0000974,7.03e-07,23;UBERON:0004807,7.03e-07,23;UBERON:0005058,7.03e-07,23;UBERON:0003351,7.03e-07,23;UBERON:0009113,7.03e-07,23;UBERON:0003295,7.03e-07,23;UBERON:0009722,7.03e-07,23;UBERON:0005562,7.03e-07,23;UBERON:0007690,7.03e-07,23 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.82227740650843,4.19737126876888,0.157731082679119,0.274228867211478,0,0,0.297872853602656,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0,0,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,1.02258193546835,0,0.70667914902068,0,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,0,0.346970653532272,0.608930956624282,1.15307748628029,1.50722640552623,0.705532242814229,0.251333182659351,0,0,0,0.323533699894818,1.98757366614354,4.84875253135222,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0.502617408451458,0,0,0,0,0.916554274652847,0.995255764880744,0,0,1.69156575851515,0,0,1.9591626318643,0.884474488967262,1.7935920839879,0.187403449119458,0.258703370739016,0.215567992932842,0.378212160335639,0.351902248327898,0.219195732427575,3.33656699070717,0.696504333044333,0.411564272815887,0,0,0,0.284163499395593,0,1.64168241986767,1.80062061461015,0.473489471170421,1.18058539048442,3.23960937063494,1.62773761325285,0.804820204198858,0.700592054203017,0.987359099480883,0.656669856316381,0.243206428637567,0,0.219550115291051,0,0,0,0.330418782983798,0,2.34617075588757,2.32236671860439,0.515469845288373,0.605050573870028,0,0.570676878337677,0.949058123089023,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,2.16138049874694,0,0,3.42745537829186,0,3.05476991767971,1.16371492300575,1.40271639780637,0.505892296994058,0.442830443938806,0.31399745568275,0,0,3.00321190288969,1.57247196090562,3.14806957338795,0.811440485554012,0.964708639009667,1.78238096246994,1.43848068725405,5.67473293712624,3.0201755450689,53.1942364151212,0.372140947668503,0.936113019343682,0.505157755894224,0.179397413521912,0,0.184753190166605,0.189491411770485,0.488894929326078,1.35796068620151,2.58159273117352,0.502518772325447,0.238043640886014,0.390267295715598,0.630540576424764,1.99318220683897,0.637819074629948,0,0.863424909329478,0.144649058581512,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,1.17131623288992,1.29254038639679,0.477937595905104,0.445597348164788,0,0.404810701674894,0.292255857911312,0.790575555893047,0,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,0,1.69946445308487,0.302323556964751,2.26326095707078,0.295301892880773,0,0,1.09060118843252,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,0,0.720244376125241,0.129358683782755,0,0.177340233642274,0.891844088010353,0.164549020602121,0,0,0,0,0,0.322928853391811,0.180938774784468,0.477489376012546,0.164140899745061,2.04036585640896,0,1.53783792718067,1.03193433981611,2.40752885580625,18.4601087864597,23.9214898511794,6.40578884978263,0,0,0,0,0.474503990371703,0.406638934253697,1.72808545314882,1.88179466413022,0.87345025498471,1.21377911746339,0.41326727862668,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,1.68956125490778,1.29092962510329,1.5624526181274,0.104859344425711,1.20792060413003,0.288030006257865,1.26404448251271,0.405450430580328,1.43795340030758,2.5984164595559,0.716106782669926,2.18549490259391,2.76449533895928,2.36303243479324,2.42319479875554,3.35309949281999,4.2346997757473,3.41102582589133,2.69393156592922,2.10378423926824,0,0.221985953374065,0.358855426437903,0.335769232728157,0,0,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,1.24544817101012,0.798049746802062,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.962757628775446,0.252697211763798,0,0.754505365544305,1.31098110457835,0.960377286073039,0.631790158511746,1.42888107384922,0.811190281613988,0.578727661391115,0,0.588795680537589,2.40008476669791,2.48466128623072,0.238436189947321,0.581385666529314,0.658765662907314,0.676916863133412,2.0122077016005,1.05227884575137,0.679020569229309,0.561142271657738,0.237270036248348,1.57607171800902,0.409231043169689,0,0.385813221962283,0,0.233931608445408,0,0.191288332068843,0,0.463735671240843 | |||
|short_description=p@chr7:142887471..142887487,- | |||
}} |
Revision as of 12:08, 14 September 2013
Short description: | p@chr7:142887471..142887487, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:142887471..142887487, - |
Coexpression cluster: | MCL_coexpression_mm9:82 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 5.00e-12 | 29 |
immune organ | 5.00e-12 | 29 |
foregut | 5.02e-09 | 80 |
mixed endoderm/mesoderm-derived structure | 5.30e-09 | 35 |
hematopoietic system | 1.20e-08 | 45 |
blood island | 1.20e-08 | 45 |
spleen | 6.75e-08 | 6 |
cavity lining | 6.75e-08 | 6 |
serous membrane | 6.75e-08 | 6 |
gastrointestinal system mesentery | 6.75e-08 | 6 |
stomach region | 6.75e-08 | 6 |
mesentery | 6.75e-08 | 6 |
gastrointestinal system serosa | 6.75e-08 | 6 |
mesentery of stomach | 6.75e-08 | 6 |
gut mesentery | 6.75e-08 | 6 |
dorsal mesentery | 6.75e-08 | 6 |
dorsal mesogastrium | 6.75e-08 | 6 |
peritoneal cavity | 6.75e-08 | 6 |
spleen primordium | 6.75e-08 | 6 |
hemolymphoid system | 1.01e-07 | 48 |
immune system | 1.01e-07 | 48 |
primordium | 1.14e-07 | 134 |
endocrine system | 6.91e-07 | 72 |
thymus | 7.03e-07 | 23 |
neck | 7.03e-07 | 23 |
respiratory system epithelium | 7.03e-07 | 23 |
hemolymphoid system gland | 7.03e-07 | 23 |
pharyngeal epithelium | 7.03e-07 | 23 |
thymic region | 7.03e-07 | 23 |
pharyngeal gland | 7.03e-07 | 23 |
entire pharyngeal arch endoderm | 7.03e-07 | 23 |
thymus primordium | 7.03e-07 | 23 |
early pharyngeal endoderm | 7.03e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.