FFCP PHASE1:Hg19::chr9:683039..683053,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C703|description=CAGE_peak_at_chr9:683039..683053,+|id=chr9:683039..683053,+|ontology_enrichment_celltype=CL:0000181!8.33e-11!12;CL:0000417!8.33e-11!12;CL:0000668!8.33e-11!12;CL:0000414!8.33e-11!12;CL:0000412!8.33e-11!12;CL:0000182!8.33e-11!12|ontology_enrichment_celltype_v019=CL:0000182;3.61e-34;12!CL:0002563;3.73e-09;4|ontology_enrichment_celltype_v019_2=CL:0000182,3.53e-34,12;CL:0000223,5.69e-13,58;CL:0002563,3.44e-09,4|ontology_enrichment_development_v019=UBERON:0004161;1.59e-27;11!UBERON:0009497;3.11e-23;13!UBERON:0003104;3.69e-16;31!UBERON:0001041;4.19e-13;30!CL:0000223;1.23e-08;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.12e-24!115;UBERON:0000477!4.52e-11!286;UBERON:0005057!7.30e-11!26;UBERON:0004111!4.08e-10!241;UBERON:0003929!5.22e-10!54;UBERON:0001049!5.71e-10!57;UBERON:0005068!5.71e-10!57;UBERON:0006241!5.71e-10!57;UBERON:0007135!5.71e-10!57;UBERON:0000955!5.95e-10!69;UBERON:0006238!5.95e-10!69;UBERON:0002107!7.58e-10!19;UBERON:0006925!7.58e-10!19;UBERON:0008836!7.58e-10!19;UBERON:0002368!1.21e-09!35;UBERON:0002616!1.90e-09!59;UBERON:0003075!3.41e-09!86;UBERON:0007284!3.41e-09!86;UBERON:0000025!4.03e-09!194;UBERON:0005743!4.36e-09!86;UBERON:0001017!5.66e-09!82;UBERON:0004921!8.63e-09!129;UBERON:0004185!8.63e-09!129;UBERON:0000481!1.11e-08!347;UBERON:0002530!1.17e-08!59;UBERON:0002346!1.75e-08!90;UBERON:0000119!2.53e-08!312;UBERON:0009497!3.37e-08!25;UBERON:0000015!3.37e-08!25;UBERON:0002423!3.37e-08!25;UBERON:0006235!3.37e-08!25;UBERON:0004161!3.37e-08!25;UBERON:0002780!3.49e-08!41;UBERON:0001890!3.49e-08!41;UBERON:0006240!3.49e-08!41;UBERON:0008835!3.70e-08!22;UBERON:0003894!3.70e-08!22;UBERON:0000483!4.35e-08!309;UBERON:0003080!6.72e-08!42;UBERON:0005911!7.55e-08!82;UBERON:0000949!9.04e-08!45;UBERON:0009854!1.07e-07!23;UBERON:0000073!1.32e-07!94;UBERON:0001016!1.32e-07!94;UBERON:0001007!1.69e-07!155;UBERON:0001555!1.69e-07!155;UBERON:0007026!1.69e-07!155;UBERON:0002365!1.88e-07!31;UBERON:0002330!1.88e-07!31;UBERON:0007499!6.90e-07!25;UBERON:0001893!7.06e-07!34|ontology_enrichment_uberon_v019=UBERON:0002107;3.95e-35;19!UBERON:0006925;3.95e-35;19!UBERON:0002423;2.12e-26;25!UBERON:0002365;2.01e-20;31!UBERON:0002330;2.01e-20;31!UBERON:0002368;6.80e-18;33!UBERON:0000949;5.29e-15;43!UBERON:0000160;3.04e-11;17!UBERON:0002530;3.24e-10;57!UBERON:0002146;1.91e-09;1!UBERON:0005623;1.91e-09;1!UBERON:0001242;3.73e-09;4!UBERON:0001262;3.73e-09;4!UBERON:0004786;3.73e-09;4!UBERON:0004808;3.73e-09;4!UBERON:0001277;3.73e-09;4!UBERON:0001007;4.52e-09;81!UBERON:0005409;9.11e-09;22!UBERON:0005172;6.75e-08;52!UBERON:0005173;6.75e-08;52!UBERON:0002108;1.72e-07;4!UBERON:0002417;2.25e-07;58!UBERON:0000916;2.25e-07;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.88e-35,19;UBERON:0006925,3.88e-35,19;UBERON:0008836,3.88e-35,19;UBERON:0008835,3.53e-30,22;UBERON:0003894,3.53e-30,22;UBERON:0009854,8.21e-29,23;UBERON:0007499,2.09e-26,25;UBERON:0009497,2.09e-26,25;UBERON:0000015,2.09e-26,25;UBERON:0002423,2.09e-26,25;UBERON:0006235,2.09e-26,25;UBERON:0004161,2.09e-26,25;UBERON:0009856,2.42e-25,26;UBERON:0003929,4.63e-24,54;UBERON:0002365,4.76e-21,31;UBERON:0002330,4.76e-21,31;UBERON:0004921,1.35e-19,118;UBERON:0002368,1.70e-18,35;UBERON:0005911,1.31e-17,82;UBERON:0000949,2.38e-17,45;UBERON:0002530,1.61e-15,59;UBERON:0001007,2.14e-15,145;UBERON:0001555,2.14e-15,145;UBERON:0007026,2.14e-15,145;UBERON:0004119,1.14e-13,160;UBERON:0000925,1.14e-13,160;UBERON:0006595,1.14e-13,160;UBERON:0005172,1.60e-11,54;UBERON:0005173,1.60e-11,54;UBERON:0000160,2.97e-11,17;UBERON:0002417,3.09e-10,60;UBERON:0000916,3.09e-10,60;UBERON:0005177,5.37e-10,101;UBERON:0001041,5.70e-10,87;UBERON:0002146,2.26e-09,1;UBERON:0005623,2.26e-09,1;UBERON:0001242,3.44e-09,4;UBERON:0001262,3.44e-09,4;UBERON:0004786,3.44e-09,4;UBERON:0004808,3.44e-09,4;UBERON:0001277,3.44e-09,4;UBERON:0011216,9.03e-09,223;UBERON:0005409,9.65e-08,25;UBERON:0002108,2.02e-07,4;UBERON:0000490,2.39e-07,148;UBERON:0009569,2.44e-07,112|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0.662794751455832,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3510069643662,6.87979051674338,37.81055402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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C703 | |||
|description=CAGE_peak_at_chr9:683039..683053,+ | |||
|id=chr9:683039..683053,+ | |||
|ontology_enrichment_celltype=CL:0000181!8.33e-11!12;CL:0000417!8.33e-11!12;CL:0000668!8.33e-11!12;CL:0000414!8.33e-11!12;CL:0000412!8.33e-11!12;CL:0000182!8.33e-11!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.61e-34;12!CL:0002563;3.73e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.53e-34,12;CL:0000223,5.69e-13,58;CL:0002563,3.44e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.59e-27;11!UBERON:0009497;3.11e-23;13!UBERON:0003104;3.69e-16;31!UBERON:0001041;4.19e-13;30!CL:0000223;1.23e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-24!115;UBERON:0000477!4.52e-11!286;UBERON:0005057!7.30e-11!26;UBERON:0004111!4.08e-10!241;UBERON:0003929!5.22e-10!54;UBERON:0001049!5.71e-10!57;UBERON:0005068!5.71e-10!57;UBERON:0006241!5.71e-10!57;UBERON:0007135!5.71e-10!57;UBERON:0000955!5.95e-10!69;UBERON:0006238!5.95e-10!69;UBERON:0002107!7.58e-10!19;UBERON:0006925!7.58e-10!19;UBERON:0008836!7.58e-10!19;UBERON:0002368!1.21e-09!35;UBERON:0002616!1.90e-09!59;UBERON:0003075!3.41e-09!86;UBERON:0007284!3.41e-09!86;UBERON:0000025!4.03e-09!194;UBERON:0005743!4.36e-09!86;UBERON:0001017!5.66e-09!82;UBERON:0004921!8.63e-09!129;UBERON:0004185!8.63e-09!129;UBERON:0000481!1.11e-08!347;UBERON:0002530!1.17e-08!59;UBERON:0002346!1.75e-08!90;UBERON:0000119!2.53e-08!312;UBERON:0009497!3.37e-08!25;UBERON:0000015!3.37e-08!25;UBERON:0002423!3.37e-08!25;UBERON:0006235!3.37e-08!25;UBERON:0004161!3.37e-08!25;UBERON:0002780!3.49e-08!41;UBERON:0001890!3.49e-08!41;UBERON:0006240!3.49e-08!41;UBERON:0008835!3.70e-08!22;UBERON:0003894!3.70e-08!22;UBERON:0000483!4.35e-08!309;UBERON:0003080!6.72e-08!42;UBERON:0005911!7.55e-08!82;UBERON:0000949!9.04e-08!45;UBERON:0009854!1.07e-07!23;UBERON:0000073!1.32e-07!94;UBERON:0001016!1.32e-07!94;UBERON:0001007!1.69e-07!155;UBERON:0001555!1.69e-07!155;UBERON:0007026!1.69e-07!155;UBERON:0002365!1.88e-07!31;UBERON:0002330!1.88e-07!31;UBERON:0007499!6.90e-07!25;UBERON:0001893!7.06e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.95e-35;19!UBERON:0006925;3.95e-35;19!UBERON:0002423;2.12e-26;25!UBERON:0002365;2.01e-20;31!UBERON:0002330;2.01e-20;31!UBERON:0002368;6.80e-18;33!UBERON:0000949;5.29e-15;43!UBERON:0000160;3.04e-11;17!UBERON:0002530;3.24e-10;57!UBERON:0002146;1.91e-09;1!UBERON:0005623;1.91e-09;1!UBERON:0001242;3.73e-09;4!UBERON:0001262;3.73e-09;4!UBERON:0004786;3.73e-09;4!UBERON:0004808;3.73e-09;4!UBERON:0001277;3.73e-09;4!UBERON:0001007;4.52e-09;81!UBERON:0005409;9.11e-09;22!UBERON:0005172;6.75e-08;52!UBERON:0005173;6.75e-08;52!UBERON:0002108;1.72e-07;4!UBERON:0002417;2.25e-07;58!UBERON:0000916;2.25e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.88e-35,19;UBERON:0006925,3.88e-35,19;UBERON:0008836,3.88e-35,19;UBERON:0008835,3.53e-30,22;UBERON:0003894,3.53e-30,22;UBERON:0009854,8.21e-29,23;UBERON:0007499,2.09e-26,25;UBERON:0009497,2.09e-26,25;UBERON:0000015,2.09e-26,25;UBERON:0002423,2.09e-26,25;UBERON:0006235,2.09e-26,25;UBERON:0004161,2.09e-26,25;UBERON:0009856,2.42e-25,26;UBERON:0003929,4.63e-24,54;UBERON:0002365,4.76e-21,31;UBERON:0002330,4.76e-21,31;UBERON:0004921,1.35e-19,118;UBERON:0002368,1.70e-18,35;UBERON:0005911,1.31e-17,82;UBERON:0000949,2.38e-17,45;UBERON:0002530,1.61e-15,59;UBERON:0001007,2.14e-15,145;UBERON:0001555,2.14e-15,145;UBERON:0007026,2.14e-15,145;UBERON:0004119,1.14e-13,160;UBERON:0000925,1.14e-13,160;UBERON:0006595,1.14e-13,160;UBERON:0005172,1.60e-11,54;UBERON:0005173,1.60e-11,54;UBERON:0000160,2.97e-11,17;UBERON:0002417,3.09e-10,60;UBERON:0000916,3.09e-10,60;UBERON:0005177,5.37e-10,101;UBERON:0001041,5.70e-10,87;UBERON:0002146,2.26e-09,1;UBERON:0005623,2.26e-09,1;UBERON:0001242,3.44e-09,4;UBERON:0001262,3.44e-09,4;UBERON:0004786,3.44e-09,4;UBERON:0004808,3.44e-09,4;UBERON:0001277,3.44e-09,4;UBERON:0011216,9.03e-09,223;UBERON:0005409,9.65e-08,25;UBERON:0002108,2.02e-07,4;UBERON:0000490,2.39e-07,148;UBERON:0009569,2.44e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0.662794751455832,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3510069643662,6.87979051674338,37.8105540276099,0,2.58275720940538,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9899562596581,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3350609677843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,16.6275613583822,0,0,0,0,0,0,0.690503839458535,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55488378577335,0,0,0.353830258013357,1.83309043480088,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,13.5560048310952,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0.279282401272254,1.14580212005842,0,0,0.429226048136571,0,0.335917362433631,0,2.32991899054908,23.7925210567815,20.4391328785293,22.0409588403185,0.393709926058995,0,0,0,0,0,0,0,0,0.364497339948148,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.2156257734316,14.5757577803443,0,0.13223260174269,0,0,0.213574825135389,1.57204305099666,0.828478110694391,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0.310482014706917,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0,0.615349092722265,0,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,1.56302802246618,0,0,0,0.270150338473579,0,0.206686796501184,0.380494861163441,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,1.0989032999072,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853425474875886,0,0,0,0,0,0,0,0,0,0.452888530700021,0.154348316215889,1.09279780251979,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0.407948941145488,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0.23806443146374,0.258355639344024,0.931120714437869,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0,1.33064142618405,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p@chr9:683039..683053,+ | |||
}} |
Revision as of 09:12, 14 September 2013
Short description: | p@chr9:683039..683053, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:683039..683053, + |
Coexpression cluster: | C703_liver_hepatocellular_Hepatocyte_hepatoblastoma_colon_gastrointestinal_mature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.53e-34 | 12 |
endodermal cell | 5.69e-13 | 58 |
intestinal epithelial cell | 3.44e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.