FFCP PHASE1:Mm9::chr5:66472210..66472248,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=245945|HGNC=|MCL_coexpression_id=297|UniProt=Q91WT8,D3Z5E3|association_with_transcript=0bp_to_ENSMUST00000113724,ENSMUST00000127275,uc008xok.2_5end|description=CAGE_peak_2_at_Rbm47_5end|id=chr5:66472210..66472248,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,3.15e-07,25;CL:0002563,7.21e-07,9;CL:0002251,7.21e-07,9;CL:0000223,9.16e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.06e-25!130;UBERON:0000925!1.06e-25!130;UBERON:0006595!1.06e-25!130;UBERON:0001007!2.45e-25!128;UBERON:0001555!2.45e-25!128;UBERON:0007026!2.45e-25!128;UBERON:0004921!3.69e-24!126;UBERON:0004185!3.69e-24!126;UBERON:0005409!4.01e-23!59;UBERON:0000160!3.50e-22!43;UBERON:0005177!1.13e-12!85;UBERON:0009569!1.43e-11!66;UBERON:0005172!7.75e-10!49;UBERON:0005173!7.75e-10!49;UBERON:0002417!7.75e-10!49;UBERON:0000916!7.75e-10!49;UBERON:0000344!8.83e-10!15;UBERON:0009854!1.02e-09!23;UBERON:0009856!1.02e-09!23;UBERON:0002107!5.11e-09!22;UBERON:0007499!5.11e-09!22;UBERON:0006925!5.11e-09!22;UBERON:0009497!5.11e-09!22;UBERON:0000015!5.11e-09!22;UBERON:0002423!5.11e-09!22;UBERON:0006235!5.11e-09!22;UBERON:0008835!5.11e-09!22;UBERON:0003894!5.11e-09!22;UBERON:0004161!5.11e-09!22;UBERON:0008836!5.11e-09!22;UBERON:0001242!7.90e-09!13;UBERON:0000060!7.90e-09!13;UBERON:0001262!7.90e-09!13;UBERON:0004786!7.90e-09!13;UBERON:0002100!9.10e-09!98;UBERON:0000077!1.43e-08!97;UBERON:0000466!1.43e-08!79;UBERON:0002365!5.59e-08!25;UBERON:0002330!5.59e-08!25;UBERON:0003104!9.33e-08!131;UBERON:0009142!9.33e-08!131;UBERON:0001041!1.03e-07!92;UBERON:0000481!3.95e-07!230;UBERON:0002108!5.35e-07!16;UBERON:0001008!8.33e-07!17;UBERON:0006554!8.35e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.15e-21,47;UBERON:0000160,1.21e-20,31;UBERON:0004119,1.28e-20,118;UBERON:0000925,1.28e-20,118;UBERON:0006595,1.28e-20,118;UBERON:0001007,2.84e-20,116;UBERON:0001555,2.84e-20,116;UBERON:0007026,2.84e-20,116;UBERON:0004921,3.83e-19,114;UBERON:0005177,9.19e-15,79;UBERON:0002100,1.49e-11,90;UBERON:0000344,1.02e-10,15;UBERON:0009854,1.19e-10,23;UBERON:0009856,1.19e-10,23;UBERON:0009569,2.10e-10,66;UBERON:0002107,7.17e-10,22;UBERON:0007499,7.17e-10,22;UBERON:0006925,7.17e-10,22;UBERON:0009497,7.17e-10,22;UBERON:0000015,7.17e-10,22;UBERON:0002423,7.17e-10,22;UBERON:0006235,7.17e-10,22;UBERON:0008835,7.17e-10,22;UBERON:0003894,7.17e-10,22;UBERON:0004161,7.17e-10,22;UBERON:0008836,7.17e-10,22;UBERON:0001242,1.17e-09,13;UBERON:0001262,1.17e-09,13;UBERON:0004786,1.17e-09,13;UBERON:0005172,7.65e-09,49;UBERON:0005173,7.65e-09,49;UBERON:0002417,7.65e-09,49;UBERON:0000916,7.65e-09,49;UBERON:0002365,2.67e-08,25;UBERON:0002330,2.67e-08,25;UBERON:0001008,1.90e-07,19;UBERON:0006554,2.00e-07,18;UBERON:0004923,3.13e-07,24;UBERON:0003350,7.21e-07,9;UBERON:0004808,7.21e-07,9;UBERON:0001277,7.21e-07,9;UBERON:0002113,8.98e-07,14;UBERON:0003918,8.98e-07,14;UBERON:0011143,8.98e-07,14;UBERON:0005095,8.98e-07,14;UBERON:0007687,8.98e-07,14|phase1_expression=0,59.3258192986914,49.1399178540699,70.4741612344914,65.6173406229715,34.9188885576731,29.4351927150362,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,18.1142208021779,0,0,30.7185451763341,25.9232487605902,33.8796858827862,46.091533589021,39.8621780468895,39.3348478274694,46.8776041353471,36.5855342581253,0,0,0,20.5084650023405,15.4598220183398,16.9460565697766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3628179011889,18.9293252935905,27.19885334831,45.3350680975766,27.9403859502498,56.4513877742643,18.117330196996,0,0,0,0,0,0,0,1.08245520505607,2.78695852022608,2.02209778005913,43.7324259324,0,0,0.520455980298408,0.913396434936424,1.84492397804847,0.60289056221049,0.23517741427141,0.376999773989026,194.048049671483,0,0,0,0,0,82.0123749359738,0,0,76.6371165625774,0,0,0,0,0,0,0,0,0,0,1.93494791315601,2.48813941220186,10.3616330957807,2.73574412652416,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.374806898238915,1.29351685369508,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,0,105.073172988848,51.8323110660547,2.55945900642281,5.34144345279009,18.2991795077373,42.958590744772,39.360913760542,35.1917408308234,56.9434873853414,42.6570292735188,27.6468729680296,30.8382531663784,32.9489307231313,49.4350674759822,52.5215461195507,62.92864234838,4.55202962287396,8.45438993311993,18.0332377076929,15.6811522440892,21.9166310499417,33.454786087682,39.0169434056667,82.5140727205976,71.9054173513497,79.9613622213267,36.1672205046322,2.00214126859313,3.34150291692445,5.62155280962134,6.8972441272091,7.95884627182976,10.4396599230382,16.686375972147,16.2135226775035,10.4333337011471,10.0637744569148,11.9085103253921,10.9213185590096,22.9846778931872,31.0357525392908,35.7008205808892,5.54259570499814,0.757965647081939,3.096334552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| ||
|EntrezGene=245945 | |||
|HGNC= | |||
|MCL_coexpression_id=297 | |||
|UniProt=Q91WT8,D3Z5E3 | |||
|association_with_transcript=0bp_to_ENSMUST00000113724,ENSMUST00000127275,uc008xok.2_5end | |||
|description=CAGE_peak_2_at_Rbm47_5end | |||
|id=chr5:66472210..66472248,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.15e-07,25;CL:0002563,7.21e-07,9;CL:0002251,7.21e-07,9;CL:0000223,9.16e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.06e-25!130;UBERON:0000925!1.06e-25!130;UBERON:0006595!1.06e-25!130;UBERON:0001007!2.45e-25!128;UBERON:0001555!2.45e-25!128;UBERON:0007026!2.45e-25!128;UBERON:0004921!3.69e-24!126;UBERON:0004185!3.69e-24!126;UBERON:0005409!4.01e-23!59;UBERON:0000160!3.50e-22!43;UBERON:0005177!1.13e-12!85;UBERON:0009569!1.43e-11!66;UBERON:0005172!7.75e-10!49;UBERON:0005173!7.75e-10!49;UBERON:0002417!7.75e-10!49;UBERON:0000916!7.75e-10!49;UBERON:0000344!8.83e-10!15;UBERON:0009854!1.02e-09!23;UBERON:0009856!1.02e-09!23;UBERON:0002107!5.11e-09!22;UBERON:0007499!5.11e-09!22;UBERON:0006925!5.11e-09!22;UBERON:0009497!5.11e-09!22;UBERON:0000015!5.11e-09!22;UBERON:0002423!5.11e-09!22;UBERON:0006235!5.11e-09!22;UBERON:0008835!5.11e-09!22;UBERON:0003894!5.11e-09!22;UBERON:0004161!5.11e-09!22;UBERON:0008836!5.11e-09!22;UBERON:0001242!7.90e-09!13;UBERON:0000060!7.90e-09!13;UBERON:0001262!7.90e-09!13;UBERON:0004786!7.90e-09!13;UBERON:0002100!9.10e-09!98;UBERON:0000077!1.43e-08!97;UBERON:0000466!1.43e-08!79;UBERON:0002365!5.59e-08!25;UBERON:0002330!5.59e-08!25;UBERON:0003104!9.33e-08!131;UBERON:0009142!9.33e-08!131;UBERON:0001041!1.03e-07!92;UBERON:0000481!3.95e-07!230;UBERON:0002108!5.35e-07!16;UBERON:0001008!8.33e-07!17;UBERON:0006554!8.35e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.15e-21,47;UBERON:0000160,1.21e-20,31;UBERON:0004119,1.28e-20,118;UBERON:0000925,1.28e-20,118;UBERON:0006595,1.28e-20,118;UBERON:0001007,2.84e-20,116;UBERON:0001555,2.84e-20,116;UBERON:0007026,2.84e-20,116;UBERON:0004921,3.83e-19,114;UBERON:0005177,9.19e-15,79;UBERON:0002100,1.49e-11,90;UBERON:0000344,1.02e-10,15;UBERON:0009854,1.19e-10,23;UBERON:0009856,1.19e-10,23;UBERON:0009569,2.10e-10,66;UBERON:0002107,7.17e-10,22;UBERON:0007499,7.17e-10,22;UBERON:0006925,7.17e-10,22;UBERON:0009497,7.17e-10,22;UBERON:0000015,7.17e-10,22;UBERON:0002423,7.17e-10,22;UBERON:0006235,7.17e-10,22;UBERON:0008835,7.17e-10,22;UBERON:0003894,7.17e-10,22;UBERON:0004161,7.17e-10,22;UBERON:0008836,7.17e-10,22;UBERON:0001242,1.17e-09,13;UBERON:0001262,1.17e-09,13;UBERON:0004786,1.17e-09,13;UBERON:0005172,7.65e-09,49;UBERON:0005173,7.65e-09,49;UBERON:0002417,7.65e-09,49;UBERON:0000916,7.65e-09,49;UBERON:0002365,2.67e-08,25;UBERON:0002330,2.67e-08,25;UBERON:0001008,1.90e-07,19;UBERON:0006554,2.00e-07,18;UBERON:0004923,3.13e-07,24;UBERON:0003350,7.21e-07,9;UBERON:0004808,7.21e-07,9;UBERON:0001277,7.21e-07,9;UBERON:0002113,8.98e-07,14;UBERON:0003918,8.98e-07,14;UBERON:0011143,8.98e-07,14;UBERON:0005095,8.98e-07,14;UBERON:0007687,8.98e-07,14 | |||
|phase1_expression=0,59.3258192986914,49.1399178540699,70.4741612344914,65.6173406229715,34.9188885576731,29.4351927150362,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,18.1142208021779,0,0,30.7185451763341,25.9232487605902,33.8796858827862,46.091533589021,39.8621780468895,39.3348478274694,46.8776041353471,36.5855342581253,0,0,0,20.5084650023405,15.4598220183398,16.9460565697766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3628179011889,18.9293252935905,27.19885334831,45.3350680975766,27.9403859502498,56.4513877742643,18.117330196996,0,0,0,0,0,0,0,1.08245520505607,2.78695852022608,2.02209778005913,43.7324259324,0,0,0.520455980298408,0.913396434936424,1.84492397804847,0.60289056221049,0.23517741427141,0.376999773989026,194.048049671483,0,0,0,0,0,82.0123749359738,0,0,76.6371165625774,0,0,0,0,0,0,0,0,0,0,1.93494791315601,2.48813941220186,10.3616330957807,2.73574412652416,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.374806898238915,1.29351685369508,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,0,105.073172988848,51.8323110660547,2.55945900642281,5.34144345279009,18.2991795077373,42.958590744772,39.360913760542,35.1917408308234,56.9434873853414,42.6570292735188,27.6468729680296,30.8382531663784,32.9489307231313,49.4350674759822,52.5215461195507,62.92864234838,4.55202962287396,8.45438993311993,18.0332377076929,15.6811522440892,21.9166310499417,33.454786087682,39.0169434056667,82.5140727205976,71.9054173513497,79.9613622213267,36.1672205046322,2.00214126859313,3.34150291692445,5.62155280962134,6.8972441272091,7.95884627182976,10.4396599230382,16.686375972147,16.2135226775035,10.4333337011471,10.0637744569148,11.9085103253921,10.9213185590096,22.9846778931872,31.0357525392908,35.7008205808892,5.54259570499814,0.757965647081939,3.09633455239849,3.39490171550376,1.87752198630802,9.88286918906713,7.61739650835244,13.6593553500459,3.15270288212382,2.87904096543407,1.91345722388985,2.94953966488328,3.7990696010497,3.61622646453779,0,0,0.491764273019036,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.712262414669021,0.488660878060728,4.78413356620353,3.98235415019888,8.49732226542435,13.9068836203785,18.8605079755898,23.9194533233426,14.7568871013085,11.1124166062335,10.9060118843252,5.70395805415554,11.0612865277536,8.4334886859999,6.18813259489121,0,0.18006109403131,0,0,0,0,0,0,3.28540391289194,3.81297727554876,11.467476698858,0.32977250588296,0,0,0,0.164140899745061,53.0495122666328,0,0,2.47664241555867,0,0.188368457004691,0,0,0,0,0,54.4162252268615,4.74503990371703,14.4356821660063,18.1448972580626,14.8452690170273,21.8362563746178,20.9039736896472,29.2593233267689,62.8214260761671,74.1397647229055,0,0,0,0,0,0,0,0.352071715937262,1.3020438484395,0.104859344425711,0,0.864090018773596,0,0,0,0,0.358053391334963,0,0,0.295379054349154,0.302899349844443,0.0762068066549998,0.100826185136841,0.38983152295901,0.0962118416403295,0.116876902181569,0.906921534460845,0,0,0,9.65947970160952,5.63047426353546,14.1026750685794,3.42989406526505,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.682934423016537,3.16038732188782,2.93458427679175,5.51530525350042,4.00044110042907,4.12070114477788,5.13470735346904,4.80124702351215,5.32306529769503,4.71565853465191,6.18033949301224,5.05798703998467,5.57124048869449,4.28664322154766,6.83717523074647,5.59436739344745,2.47251540481984,5.00476328456951,4.11443102862498,6.74408063405482,6.67621331852499,3.19762116591123,3.48204707536723,4.99226186560891,4.57319932181931,3.94604567156764,5.70377278152619,4.48913817326191,5.21994079746366,6.40279135441163,6.54769669071503,6.8172210121825,4.62975866354739,0,6.31615342802603,5.15690529715916,0.956441660344217,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Rbm47 | |||
}} |
Revision as of 07:53, 14 September 2013
Short description: | p2@Rbm47 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rbm47_5end |
Coexpression cluster: | MCL_coexpression_mm9:297 |
Association with transcript: | 0bp_to_ENSMUST00000113724, ENSMUST00000127275, uc008xok.2_5end |
EntrezGene: | Rbm47 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.15e-07 | 25 |
intestinal epithelial cell | 7.21e-07 | 9 |
epithelial cell of alimentary canal | 7.21e-07 | 9 |
endodermal cell | 9.16e-07 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.