FFCP PHASE1:Mm9::chr5:137022705..137022710,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=228|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:137022705..137022710,-|id=chr5:137022705..137022710,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.62e-12,23;UBERON:0000974,1.62e-12,23;UBERON:0004807,1.62e-12,23;UBERON:0005058,1.62e-12,23;UBERON:0003351,1.62e-12,23;UBERON:0009113,1.62e-12,23;UBERON:0003295,1.62e-12,23;UBERON:0009722,1.62e-12,23;UBERON:0005562,1.62e-12,23;UBERON:0007690,1.62e-12,23;UBERON:0004177,3.22e-12,29;UBERON:0005057,3.22e-12,29;UBERON:0006562,5.93e-12,24;UBERON:0003408,5.93e-12,24;UBERON:0001557,5.93e-12,24;UBERON:0001042,5.93e-12,24;UBERON:0008814,5.93e-12,24;UBERON:0009145,5.93e-12,24;UBERON:0000072,1.64e-10,27;UBERON:0000077,6.58e-10,35;UBERON:0000014,5.05e-09,5;UBERON:0001003,5.05e-09,5;UBERON:0002097,5.05e-09,5;UBERON:0002199,5.05e-09,5;UBERON:0007029,5.05e-09,5;UBERON:0007376,5.05e-09,5;UBERON:0002416,5.05e-09,5;UBERON:0007383,5.05e-09,5;UBERON:0007811,1.26e-07,36;UBERON:0002390,2.01e-07,45;UBERON:0003061,2.01e-07,45;UBERON:0002193,7.04e-07,48;UBERON:0002405,7.04e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0.315462165358238,0.274228867211478,0.84877930359606,0.0850432901510698,0.496454756004426,0.522399578277871,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0.523523743973798,0,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0.647067399789637,0,0,0,0.878342391034642,0.83778682725382,0.510914110417183,0.958520996047362,0,0.635351135365324,0.149790639404823,0.915001205637253,0.376963056338593,0,0.255715457330331,0.20778804455956,0,0.101839363850316,0.248813941220186,0,0.210441855886474,0.520481771850815,0,0,0.90422890701429,0.816437989815934,0.896796041993948,0.562210347358373,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0.411564272815887,0.995171334092466,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0.180062061461015,0,0.196764231747404,0.308534225774757,1.16266972375204,0,0,0.493679549740441,0,0.243206428637567,1.16959989940266,0,0,0,0.102904612379284,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0.403367049246685,0.444756087689741,0,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.456994050438915,0,0.814605311381257,0.969762435838129,0.280543279561274,0.252946148497029,0.590440591918409,0.627994911365499,0,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.486405680325106,0,2.87536413054709,0.372140947668503,0,0,0.358794827043824,0.482443521363367,0.369506380333209,0.189491411770485,0,0.848725428875941,0.704070744865506,0.167506257441816,0.476087281772027,0.780534591431195,0.315270288212382,0.8858587585951,0.159454768657487,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0,0.329940245945071,0,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0.42366414172764,0.220528398054962,1.31909002353184,0.322928853391811,0.72375509913787,1.3130957840345,1.80554989719567,0.582961673259701,0,0.341741761595705,0,0.555583582109135,0.941842285023455,1.23024804948923,0.915112692826091,1.35982743995084,1.11961161858926,0,0,0,0,0.216010681643603,0.418176592028937,0.87345025498471,0.539457385539283,0.330613822901344,0.26175594198403,0.648074866458964,0,0,0.448549638131936,0.330916980914195,0.388902376688095,0.258319646955462,0.337912250981556,0.469428954583016,0.5208175393758,0.209718688851422,0.483168241652012,0.576060012515731,0.948033361884535,0.405450430580328,0.513554785824136,0.649604114888975,0.716106782669926,0.198681354781265,2.76449533895928,1.77227432609493,1.51449674922221,1.06689529317,1.71404514732629,2.43644701849381,2.02044867444692,2.68816875017609,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0.750729901804728,0,0,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0.31136204275253,0.798049746802062,0.341467211508268,0.486213434136588,0,0,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.3745660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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=228 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:137022705..137022710,- | |||
|id=chr5:137022705..137022710,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.62e-12,23;UBERON:0000974,1.62e-12,23;UBERON:0004807,1.62e-12,23;UBERON:0005058,1.62e-12,23;UBERON:0003351,1.62e-12,23;UBERON:0009113,1.62e-12,23;UBERON:0003295,1.62e-12,23;UBERON:0009722,1.62e-12,23;UBERON:0005562,1.62e-12,23;UBERON:0007690,1.62e-12,23;UBERON:0004177,3.22e-12,29;UBERON:0005057,3.22e-12,29;UBERON:0006562,5.93e-12,24;UBERON:0003408,5.93e-12,24;UBERON:0001557,5.93e-12,24;UBERON:0001042,5.93e-12,24;UBERON:0008814,5.93e-12,24;UBERON:0009145,5.93e-12,24;UBERON:0000072,1.64e-10,27;UBERON:0000077,6.58e-10,35;UBERON:0000014,5.05e-09,5;UBERON:0001003,5.05e-09,5;UBERON:0002097,5.05e-09,5;UBERON:0002199,5.05e-09,5;UBERON:0007029,5.05e-09,5;UBERON:0007376,5.05e-09,5;UBERON:0002416,5.05e-09,5;UBERON:0007383,5.05e-09,5;UBERON:0007811,1.26e-07,36;UBERON:0002390,2.01e-07,45;UBERON:0003061,2.01e-07,45;UBERON:0002193,7.04e-07,48;UBERON:0002405,7.04e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0.315462165358238,0.274228867211478,0.84877930359606,0.0850432901510698,0.496454756004426,0.522399578277871,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0.523523743973798,0,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0.647067399789637,0,0,0,0.878342391034642,0.83778682725382,0.510914110417183,0.958520996047362,0,0.635351135365324,0.149790639404823,0.915001205637253,0.376963056338593,0,0.255715457330331,0.20778804455956,0,0.101839363850316,0.248813941220186,0,0.210441855886474,0.520481771850815,0,0,0.90422890701429,0.816437989815934,0.896796041993948,0.562210347358373,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0.411564272815887,0.995171334092466,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0.180062061461015,0,0.196764231747404,0.308534225774757,1.16266972375204,0,0,0.493679549740441,0,0.243206428637567,1.16959989940266,0,0,0,0.102904612379284,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0.403367049246685,0.444756087689741,0,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.456994050438915,0,0.814605311381257,0.969762435838129,0.280543279561274,0.252946148497029,0.590440591918409,0.627994911365499,0,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.486405680325106,0,2.87536413054709,0.372140947668503,0,0,0.358794827043824,0.482443521363367,0.369506380333209,0.189491411770485,0,0.848725428875941,0.704070744865506,0.167506257441816,0.476087281772027,0.780534591431195,0.315270288212382,0.8858587585951,0.159454768657487,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0,0.329940245945071,0,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0.42366414172764,0.220528398054962,1.31909002353184,0.322928853391811,0.72375509913787,1.3130957840345,1.80554989719567,0.582961673259701,0,0.341741761595705,0,0.555583582109135,0.941842285023455,1.23024804948923,0.915112692826091,1.35982743995084,1.11961161858926,0,0,0,0,0.216010681643603,0.418176592028937,0.87345025498471,0.539457385539283,0.330613822901344,0.26175594198403,0.648074866458964,0,0,0.448549638131936,0.330916980914195,0.388902376688095,0.258319646955462,0.337912250981556,0.469428954583016,0.5208175393758,0.209718688851422,0.483168241652012,0.576060012515731,0.948033361884535,0.405450430580328,0.513554785824136,0.649604114888975,0.716106782669926,0.198681354781265,2.76449533895928,1.77227432609493,1.51449674922221,1.06689529317,1.71404514732629,2.43644701849381,2.02044867444692,2.68816875017609,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0.750729901804728,0,0,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0.31136204275253,0.798049746802062,0.341467211508268,0.486213434136588,0,0,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.114870937911227,0.476293691283074,0,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.887379030796687,0,0.145346416632329,0.470546902076653,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.619747364743864,0,0,0.467863216890817,0,0,0.441182838239031,0 | |||
|short_description=p@chr5:137022705..137022710,- | |||
}} |
Revision as of 06:42, 14 September 2013
Short description: | p@chr5:137022705..137022710, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:137022705..137022710, - |
Coexpression cluster: | MCL_coexpression_mm9:228 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.62e-12 | 23 |
neck | 1.62e-12 | 23 |
respiratory system epithelium | 1.62e-12 | 23 |
hemolymphoid system gland | 1.62e-12 | 23 |
pharyngeal epithelium | 1.62e-12 | 23 |
thymic region | 1.62e-12 | 23 |
pharyngeal gland | 1.62e-12 | 23 |
entire pharyngeal arch endoderm | 1.62e-12 | 23 |
thymus primordium | 1.62e-12 | 23 |
early pharyngeal endoderm | 1.62e-12 | 23 |
hemopoietic organ | 3.22e-12 | 29 |
immune organ | 3.22e-12 | 29 |
pharynx | 5.93e-12 | 24 |
gland of gut | 5.93e-12 | 24 |
upper respiratory tract | 5.93e-12 | 24 |
chordate pharynx | 5.93e-12 | 24 |
pharyngeal arch system | 5.93e-12 | 24 |
pharyngeal region of foregut | 5.93e-12 | 24 |
segment of respiratory tract | 1.64e-10 | 27 |
mixed endoderm/mesoderm-derived structure | 6.58e-10 | 35 |
zone of skin | 5.05e-09 | 5 |
skin epidermis | 5.05e-09 | 5 |
skin of body | 5.05e-09 | 5 |
integument | 5.05e-09 | 5 |
surface | 5.05e-09 | 5 |
outer epithelium | 5.05e-09 | 5 |
integumental system | 5.05e-09 | 5 |
enveloping layer of ectoderm | 5.05e-09 | 5 |
craniocervical region | 1.26e-07 | 36 |
hematopoietic system | 2.01e-07 | 45 |
blood island | 2.01e-07 | 45 |
hemolymphoid system | 7.04e-07 | 48 |
immune system | 7.04e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.