FFCP PHASE1:Mm9::chr4:150302128..150302144,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21942|HGNC=|MCL_coexpression_id=68|UniProt=P20334,Q3U3R1|association_with_transcript=20bp_to_ENSMUST00000116257,ENSMUST00000146133,NM_001077509,uc008vyc.1_5end|description=CAGE_peak_1_at_Tnfrsf9_5end|id=chr4:150302128..150302144,+|ontology_enrichment_celltype=CL:0000084!3.30e-09!11;CL:0000827!3.30e-09!11;CL:0000838!7.38e-09!12;CL:0000791!8.44e-08!9;CL:0000789!8.44e-08!9;CL:0002420!8.44e-08!9;CL:0002419!8.44e-08!9;CL:0000790!8.44e-08!9;CL:0000542!1.27e-07!13;CL:0000051!1.27e-07!13;CL:0000624!4.04e-07!8|ontology_enrichment_celltype_v019_2=CL:0000084,6.48e-14,11;CL:0000827,6.48e-14,11;CL:0000838,2.01e-12,12;CL:0000791,1.21e-11,9;CL:0000789,1.21e-11,9;CL:0002420,1.21e-11,9;CL:0002419,1.21e-11,9;CL:0000790,1.21e-11,9;CL:0000542,3.64e-11,13;CL:0000051,3.64e-11,13;CL:0000624,1.50e-10,8;CL:0000893,3.07e-08,6;CL:0002489,3.07e-08,6;CL:0000898,3.07e-08,6;CL:0000809,3.07e-08,6;CL:0000810,3.07e-08,6;CL:0000895,3.07e-08,6;CL:0000808,3.07e-08,6;CL:0000894,3.07e-08,6;CL:0000806,3.07e-08,6;CL:0000807,3.07e-08,6;CL:0000805,3.07e-08,6;CL:0002425,3.07e-08,6;CL:0002436,3.07e-08,6;CL:0002427,3.07e-08,6;CL:0002428,3.07e-08,6;CL:0002429,3.07e-08,6;CL:0002433,3.07e-08,6;CL:0002431,3.07e-08,6;CL:0002432,3.07e-08,6;CL:0002031,7.20e-08,25;CL:0000738,1.16e-07,17;CL:0002087,1.16e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.28e-15!48;UBERON:0004177!4.76e-14!29;UBERON:0002390!1.34e-13!45;UBERON:0003061!1.34e-13!45;UBERON:0003408!4.03e-12!24;UBERON:0002370!1.08e-11!23;UBERON:0000974!1.08e-11!23;UBERON:0004807!1.08e-11!23;UBERON:0005058!1.08e-11!23;UBERON:0003351!1.08e-11!23;UBERON:0009113!1.08e-11!23;UBERON:0003295!1.08e-11!23;UBERON:0009722!1.08e-11!23;UBERON:0005562!1.08e-11!23;UBERON:0007690!1.08e-11!23;UBERON:0006562!2.32e-11!24;UBERON:0001557!2.32e-11!24;UBERON:0001042!2.32e-11!24;UBERON:0008814!2.32e-11!24;UBERON:0009145!2.32e-11!24;UBERON:0002405!8.17e-11!70;UBERON:0000072!8.39e-11!27;UBERON:0001004!4.16e-10!42;UBERON:0000065!1.05e-09!41;UBERON:0003081!1.20e-09!88;UBERON:0005057!2.15e-08!51;UBERON:0004119!3.47e-08!130;UBERON:0000925!3.47e-08!130;UBERON:0006595!3.47e-08!130;UBERON:0001007!2.22e-07!128;UBERON:0001555!2.22e-07!128;UBERON:0007026!2.22e-07!128;UBERON:0000077!2.26e-07!97;UBERON:0000063!4.76e-07!35;UBERON:0004921!9.04e-07!126;UBERON:0004185!9.04e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.09e-21,29;UBERON:0005057,1.09e-21,29;UBERON:0000077,1.91e-21,35;UBERON:0002193,1.86e-20,48;UBERON:0002405,1.86e-20,48;UBERON:0003408,6.79e-20,24;UBERON:0002370,3.34e-19,23;UBERON:0000974,3.34e-19,23;UBERON:0004807,3.34e-19,23;UBERON:0005058,3.34e-19,23;UBERON:0003351,3.34e-19,23;UBERON:0009113,3.34e-19,23;UBERON:0003295,3.34e-19,23;UBERON:0009722,3.34e-19,23;UBERON:0005562,3.34e-19,23;UBERON:0007690,3.34e-19,23;UBERON:0006562,4.46e-18,24;UBERON:0001557,4.46e-18,24;UBERON:0001042,4.46e-18,24;UBERON:0008814,4.46e-18,24;UBERON:0009145,4.46e-18,24;UBERON:0002390,5.74e-18,45;UBERON:0003061,5.74e-18,45;UBERON:0000072,3.25e-15,27;UBERON:0001004,8.78e-15,42;UBERON:0000065,3.87e-14,41;UBERON:0003081,4.66e-12,87;UBERON:0007811,1.13e-10,36;UBERON:0004119,1.32e-09,118;UBERON:0000925,1.32e-09,118;UBERON:0006595,1.32e-09,118;UBERON:0000153,1.75e-09,43;UBERON:0001041,9.96e-09,80;UBERON:0005911,1.25e-08,69;UBERON:0001007,1.87e-08,116;UBERON:0001555,1.87e-08,116;UBERON:0007026,1.87e-08,116;UBERON:0000926,4.35e-08,120;UBERON:0004120,4.35e-08,120;UBERON:0006603,4.35e-08,120;UBERON:0003929,9.55e-08,55;UBERON:0004921,1.35e-07,114|phase1_expression=0,3.48975407639361,3.18499467572675,0,0,0.503637815735669,0.934450562382103,209.954523916003,164.72280491745,165.249555583327,820.47650373662,444.490469922014,15.2368649638773,12.1514359362406,0.999329285446988,3.23960427823721,0,4.41647031501533,4.66189074259512,1.69755860719212,0.510259740906419,50.6383851124515,87.7631291506823,3.19984845586813,3.67054849707472,5.7423196411502,3.01533397311352,2.15471232685889,0.190023419456374,1.26015064879965,1.77384408524244,0,0,0,0,0,0,0,0,0.523523743973798,0.588231488031014,0,0,0.377690453926732,0.709638518536602,2.0190142737785,0,0,0,0,0,0,0.335565212115473,50.7753499407941,20.1656279485478,0.257259436035947,0.573066879877513,0,0,0,0,0,0,4.04954872776629,0.988866362566974,3.5524005747305,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,5.14938114665652,0.0755715601067855,0.869593466105033,0,0.679971333707751,0,0,0,0.842666520790511,0.511290967734173,0.259786004602869,0,0,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.59857431606684,27.4474156666002,0.742210695324124,0.173485326766136,0.304465478312141,0,0.301445281105245,0.587943535678524,0,18.539622580078,0.433798070759735,0,4.52947179852746,2.42925670306433,2.42437626567611,0,0,0,2.04365644166873,3.35482348616577,0,0.762421362438388,0.149790639404823,0,0,0,0,0,0,0.101839363850316,3.4833951770826,0.505445516867349,0,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0,0,0,0,0,0.219195732427575,0,1.0447564995665,5.14455341019859,0.398068533636986,0,0.257347907114715,0.568326998791185,0,0.938104239924385,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,0,4.29544417878937,0.528901133327089,0,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0.474529061544512,0.494096864172033,1.25667604400135,0,0.38992817423824,1.79763881730844,1.29682829924817,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0.486405680325106,0.823684239564244,1.43768206527355,2.60498663367952,1.5601883655728,0.757736633841335,0.179397413521912,1.4473305640901,4.24932337383191,0,0.162964976442026,0,0,0,0.238043640886014,0.390267295715598,1.10344600874334,1.10732344824387,1.59454768657487,1.63863314715738,2.41758974612254,2.16973587872267,0,0.54390568381871,1.47529281905711,1.37968373152366,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,13.0584878391607,0.534196811001766,0,1.48473110675282,0,0,0.604647113929502,0,0.295301892880773,0.922305443831782,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0.329098041204242,0.304464949114599,16.6616912725234,103.797714723272,0,0.98931751764888,0,0.241251699712623,0.596861720015682,0.164140899745061,0.291480836629851,0,3.07567585436135,0.82554747185289,3.51869602002452,2.26042148405629,3.14396723758358,4.11800711771741,9.00885678967433,6.43776680688827,4.97519905695926,0.954670618015114,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.41326727862668,0,0.388844919875379,3.10669656543463,0,0,0,0,0,0.337912250981556,0.117357238645754,0.2604087696879,0,0,0,17.3806116345498,18.6507198066951,11.0927833738013,5.06691209613401,2.50637373934474,5.56307793387542,12.2599358510368,11.8151621739662,10.6014772445555,8.23033511873998,11.2925327353261,19.9788655516492,13.1810223047251,17.7652891315985,0.226730383615211,0,0,0,0.386379188064381,17.4544702169599,2.01466786693992,1.71494703263253,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.367687016900028,0,0.206035057238894,0.64183841918363,0.252697211763798,0,0.188626341386076,0.37456602987953,0.384150914429216,0.229741875822453,0,0.231768651889711,0.192909220463705,0.824171801606613,0.441596760403192,0,0.177475806159338,0.715308569841963,0.290692833264657,0.282328141245992,0.338458431566706,1.09756783723664,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0.964533054905707,1.24905288968973,1.63752125911786,1.93383948643468,1.3390183244819,1.76473135295612,2.08681052058379|short_description=p1@Tnfrsf9}} | ||
|EntrezGene=21942 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|UniProt=P20334,Q3U3R1 | |||
|association_with_transcript=20bp_to_ENSMUST00000116257,ENSMUST00000146133,NM_001077509,uc008vyc.1_5end | |||
|description=CAGE_peak_1_at_Tnfrsf9_5end | |||
|id=chr4:150302128..150302144,+ | |||
|ontology_enrichment_celltype=CL:0000084!3.30e-09!11;CL:0000827!3.30e-09!11;CL:0000838!7.38e-09!12;CL:0000791!8.44e-08!9;CL:0000789!8.44e-08!9;CL:0002420!8.44e-08!9;CL:0002419!8.44e-08!9;CL:0000790!8.44e-08!9;CL:0000542!1.27e-07!13;CL:0000051!1.27e-07!13;CL:0000624!4.04e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.48e-14,11;CL:0000827,6.48e-14,11;CL:0000838,2.01e-12,12;CL:0000791,1.21e-11,9;CL:0000789,1.21e-11,9;CL:0002420,1.21e-11,9;CL:0002419,1.21e-11,9;CL:0000790,1.21e-11,9;CL:0000542,3.64e-11,13;CL:0000051,3.64e-11,13;CL:0000624,1.50e-10,8;CL:0000893,3.07e-08,6;CL:0002489,3.07e-08,6;CL:0000898,3.07e-08,6;CL:0000809,3.07e-08,6;CL:0000810,3.07e-08,6;CL:0000895,3.07e-08,6;CL:0000808,3.07e-08,6;CL:0000894,3.07e-08,6;CL:0000806,3.07e-08,6;CL:0000807,3.07e-08,6;CL:0000805,3.07e-08,6;CL:0002425,3.07e-08,6;CL:0002436,3.07e-08,6;CL:0002427,3.07e-08,6;CL:0002428,3.07e-08,6;CL:0002429,3.07e-08,6;CL:0002433,3.07e-08,6;CL:0002431,3.07e-08,6;CL:0002432,3.07e-08,6;CL:0002031,7.20e-08,25;CL:0000738,1.16e-07,17;CL:0002087,1.16e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.28e-15!48;UBERON:0004177!4.76e-14!29;UBERON:0002390!1.34e-13!45;UBERON:0003061!1.34e-13!45;UBERON:0003408!4.03e-12!24;UBERON:0002370!1.08e-11!23;UBERON:0000974!1.08e-11!23;UBERON:0004807!1.08e-11!23;UBERON:0005058!1.08e-11!23;UBERON:0003351!1.08e-11!23;UBERON:0009113!1.08e-11!23;UBERON:0003295!1.08e-11!23;UBERON:0009722!1.08e-11!23;UBERON:0005562!1.08e-11!23;UBERON:0007690!1.08e-11!23;UBERON:0006562!2.32e-11!24;UBERON:0001557!2.32e-11!24;UBERON:0001042!2.32e-11!24;UBERON:0008814!2.32e-11!24;UBERON:0009145!2.32e-11!24;UBERON:0002405!8.17e-11!70;UBERON:0000072!8.39e-11!27;UBERON:0001004!4.16e-10!42;UBERON:0000065!1.05e-09!41;UBERON:0003081!1.20e-09!88;UBERON:0005057!2.15e-08!51;UBERON:0004119!3.47e-08!130;UBERON:0000925!3.47e-08!130;UBERON:0006595!3.47e-08!130;UBERON:0001007!2.22e-07!128;UBERON:0001555!2.22e-07!128;UBERON:0007026!2.22e-07!128;UBERON:0000077!2.26e-07!97;UBERON:0000063!4.76e-07!35;UBERON:0004921!9.04e-07!126;UBERON:0004185!9.04e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.09e-21,29;UBERON:0005057,1.09e-21,29;UBERON:0000077,1.91e-21,35;UBERON:0002193,1.86e-20,48;UBERON:0002405,1.86e-20,48;UBERON:0003408,6.79e-20,24;UBERON:0002370,3.34e-19,23;UBERON:0000974,3.34e-19,23;UBERON:0004807,3.34e-19,23;UBERON:0005058,3.34e-19,23;UBERON:0003351,3.34e-19,23;UBERON:0009113,3.34e-19,23;UBERON:0003295,3.34e-19,23;UBERON:0009722,3.34e-19,23;UBERON:0005562,3.34e-19,23;UBERON:0007690,3.34e-19,23;UBERON:0006562,4.46e-18,24;UBERON:0001557,4.46e-18,24;UBERON:0001042,4.46e-18,24;UBERON:0008814,4.46e-18,24;UBERON:0009145,4.46e-18,24;UBERON:0002390,5.74e-18,45;UBERON:0003061,5.74e-18,45;UBERON:0000072,3.25e-15,27;UBERON:0001004,8.78e-15,42;UBERON:0000065,3.87e-14,41;UBERON:0003081,4.66e-12,87;UBERON:0007811,1.13e-10,36;UBERON:0004119,1.32e-09,118;UBERON:0000925,1.32e-09,118;UBERON:0006595,1.32e-09,118;UBERON:0000153,1.75e-09,43;UBERON:0001041,9.96e-09,80;UBERON:0005911,1.25e-08,69;UBERON:0001007,1.87e-08,116;UBERON:0001555,1.87e-08,116;UBERON:0007026,1.87e-08,116;UBERON:0000926,4.35e-08,120;UBERON:0004120,4.35e-08,120;UBERON:0006603,4.35e-08,120;UBERON:0003929,9.55e-08,55;UBERON:0004921,1.35e-07,114 | |||
|phase1_expression=0,3.48975407639361,3.18499467572675,0,0,0.503637815735669,0.934450562382103,209.954523916003,164.72280491745,165.249555583327,820.47650373662,444.490469922014,15.2368649638773,12.1514359362406,0.999329285446988,3.23960427823721,0,4.41647031501533,4.66189074259512,1.69755860719212,0.510259740906419,50.6383851124515,87.7631291506823,3.19984845586813,3.67054849707472,5.7423196411502,3.01533397311352,2.15471232685889,0.190023419456374,1.26015064879965,1.77384408524244,0,0,0,0,0,0,0,0,0.523523743973798,0.588231488031014,0,0,0.377690453926732,0.709638518536602,2.0190142737785,0,0,0,0,0,0,0.335565212115473,50.7753499407941,20.1656279485478,0.257259436035947,0.573066879877513,0,0,0,0,0,0,4.04954872776629,0.988866362566974,3.5524005747305,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,5.14938114665652,0.0755715601067855,0.869593466105033,0,0.679971333707751,0,0,0,0.842666520790511,0.511290967734173,0.259786004602869,0,0,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.59857431606684,27.4474156666002,0.742210695324124,0.173485326766136,0.304465478312141,0,0.301445281105245,0.587943535678524,0,18.539622580078,0.433798070759735,0,4.52947179852746,2.42925670306433,2.42437626567611,0,0,0,2.04365644166873,3.35482348616577,0,0.762421362438388,0.149790639404823,0,0,0,0,0,0,0.101839363850316,3.4833951770826,0.505445516867349,0,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0,0,0,0,0,0.219195732427575,0,1.0447564995665,5.14455341019859,0.398068533636986,0,0.257347907114715,0.568326998791185,0,0.938104239924385,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,0,4.29544417878937,0.528901133327089,0,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0.474529061544512,0.494096864172033,1.25667604400135,0,0.38992817423824,1.79763881730844,1.29682829924817,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0.486405680325106,0.823684239564244,1.43768206527355,2.60498663367952,1.5601883655728,0.757736633841335,0.179397413521912,1.4473305640901,4.24932337383191,0,0.162964976442026,0,0,0,0.238043640886014,0.390267295715598,1.10344600874334,1.10732344824387,1.59454768657487,1.63863314715738,2.41758974612254,2.16973587872267,0,0.54390568381871,1.47529281905711,1.37968373152366,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,13.0584878391607,0.534196811001766,0,1.48473110675282,0,0,0.604647113929502,0,0.295301892880773,0.922305443831782,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0.329098041204242,0.304464949114599,16.6616912725234,103.797714723272,0,0.98931751764888,0,0.241251699712623,0.596861720015682,0.164140899745061,0.291480836629851,0,3.07567585436135,0.82554747185289,3.51869602002452,2.26042148405629,3.14396723758358,4.11800711771741,9.00885678967433,6.43776680688827,4.97519905695926,0.954670618015114,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.41326727862668,0,0.388844919875379,3.10669656543463,0,0,0,0,0,0.337912250981556,0.117357238645754,0.2604087696879,0,0,0,17.3806116345498,18.6507198066951,11.0927833738013,5.06691209613401,2.50637373934474,5.56307793387542,12.2599358510368,11.8151621739662,10.6014772445555,8.23033511873998,11.2925327353261,19.9788655516492,13.1810223047251,17.7652891315985,0.226730383615211,0,0,0,0.386379188064381,17.4544702169599,2.01466786693992,1.71494703263253,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.367687016900028,0,0.206035057238894,0.64183841918363,0.252697211763798,0,0.188626341386076,0.37456602987953,0.384150914429216,0.229741875822453,0,0.231768651889711,0.192909220463705,0.824171801606613,0.441596760403192,0,0.177475806159338,0.715308569841963,0.290692833264657,0.282328141245992,0.338458431566706,1.09756783723664,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0.964533054905707,1.24905288968973,1.63752125911786,1.93383948643468,1.3390183244819,1.76473135295612,2.08681052058379 | |||
|short_description=p1@Tnfrsf9 | |||
}} |
Revision as of 04:32, 14 September 2013
Short description: | p1@Tnfrsf9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tnfrsf9_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | 20bp_to_ENSMUST00000116257, ENSMUST00000146133, NM_001077509, uc008vyc.1_5end |
EntrezGene: | Tnfrsf9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.