FFCP PHASE1:Mm9::chr3:95021853..95021911,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=213054|HGNC=|MCL_coexpression_id=411|UniProt=P81069,Q8C2T8|association_with_transcript=0bp_to_ENSMUST00000098873,NM_029885,NM_172512,uc008qin.1,uc008qio.1,uc008qip.1,uc008qiq.1,uc008qir.1_5end|description=CAGE_peak_1_at_Gabpb2_5end|id=chr3:95021853..95021911,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!9.01e-17!130;UBERON:0000925!9.01e-17!130;UBERON:0006595!9.01e-17!130;UBERON:0001007!2.35e-16!128;UBERON:0001555!2.35e-16!128;UBERON:0007026!2.35e-16!128;UBERON:0003104!3.54e-16!131;UBERON:0009142!3.54e-16!131;UBERON:0004921!4.89e-16!126;UBERON:0004185!4.89e-16!126;UBERON:0000077!4.43e-15!97;UBERON:0005057!1.79e-14!51;UBERON:0005911!1.18e-13!69;UBERON:0001041!1.31e-13!92;UBERON:0000926!1.96e-13!193;UBERON:0004120!1.96e-13!193;UBERON:0006603!1.96e-13!193;UBERON:0002405!3.41e-13!70;UBERON:0003929!3.45e-11!55;UBERON:0009569!3.50e-11!66;UBERON:0005172!1.01e-10!49;UBERON:0005173!1.01e-10!49;UBERON:0002417!1.01e-10!49;UBERON:0000916!1.01e-10!49;UBERON:0002530!2.16e-10!65;UBERON:0002365!8.18e-10!25;UBERON:0002330!8.18e-10!25;UBERON:0001048!1.61e-09!147;UBERON:0000490!2.07e-09!66;UBERON:0009854!1.03e-08!23;UBERON:0009856!1.03e-08!23;UBERON:0002107!1.37e-08!22;UBERON:0007499!1.37e-08!22;UBERON:0006925!1.37e-08!22;UBERON:0009497!1.37e-08!22;UBERON:0000015!1.37e-08!22;UBERON:0002423!1.37e-08!22;UBERON:0006235!1.37e-08!22;UBERON:0008835!1.37e-08!22;UBERON:0003894!1.37e-08!22;UBERON:0004161!1.37e-08!22;UBERON:0008836!1.37e-08!22;UBERON:0002368!1.85e-08!60;UBERON:0000949!2.23e-07!72;UBERON:0000466!2.31e-07!79;UBERON:0005177!4.10e-07!85;UBERON:0000481!4.13e-07!230;UBERON:0005256!5.29e-07!47;UBERON:0002100!6.13e-07!98;UBERON:0004177!6.29e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.23e-18,118;UBERON:0000925,8.23e-18,118;UBERON:0006595,8.23e-18,118;UBERON:0001007,2.12e-17,116;UBERON:0001555,2.12e-17,116;UBERON:0007026,2.12e-17,116;UBERON:0004921,4.30e-17,114;UBERON:0001041,4.12e-15,80;UBERON:0005911,1.12e-13,69;UBERON:0003929,3.25e-11,55;UBERON:0009569,3.49e-11,66;UBERON:0005172,1.01e-10,49;UBERON:0005173,1.01e-10,49;UBERON:0002417,1.01e-10,49;UBERON:0000916,1.01e-10,49;UBERON:0002530,2.05e-10,65;UBERON:0002100,2.18e-10,90;UBERON:0005177,4.58e-10,79;UBERON:0002365,8.16e-10,25;UBERON:0002330,8.16e-10,25;UBERON:0001048,1.60e-09,134;UBERON:0000490,1.97e-09,66;UBERON:0009854,1.03e-08,23;UBERON:0009856,1.03e-08,23;UBERON:0002107,1.37e-08,22;UBERON:0007499,1.37e-08,22;UBERON:0006925,1.37e-08,22;UBERON:0009497,1.37e-08,22;UBERON:0000015,1.37e-08,22;UBERON:0002423,1.37e-08,22;UBERON:0006235,1.37e-08,22;UBERON:0008835,1.37e-08,22;UBERON:0003894,1.37e-08,22;UBERON:0004161,1.37e-08,22;UBERON:0008836,1.37e-08,22;UBERON:0000077,1.38e-08,35;UBERON:0002368,1.76e-08,60;UBERON:0003104,2.22e-08,61;UBERON:0009142,2.22e-08,61;UBERON:0005256,6.28e-08,45;UBERON:0000949,2.14e-07,72;UBERON:0004177,5.93e-07,29;UBERON:0005057,5.93e-07,29|phase1_expression=4.48416771893423,5.58360652222978,7.27998783023258,14.215817931421,10.5188103288733,5.37213670118047,6.54115393667472,9.42600261123507,3.51971805379167,3.5109678948299,5.13653904676515,6.94017783259427,14.5520620441525,12.5011175459166,10.6595123781012,12.3509913107794,13.9912375625629,13.8803352757625,18.2362196695633,11.4585205985468,5.18764069921526,6.35462087685666,4.70159620450084,10.3995074815714,6.65286915094793,7.46501553349526,6.03066794622705,5.38678081714723,8.7410772949932,7.30887376303799,5.54326276638262,3.81018404075779,6.76571266343027,0,6.06588401477677,3.65716219788683,7.35009682544529,15.0671387065287,17.9707129240474,17.2762835511353,13.5293242247133,12.294818729252,10.6812277666854,5.16176953699867,5.37297735463427,3.12029478674859,0.782391344348039,0.218025156380447,0.439372365468944,2.3331587888914,2.51975558925653,0,11.4092172119261,9.42970784614748,16.4685961579807,6.17422646486273,3.43840127926508,3.09403255366465,1.21389876515759,0.528990979272033,0.633831403506179,1.69422266034566,0.889294796111139,0.899899717281399,0,0.7104801149461,0,0.384218305321555,2.17748185847803,1.08004750665353,1.26194976810829,0.856952953211411,0.441737081903227,1.46988959057945,2.20444583341944,0,5.50579404996943,1.91531007127782,2.30409799884365,0.791317726381163,1.09785172322892,0.52091337055676,1.11673199600552,1.12552522006336,2.75036845998258,1.17851434189467,1.99320353118744,1.1183966749518,2.27178579999552,3.6274348851257,13.0439019915755,9.46466264679525,4.75979933595425,7.55584468292944,12.9955283489534,13.8888335000174,7.5839986871146,2.55645483867087,3.63700406444016,2.82671659608272,2.67602497575693,7.69958864485907,2.54805239706646,0,4.11332977921307,1.01343946190039,2.52762222507392,9.7056297761201,19.6792791571851,11.875371125186,2.94925055502431,3.65358573974569,5.99600292865752,5.87818298155228,10.347806227942,7.6656620711102,5.19109432242185,9.9773556274739,10.6153266233985,6.79420769779119,12.5879665522424,15.516008100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| ||
|EntrezGene=213054 | |||
|HGNC= | |||
|MCL_coexpression_id=411 | |||
|UniProt=P81069,Q8C2T8 | |||
|association_with_transcript=0bp_to_ENSMUST00000098873,NM_029885,NM_172512,uc008qin.1,uc008qio.1,uc008qip.1,uc008qiq.1,uc008qir.1_5end | |||
|description=CAGE_peak_1_at_Gabpb2_5end | |||
|id=chr3:95021853..95021911,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!9.01e-17!130;UBERON:0000925!9.01e-17!130;UBERON:0006595!9.01e-17!130;UBERON:0001007!2.35e-16!128;UBERON:0001555!2.35e-16!128;UBERON:0007026!2.35e-16!128;UBERON:0003104!3.54e-16!131;UBERON:0009142!3.54e-16!131;UBERON:0004921!4.89e-16!126;UBERON:0004185!4.89e-16!126;UBERON:0000077!4.43e-15!97;UBERON:0005057!1.79e-14!51;UBERON:0005911!1.18e-13!69;UBERON:0001041!1.31e-13!92;UBERON:0000926!1.96e-13!193;UBERON:0004120!1.96e-13!193;UBERON:0006603!1.96e-13!193;UBERON:0002405!3.41e-13!70;UBERON:0003929!3.45e-11!55;UBERON:0009569!3.50e-11!66;UBERON:0005172!1.01e-10!49;UBERON:0005173!1.01e-10!49;UBERON:0002417!1.01e-10!49;UBERON:0000916!1.01e-10!49;UBERON:0002530!2.16e-10!65;UBERON:0002365!8.18e-10!25;UBERON:0002330!8.18e-10!25;UBERON:0001048!1.61e-09!147;UBERON:0000490!2.07e-09!66;UBERON:0009854!1.03e-08!23;UBERON:0009856!1.03e-08!23;UBERON:0002107!1.37e-08!22;UBERON:0007499!1.37e-08!22;UBERON:0006925!1.37e-08!22;UBERON:0009497!1.37e-08!22;UBERON:0000015!1.37e-08!22;UBERON:0002423!1.37e-08!22;UBERON:0006235!1.37e-08!22;UBERON:0008835!1.37e-08!22;UBERON:0003894!1.37e-08!22;UBERON:0004161!1.37e-08!22;UBERON:0008836!1.37e-08!22;UBERON:0002368!1.85e-08!60;UBERON:0000949!2.23e-07!72;UBERON:0000466!2.31e-07!79;UBERON:0005177!4.10e-07!85;UBERON:0000481!4.13e-07!230;UBERON:0005256!5.29e-07!47;UBERON:0002100!6.13e-07!98;UBERON:0004177!6.29e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.23e-18,118;UBERON:0000925,8.23e-18,118;UBERON:0006595,8.23e-18,118;UBERON:0001007,2.12e-17,116;UBERON:0001555,2.12e-17,116;UBERON:0007026,2.12e-17,116;UBERON:0004921,4.30e-17,114;UBERON:0001041,4.12e-15,80;UBERON:0005911,1.12e-13,69;UBERON:0003929,3.25e-11,55;UBERON:0009569,3.49e-11,66;UBERON:0005172,1.01e-10,49;UBERON:0005173,1.01e-10,49;UBERON:0002417,1.01e-10,49;UBERON:0000916,1.01e-10,49;UBERON:0002530,2.05e-10,65;UBERON:0002100,2.18e-10,90;UBERON:0005177,4.58e-10,79;UBERON:0002365,8.16e-10,25;UBERON:0002330,8.16e-10,25;UBERON:0001048,1.60e-09,134;UBERON:0000490,1.97e-09,66;UBERON:0009854,1.03e-08,23;UBERON:0009856,1.03e-08,23;UBERON:0002107,1.37e-08,22;UBERON:0007499,1.37e-08,22;UBERON:0006925,1.37e-08,22;UBERON:0009497,1.37e-08,22;UBERON:0000015,1.37e-08,22;UBERON:0002423,1.37e-08,22;UBERON:0006235,1.37e-08,22;UBERON:0008835,1.37e-08,22;UBERON:0003894,1.37e-08,22;UBERON:0004161,1.37e-08,22;UBERON:0008836,1.37e-08,22;UBERON:0000077,1.38e-08,35;UBERON:0002368,1.76e-08,60;UBERON:0003104,2.22e-08,61;UBERON:0009142,2.22e-08,61;UBERON:0005256,6.28e-08,45;UBERON:0000949,2.14e-07,72;UBERON:0004177,5.93e-07,29;UBERON:0005057,5.93e-07,29 | |||
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| |||
|short_description=p1@Gabpb2 | |||
}} |
Revision as of 03:03, 14 September 2013
Short description: | p1@Gabpb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gabpb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:411 |
Association with transcript: | 0bp_to_ENSMUST00000098873, NM_029885, NM_172512, uc008qin.1, uc008qio.1, uc008qip.1, uc008qiq.1, uc008qir.1_5end |
EntrezGene: | Gabpb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.