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FFCP PHASE1:Mm9::chr2:51790463..51790535,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=71684|HGNC=|MCL_coexpression_id=1384|UniProt=Q99J64,A2AU66|association_with_transcript=0bp_to_ENSMUST00000039138,ENSMUST00000102767,NM_001141981,NM_030243,uc008jqk.2,uc008jql.2_5end|description=CAGE_peak_1_at_Rbm43_5end|id=chr2:51790463..51790535,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!2.79e-15!131;UBERON:0009142!2.79e-15!131;UBERON:0000926!3.28e-15!193;UBERON:0004120!3.28e-15!193;UBERON:0006603!3.28e-15!193;UBERON:0002405!5.42e-10!70;UBERON:0005057!2.75e-09!51;UBERON:0005256!8.10e-09!47;UBERON:0009569!1.10e-08!66;UBERON:0000077!1.17e-08!97;UBERON:0001041!1.25e-08!92;UBERON:0002100!3.41e-08!98;UBERON:0001048!1.48e-07!147;UBERON:0002390!1.98e-07!45;UBERON:0003061!1.98e-07!45;UBERON:0003081!2.20e-07!88;UBERON:0002193!3.43e-07!48;UBERON:0002530!5.01e-07!65;UBERON:0000466!5.62e-07!79;UBERON:0004177!8.17e-07!29;UBERON:0000490!9.26e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.51e-11,90;UBERON:0000926,4.70e-10,120;UBERON:0004120,4.70e-10,120;UBERON:0006603,4.70e-10,120;UBERON:0001041,5.15e-10,80;UBERON:0005256,1.22e-09,45;UBERON:0009569,1.10e-08,66;UBERON:0003104,1.13e-08,61;UBERON:0009142,1.13e-08,61;UBERON:0001048,7.29e-08,134;UBERON:0005177,1.77e-07,79;UBERON:0002390,1.98e-07,45;UBERON:0003061,1.98e-07,45;UBERON:0002193,3.43e-07,48;UBERON:0002405,3.43e-07,48;UBERON:0002530,5.01e-07,65;UBERON:0003081,5.47e-07,87;UBERON:0004177,8.16e-07,29;UBERON:0005057,8.16e-07,29;UBERON:0000077,8.81e-07,35;UBERON:0000490,9.59e-07,66|phase1_expression=4.96461426024861,1.39590163055744,1.36499771816861,0.60492842261366,0.500895729946347,3.52546471014969,2.80335168714631,18.2063886052623,1.40788722151667,0.234064526321993,2.05461561870606,1.43589886191606,16.0928686135333,16.5224560571905,19.6534759471241,24.7019826215588,26.5833513688696,19.4009231695316,18.2362196695633,16.9755860719212,5.86798702042381,13.2056965097177,12.7987896678078,3.83981814704176,2.98232065387321,2.29692785646008,2.15380998079537,1.50829862880122,1.71021077510736,1.00812051903972,1.77384408524244,8.25539875497521,7.38077745101484,0,5.48818077527422,6.81562045969819,6.12508068787107,28.4601508901097,22.6587249911902,26.1761871986899,34.1174263057988,37.5675016727145,36.8987868303677,11.0789199818508,9.63080846585388,8.25960384727567,4.69434806608824,2.8343270329458,3.73466510648602,5.24960727500565,7.97922603264566,2.87505128729943,8.55691290894455,2.90144856804538,4.7053131879945,9.00408026125814,12.8940047972441,10.8291139378263,0,0,1.90149421051854,3.38844532069132,9.78224275722253,3.1496490104849,2.96659908770092,2.8419204597844,1.49800055259202,2.30530983192933,1.14058573539325,0.945041568321835,0.630974884054146,1.71390590642282,1.98781686856452,0.734944795289724,1.15014565221884,0,7.70811166995721,3.70293280447044,5.83704826373725,0.131886287730194,0.182975287204819,0,4.4669279840221,4.50210088025344,4.73674568108111,0.589257170947335,2.98980529678116,0.372798891650601,1.66597625333005,4.6854367266207,10.1452571045587,5.16254326188832,4.0798280022465,3.2382191498269,4.54843492213368,2.68816132258401,8.00533194750986,10.0553890321054,10.3914401841148,9.54016851177919,1.69012103732017,10.2661181931454,17.8363667794652,7.11066703153331,6.061749148314,5.32055717497707,4.04419556011827,5.02409070763864,23.5633474118926,11.875371125186,4.68410382268567,4.87144765299426,5.5347719341454,7.53613202763113,6.93773372100658,11.9383261763192,1.48316980640624,7.51916655983541,18.5768215909474,7.117741397686,10.8212344045593,14.0613823409214,0,4.68449275218475,4.81727425670947,4.08731288333746,6.23038647430785,8.39863823390771,7.24300294316469,5.69204429738326,2.28750301409313,3.01570445070875,3.82413504423008,4.34716277461562,4.77912502486988,1.78465389374533,7.63795228877372,8.70848794270651,8.59257378674494,7.36546495602659,3.513251959993,3.21862946206862,3.60124259610698,2.86339153887859,2.38127747029647,1.7935920839879,2.15513966487376,4.13925393182425,3.23351989399263,2.64748512234947,4.39877810409872,3.28793598641362,6.67313398141435,2.089512999133,5.35033554660653,5.17489093728082,2.1066395619397,6.43369767786788,6.25159698670304,3.52113813310353,3.28336483973535,2.70093092191522,4.02466050494857,4.52557733019029,5.09081472528348,4.88321283975857,4.56064782379353,4.67061369468678,4.60767579757745,5.08919138645195,3.89130285820108,5.4093995347373,4.83010253640311,4.96563749413376,4.41608891984667,1.9551876352064,2.97376904685418,4.49565963328025,2.98603550749328,3.25131340604614,2.70621668776396,2.42020229548011,2.66853652613844,3.42406127002606,2.84717436926707,2.63518327558417,3.51869292320377,4.37704238490532,5.45899443933536,4.49409704327111,5.83572734661674,3.78368419183298,2.65535061334314,3.19895835307241,4.50830942692322,3.66572390121566,4.46090720485539,3.85747009396752,6.13394410105296,5.75679577120448,6.90794402502049,5.30607804863742,5.03969466048153,9.67701613153345,11.7935397067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|EntrezGene=71684
|HGNC=
|MCL_coexpression_id=1384
|UniProt=Q99J64,A2AU66
|association_with_transcript=0bp_to_ENSMUST00000039138,ENSMUST00000102767,NM_001141981,NM_030243,uc008jqk.2,uc008jql.2_5end
|description=CAGE_peak_1_at_Rbm43_5end
|id=chr2:51790463..51790535,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003104!2.79e-15!131;UBERON:0009142!2.79e-15!131;UBERON:0000926!3.28e-15!193;UBERON:0004120!3.28e-15!193;UBERON:0006603!3.28e-15!193;UBERON:0002405!5.42e-10!70;UBERON:0005057!2.75e-09!51;UBERON:0005256!8.10e-09!47;UBERON:0009569!1.10e-08!66;UBERON:0000077!1.17e-08!97;UBERON:0001041!1.25e-08!92;UBERON:0002100!3.41e-08!98;UBERON:0001048!1.48e-07!147;UBERON:0002390!1.98e-07!45;UBERON:0003061!1.98e-07!45;UBERON:0003081!2.20e-07!88;UBERON:0002193!3.43e-07!48;UBERON:0002530!5.01e-07!65;UBERON:0000466!5.62e-07!79;UBERON:0004177!8.17e-07!29;UBERON:0000490!9.26e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.51e-11,90;UBERON:0000926,4.70e-10,120;UBERON:0004120,4.70e-10,120;UBERON:0006603,4.70e-10,120;UBERON:0001041,5.15e-10,80;UBERON:0005256,1.22e-09,45;UBERON:0009569,1.10e-08,66;UBERON:0003104,1.13e-08,61;UBERON:0009142,1.13e-08,61;UBERON:0001048,7.29e-08,134;UBERON:0005177,1.77e-07,79;UBERON:0002390,1.98e-07,45;UBERON:0003061,1.98e-07,45;UBERON:0002193,3.43e-07,48;UBERON:0002405,3.43e-07,48;UBERON:0002530,5.01e-07,65;UBERON:0003081,5.47e-07,87;UBERON:0004177,8.16e-07,29;UBERON:0005057,8.16e-07,29;UBERON:0000077,8.81e-07,35;UBERON:0000490,9.59e-07,66
|phase1_expression=4.96461426024861,1.39590163055744,1.36499771816861,0.60492842261366,0.500895729946347,3.52546471014969,2.80335168714631,18.2063886052623,1.40788722151667,0.234064526321993,2.05461561870606,1.43589886191606,16.0928686135333,16.5224560571905,19.6534759471241,24.7019826215588,26.5833513688696,19.4009231695316,18.2362196695633,16.9755860719212,5.86798702042381,13.2056965097177,12.7987896678078,3.83981814704176,2.98232065387321,2.29692785646008,2.15380998079537,1.50829862880122,1.71021077510736,1.00812051903972,1.77384408524244,8.25539875497521,7.38077745101484,0,5.48818077527422,6.81562045969819,6.12508068787107,28.4601508901097,22.6587249911902,26.1761871986899,34.1174263057988,37.5675016727145,36.8987868303677,11.0789199818508,9.63080846585388,8.25960384727567,4.69434806608824,2.8343270329458,3.73466510648602,5.24960727500565,7.97922603264566,2.87505128729943,8.55691290894455,2.90144856804538,4.7053131879945,9.00408026125814,12.8940047972441,10.8291139378263,0,0,1.90149421051854,3.38844532069132,9.78224275722253,3.1496490104849,2.96659908770092,2.8419204597844,1.49800055259202,2.30530983192933,1.14058573539325,0.945041568321835,0.630974884054146,1.71390590642282,1.98781686856452,0.734944795289724,1.15014565221884,0,7.70811166995721,3.70293280447044,5.83704826373725,0.131886287730194,0.182975287204819,0,4.4669279840221,4.50210088025344,4.73674568108111,0.589257170947335,2.98980529678116,0.372798891650601,1.66597625333005,4.6854367266207,10.1452571045587,5.16254326188832,4.0798280022465,3.2382191498269,4.54843492213368,2.68816132258401,8.00533194750986,10.0553890321054,10.3914401841148,9.54016851177919,1.69012103732017,10.2661181931454,17.8363667794652,7.11066703153331,6.061749148314,5.32055717497707,4.04419556011827,5.02409070763864,23.5633474118926,11.875371125186,4.68410382268567,4.87144765299426,5.5347719341454,7.53613202763113,6.93773372100658,11.9383261763192,1.48316980640624,7.51916655983541,18.5768215909474,7.117741397686,10.8212344045593,14.0613823409214,0,4.68449275218475,4.81727425670947,4.08731288333746,6.23038647430785,8.39863823390771,7.24300294316469,5.69204429738326,2.28750301409313,3.01570445070875,3.82413504423008,4.34716277461562,4.77912502486988,1.78465389374533,7.63795228877372,8.70848794270651,8.59257378674494,7.36546495602659,3.513251959993,3.21862946206862,3.60124259610698,2.86339153887859,2.38127747029647,1.7935920839879,2.15513966487376,4.13925393182425,3.23351989399263,2.64748512234947,4.39877810409872,3.28793598641362,6.67313398141435,2.089512999133,5.35033554660653,5.17489093728082,2.1066395619397,6.43369767786788,6.25159698670304,3.52113813310353,3.28336483973535,2.70093092191522,4.02466050494857,4.52557733019029,5.09081472528348,4.88321283975857,4.56064782379353,4.67061369468678,4.60767579757745,5.08919138645195,3.89130285820108,5.4093995347373,4.83010253640311,4.96563749413376,4.41608891984667,1.9551876352064,2.97376904685418,4.49565963328025,2.98603550749328,3.25131340604614,2.70621668776396,2.42020229548011,2.66853652613844,3.42406127002606,2.84717436926707,2.63518327558417,3.51869292320377,4.37704238490532,5.45899443933536,4.49409704327111,5.83572734661674,3.78368419183298,2.65535061334314,3.19895835307241,4.50830942692322,3.66572390121566,4.46090720485539,3.85747009396752,6.13394410105296,5.75679577120448,6.90794402502049,5.30607804863742,5.03969466048153,9.67701613153345,11.7935397067922,12.5922782935518,11.5630269191447,13.0235666266305,13.7497959961967,12.9463261852865,8.59316701907687,7.13859674289012,4.31304619582064,7.44281895337007,6.24075346229121,8.5876818502018,6.99649912735457,6.27176577772377,14.2259956428286,3.41084541186873,3.42226450528254,4.41337223015489,8.21415869009757,6.03022526790537,9.75978927632656,5.65887578787617,10.4039195110086,8.858587585951,7.97273843287435,13.4367918066905,12.6060036762104,11.5719246865209,15.0791283939272,28.8270012423916,5.90117127622843,6.07060841870411,3.69266356971921,4.21962071731931,7.37707254195039,2.27223834483936,7.2566890465739,1.95219372148319,3.44677436372478,2.86762557543062,3.11918143715352,1.98153571552183,4.85772842009873,3.50707029493574,4.74345333535828,3.53453448063988,6.52924391958036,3.20518086601059,5.70104357737516,13.857490329693,2.65490276679926,1.94224508923985,3.93020624054176,5.09233715340925,4.13422650033082,4.61152721915891,5.42699415653264,6.18007340111759,5.70395805415554,3.47640433729398,5.27093042874994,5.15677716240934,12.9367050186439,1.62054984628179,2.19909762430683,2.7863814554107,3.3694644392032,4.10248280484762,7.89835298890181,3.04464949114599,3.52007562095566,2.33015277950202,13.6727606794076,8.90385765883992,4.52100394748536,4.52346936961169,3.22305328808468,4.43180429311665,3.49777003955821,5.37733375830478,22.7258271461144,9.49379592630823,14.0747840800981,31.080795405774,24.1948783066215,28.8260498240219,11.0485979496006,11.8958734475109,11.1941978781583,1.90934123603023,3.47969592939249,5.69294507955176,4.32021363287205,3.76358932826044,3.27543845619266,4.45052343069908,7.10819719237889,5.75863072364865,4.01806417204558,12.4267862617385,6.76431526421028,4.03694674318743,3.97100377097034,7.00024278038572,5.03723311563151,6.75824501963113,5.75050469364194,5.85919731797776,4.40409246587986,0.966336483304024,4.89651010638371,9.79634473947353,9.12263468805739,12.7361586884386,12.3424781828905,9.667441566044,4.96703386953162,10.2166132091974,9.15675068482379,11.1063094942962,8.07792150542998,10.4859232542314,10.4279932391535,9.90981968895393,7.24636793525727,5.66825959038028,7.32553646134413,8.25367480807176,5.54019234001459,8.113962949352,8.07034644440082,9.89018771043231,5.57357785605571,12.5393026008841,3.95326289831947,4.14292712856459,6.87474616127276,8.07709957015332,4.7955776383945,4.5323633843382,9.45031500324528,6.30449684513909,5.89085131679466,3.10656187051092,2.28332164685189,2.79317411380722,2.73173769206615,4.37592090722929,6.28839487883947,4.77993121970037,3.55594764482584,3.7086310303001,1.60459604795908,2.52697211763797,4.05566879824384,3.39527414494937,3.7456602987953,3.07320731543373,3.27382173046996,4.76293691283074,4.98302601562879,4.05109362973781,2.47251540481984,3.82717192349433,3.08582327146874,2.30718548007139,4.5302876089991,3.48831399917588,3.48204707536723,3.04612588410035,2.92684756596436,4.47218509444333,3.66671107383827,2.24456908663095,2.72860541685601,3.94017929502254,2.04615521584845,3.71848418846318,3.08650577569826,1.74867404556562,5.6143586026898,3.00819475667618,3.25190164517034,5.7353768971074,5.56482805489012
|short_description=p1@Rbm43
}}

Revision as of 00:05, 14 September 2013

Short description:p1@Rbm43
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rbm43_5end
Coexpression cluster:MCL_coexpression_mm9:1384
Association with transcript: 0bp_to_ENSMUST00000039138, ENSMUST00000102767, NM_001141981, NM_030243, uc008jqk.2, uc008jql.2_5end
EntrezGene:Rbm43
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Rbm43

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E416.09
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E816.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A119.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A324.70
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A526.58
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.40
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.24
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H213.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.80
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H122.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H326.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G934.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H237.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H436.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.63
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.26
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.83
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F94.69
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.02
accessory axillary lymph node, adult.CNhs10475.1063-29H923.56
adrenal gland, adult.CNhs10508.49-24D711.88
adrenal gland, embryo E14.CNhs11038.406-44C54.68
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F57.54
adrenal gland, neonate N00.CNhs11191.1311-23C16.94
adrenal gland, neonate N25.CNhs11223.1377-27I311.94
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H17.52
bone (os femoris), adult.CNhs10483.56-12G218.58
bone (os femoris), neonate N02.CNhs11227.1985-43F57.12
bone (os femoris), neonate N16.CNhs11225.1525-43A610.82
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.23
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.24
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.64
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.71
epididymis, adult.CNhs10490.58-23B28.59
eyeball, adult.CNhs10484.31-12G47.37
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E23.23
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E76.67
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I65.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.43
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C65.09
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E34.67
heart, neonate N03.CNhs11221.1349-25I24.61
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G13.89
heart, neonate N20.CNhs11127.821-26I65.41
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D24.97
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E35.84
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F83.20
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C74.46
kidney, neonate N00.CNhs11214.646-21G73.86
kidney, neonate N10.CNhs11206.758-6D56.13
kidney, neonate N20.CNhs11113.832-19I15.76
kidney, neonate N25.CNhs11122.1353-25F36.91
kidney, neonate N30.CNhs11203.1385-42H15.31
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F89.68
liver, embryo E13.CNhs10524.378-3H611.79
liver, embryo E14.CNhs10594.409-16E112.59
liver, embryo E15.CNhs10520.433-16D711.56
liver, embryo E16.CNhs10523.462-17F513.02
liver, embryo E17.CNhs10510.481-18A313.75
liver, embryo E18.CNhs10579.499-43G412.95
liver, neonate N00.CNhs11117.641-24F48.59
liver, neonate N03.CNhs11123.1345-25G27.14
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H27.44
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C54.41
lung, embryo E16.CNhs10998.458-17B68.21
lung, embryo E17.CNhs10605.480-44A66.03
lung, embryo E18.CNhs10583.1287-20I69.76
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A413.44
lung, neonate N25.CNhs11119.1359-25C712.61
lung, neonate N30.CNhs11133.1394-42H211.57
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A128.83
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.38
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I76.53
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I45.70
oviduct, adult pregnant day01.CNhs10500.988-6G613.86
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E55.09
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G812.94
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F57.90
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F813.67
skin, adult.CNhs10492.30-1C38.90
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H34.52
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G222.73
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F214.07
spleen, neonate N10.CNhs11116.752-24D131.08
spleen, neonate N20.CNhs11112.824-19H124.19
spleen, neonate N25.CNhs11099.1354-25G328.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.19
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A97.11
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I55.04
testis, embryo E18.CNhs11027.503-18G56.76
testis, neonate N00.CNhs11189.1300-22B75.75
testis, neonate N07.CNhs11222.726-26I45.86
testis, neonate N10.CNhs11204.763-44D94.40
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B59.80
thymus, embryo E14.CNhs11041.402-44I49.12
thymus, embryo E15.CNhs11005.430-45I212.74
thymus, embryo E16.CNhs11002.456-26C512.34
thymus, embryo E17.CNhs10581.478-18C19.67
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F810.22
thymus, neonate N03.CNhs11137.2104-43C79.16
thymus, neonate N06.CNhs11197.681-26C411.11
thymus, neonate N07.CNhs11211.713-19D38.08
thymus, neonate N10.CNhs11194.748-24E410.49
thymus, neonate N20.CNhs11186.820-7A210.43
thymus, neonate N25.CNhs11125.1362-25G79.91
thymus, neonate N30.CNhs11132.1393-42G27.25
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.25
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.54
urinary bladder, adult.CNhs10481.879-12E48.11
uterus, adult pregnant day19.CNhs10497.590-15F58.07
uterus, adult.CNhs10509.92-27E59.89
vagina, adult.CNhs10502.89-27D55.57
vesicular gland, adult.CNhs10491.51-27F812.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B45.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk3.51e-1190
mesoderm4.70e-10120
mesoderm-derived structure4.70e-10120
presumptive mesoderm4.70e-10120
foregut5.15e-1080
trunk mesenchyme1.22e-0945
subdivision of trunk1.10e-0866
mesenchyme1.13e-0861
entire embryonic mesenchyme1.13e-0861
primordium7.29e-08134
trunk region element1.77e-0779
hematopoietic system1.98e-0745
blood island1.98e-0745
hemolymphoid system3.43e-0748
immune system3.43e-0748
gland5.01e-0765
lateral plate mesoderm5.47e-0787
hemopoietic organ8.16e-0729
immune organ8.16e-0729
mixed endoderm/mesoderm-derived structure8.81e-0735
unilaminar epithelium9.59e-0766







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