FFCP PHASE1:Hg19::chr7:107883821..107883841,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4897|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7994|TSSclassifier=W|UniProt=C9JH43|association_with_transcript=-137bp_to_ENST00000417701_5end|coexpression_cluster_id=C445|description=CAGE_peak_7_at_NRCAM_5end|id=chr7:107883821..107883841,-|ontology_enrichment_celltype=CL:0000064!2.93e-13!3;CL:0005012!2.93e-13!3;CL:0000067!2.93e-13!3;CL:0002304!2.93e-13!3;CL:0000453!3.75e-07!5|ontology_enrichment_celltype_v019=CL:0000064;1.84e-32;3!CL:0000067;1.84e-32;3!CL:0005012;1.84e-32;3!CL:0002304;1.84e-32;3!CL:0000306;1.07e-11;4!CL:0002222;1.07e-11;4!CL:0002224;1.07e-11;4!CL:0000075;8.46e-10;27|ontology_enrichment_celltype_v019_2=CL:0000064,1.95e-32,3;CL:0000067,1.95e-32,3;CL:0005012,1.95e-32,3;CL:0002304,1.95e-32,3;CL:0000306,1.07e-11,4;CL:0002222,1.07e-11,4;CL:0002224,1.07e-11,4;CL:0000075,8.54e-10,27|ontology_enrichment_development_v019=UBERON:0010122;1.02e-21;2!UBERON:0006222;5.05e-12;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.70e-68!57;UBERON:0005068!1.70e-68!57;UBERON:0006241!1.70e-68!57;UBERON:0007135!1.70e-68!57;UBERON:0002780!2.53e-65!41;UBERON:0001890!2.53e-65!41;UBERON:0006240!2.53e-65!41;UBERON:0003080!1.23e-63!42;UBERON:0003075!1.49e-62!86;UBERON:0007284!1.49e-62!86;UBERON:0002616!6.99e-62!59;UBERON:0003056!6.22e-61!61;UBERON:0002346!2.13e-59!90;UBERON:0000955!1.45e-54!69;UBERON:0006238!1.45e-54!69;UBERON:0001893!9.07e-52!34;UBERON:0001017!6.46e-51!82;UBERON:0001869!3.44e-50!32;UBERON:0002791!1.15e-48!33;UBERON:0005743!3.29e-48!86;UBERON:0002020!7.74e-47!34;UBERON:0003528!7.74e-47!34;UBERON:0000073!1.49e-45!94;UBERON:0001016!1.49e-45!94;UBERON:0000033!8.36e-41!123;UBERON:0000153!1.64e-38!129;UBERON:0007811!1.64e-38!129;UBERON:0001950!3.69e-31!20;UBERON:0007023!1.47e-30!115;UBERON:0004121!1.78e-30!169;UBERON:0000924!1.45e-29!173;UBERON:0006601!1.45e-29!173;UBERON:0000956!1.49e-28!25;UBERON:0000203!1.49e-28!25;UBERON:0002619!3.59e-28!22;UBERON:0002420!8.03e-21!9;UBERON:0007245!8.03e-21!9;UBERON:0010009!8.03e-21!9;UBERON:0010011!8.03e-21!9;UBERON:0000454!8.03e-21!9;UBERON:0002308!9.05e-21!9;UBERON:0000125!9.05e-21!9;UBERON:0009663!2.65e-20!7;UBERON:0000025!4.14e-17!194;UBERON:0000369!1.24e-16!4;UBERON:0002435!1.24e-16!4;UBERON:0000204!1.24e-16!4;UBERON:0010082!1.24e-16!4;UBERON:0000200!3.89e-15!6;UBERON:0001894!8.94e-15!7;UBERON:0006222!8.94e-15!7;UBERON:0000483!1.16e-13!309;UBERON:0000119!1.94e-13!312;UBERON:0001778!2.93e-13!3;UBERON:0001775!2.93e-13!3;UBERON:0005383!5.35e-13!3;UBERON:0005382!5.35e-13!3;UBERON:0000477!1.67e-12!286;UBERON:0001872!2.06e-12!5;UBERON:0004111!3.67e-12!241;UBERON:0002771!1.65e-11!3;UBERON:0000064!3.55e-11!219;UBERON:0001871!4.25e-11!7;UBERON:0000475!4.23e-10!365;UBERON:0000488!4.80e-10!4;UBERON:0000007!1.66e-09!2;UBERON:0007625!2.43e-09!11;UBERON:0001873!3.04e-09!2;UBERON:0010122!3.04e-09!2;UBERON:0001897!3.43e-09!2;UBERON:0001875!6.73e-09!2;UBERON:0006514!6.73e-09!2;UBERON:0003076!2.20e-08!15;UBERON:0003057!2.20e-08!15;UBERON:0002298!1.04e-07!8;UBERON:0004733!1.47e-07!12;UBERON:0002028!1.47e-07!12;UBERON:0007277!1.47e-07!12;UBERON:0001801!2.97e-07!14;UBERON:0002021!4.37e-07!5;UBERON:0004732!5.90e-07!13;UBERON:0002203!8.21e-07!6;UBERON:0001768!8.21e-07!6;UBERON:0000970!8.27e-07!20|ontology_enrichment_uberon_v019=UBERON:0000369;2.33e-41;4!UBERON:0002435;2.33e-41;4!UBERON:0000204;2.33e-41;4!UBERON:0009663;1.31e-36;7!UBERON:0001778;1.84e-32;3!UBERON:0001775;1.84e-32;3!UBERON:0005383;1.54e-31;3!UBERON:0005382;1.54e-31;3!UBERON:0002420;1.70e-28;9!UBERON:0000125;1.70e-28;9!UBERON:0007245;1.70e-28;9!UBERON:0002308;1.70e-28;9!UBERON:0010009;1.70e-28;9!UBERON:0010011;1.70e-28;9!UBERON:0000454;1.70e-28;9!UBERON:0001894;9.96e-25;7!UBERON:0000488;1.57e-24;4!UBERON:0007625;3.75e-24;11!UBERON:0000007;1.76e-22;2!UBERON:0001873;1.02e-21;2!UBERON:0002780;3.06e-21;41!UBERON:0001890;3.06e-21;41!UBERON:0001801;5.63e-19;14!UBERON:0000073;2.69e-17;53!UBERON:0002616;2.69e-17;53!UBERON:0002203;1.42e-16;6!UBERON:0001768;1.42e-16;6!UBERON:0002200;1.42e-16;6!UBERON:0000019;5.72e-14;19!UBERON:0000047;5.72e-14;19!UBERON:0004088;5.72e-14;19!UBERON:0010230;5.72e-14;19!UBERON:0000970;2.88e-13;20!UBERON:0002104;1.25e-12;21!UBERON:0001456;1.25e-12;21!UBERON:0001893;1.29e-12;34!UBERON:0000955;2.85e-12;68!UBERON:0003296;9.89e-12;4!UBERON:0010133;9.89e-12;4!UBERON:0010077;1.07e-11;4!UBERON:0005389;1.07e-11;4!UBERON:0000484;1.07e-11;4!UBERON:0000965;1.07e-11;4!UBERON:0001803;1.07e-11;4!UBERON:0001882;1.25e-11;1!UBERON:0002336;1.25e-11;1!UBERON:0001874;1.25e-11;1!UBERON:0011215;1.25e-11;1!UBERON:0001018;1.25e-11;1!UBERON:0002473;1.25e-11;1!UBERON:0005340;1.25e-11;1!UBERON:0003544;1.25e-11;1!UBERON:0005970;1.25e-11;1!UBERON:0002316;1.25e-11;1!UBERON:0001020;1.25e-11;1!UBERON:0005403;1.25e-11;1!UBERON:0002437;1.25e-11;1!UBERON:0000020;1.59e-11;23!UBERON:0002791;2.68e-11;32!UBERON:0001032;4.87e-11;24!UBERON:0004456;4.87e-11;24!UBERON:0001017;5.79e-11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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |||
|TSSclassifier=W | |||
|UniProt=C9JH43 | |||
|association_with_transcript=-137bp_to_ENST00000417701_5end | |||
|coexpression_cluster_id=C445 | |||
|description=CAGE_peak_7_at_NRCAM_5end | |||
|id=chr7:107883821..107883841,- | |||
|ontology_enrichment_celltype=CL:0000064!2.93e-13!3;CL:0005012!2.93e-13!3;CL:0000067!2.93e-13!3;CL:0002304!2.93e-13!3;CL:0000453!3.75e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.84e-32;3!CL:0000067;1.84e-32;3!CL:0005012;1.84e-32;3!CL:0002304;1.84e-32;3!CL:0000306;1.07e-11;4!CL:0002222;1.07e-11;4!CL:0002224;1.07e-11;4!CL:0000075;8.46e-10;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.95e-32,3;CL:0000067,1.95e-32,3;CL:0005012,1.95e-32,3;CL:0002304,1.95e-32,3;CL:0000306,1.07e-11,4;CL:0002222,1.07e-11,4;CL:0002224,1.07e-11,4;CL:0000075,8.54e-10,27 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.02e-21;2!UBERON:0006222;5.05e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p7@NRCAM | |||
}} |
Revision as of 22:42, 13 September 2013
Short description: | p7@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_NRCAM_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | -137bp_to_ENST00000417701_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | C9JH43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.95e-32 | 3 |
ciliated epithelial cell | 1.95e-32 | 3 |
multi-ciliated epithelial cell | 1.95e-32 | 3 |
non-pigmented ciliary epithelial cell | 1.95e-32 | 3 |
crystallin accumulating cell | 1.07e-11 | 4 |
vertebrate lens cell | 1.07e-11 | 4 |
lens epithelial cell | 1.07e-11 | 4 |
columnar/cuboidal epithelial cell | 8.54e-10 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.