FFCP PHASE1:Hg19::chr7:100239338..100239351,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7036|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11762|TSSclassifier=W|UniProt=Q9UP52|association_with_transcript=-137bp_to_uc003uvv.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_10_at_TFR2_5end|id=chr7:100239338..100239351,-|ontology_enrichment_celltype=CL:0000181!4.89e-50!12;CL:0000417!4.89e-50!12;CL:0000668!4.89e-50!12;CL:0000414!4.89e-50!12;CL:0000412!4.89e-50!12;CL:0000182!4.89e-50!12;CL:0000223!8.89e-10!59|ontology_enrichment_celltype_v019=CL:0000182;9.88e-30;12|ontology_enrichment_celltype_v019_2=CL:0000182,9.88e-30,12|ontology_enrichment_development_v019=UBERON:0004161;9.78e-19;11!UBERON:0009497;5.71e-16;13!UBERON:0001041;2.78e-07;30!UBERON:0003104;2.78e-07;31|ontology_enrichment_disease=DOID:8552!1.42e-13!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.10e-52!19;UBERON:0006925!4.10e-52!19;UBERON:0008836!4.10e-52!19;UBERON:0009497!1.46e-48!25;UBERON:0000015!1.46e-48!25;UBERON:0002423!1.46e-48!25;UBERON:0006235!1.46e-48!25;UBERON:0004161!1.46e-48!25;UBERON:0005057!1.43e-46!26;UBERON:0008835!6.66e-45!22;UBERON:0003894!6.66e-45!22;UBERON:0009854!6.46e-43!23;UBERON:0007499!2.03e-39!25;UBERON:0009856!7.16e-38!26;UBERON:0002365!1.25e-31!31;UBERON:0002330!1.25e-31!31;UBERON:0002368!6.48e-28!35;UBERON:0005172!5.30e-26!55;UBERON:0005173!5.30e-26!55;UBERON:0002417!2.54e-23!61;UBERON:0000916!2.54e-23!61;UBERON:0003929!6.35e-22!54;UBERON:0000949!1.64e-21!45;UBERON:0002530!3.52e-16!59;UBERON:0005911!4.82e-14!82;UBERON:0005177!9.98e-13!107;UBERON:0009569!5.60e-12!113;UBERON:0001041!1.56e-11!98;UBERON:0000466!1.34e-10!126;UBERON:0004921!3.05e-10!129;UBERON:0004185!3.05e-10!129;UBERON:0000077!3.15e-10!130;UBERON:0001007!5.46e-10!155;UBERON:0001555!5.46e-10!155;UBERON:0007026!5.46e-10!155;UBERON:0002405!1.50e-09!115;UBERON:0003914!2.20e-09!118;UBERON:0004119!4.91e-09!169;UBERON:0000925!4.91e-09!169;UBERON:0006595!4.91e-09!169;UBERON:0000490!7.69e-08!138;UBERON:0001048!1.38e-07!168;UBERON:0005256!1.60e-07!143|ontology_enrichment_uberon_v019=UBERON:0002107;1.02e-41;19!UBERON:0006925;1.02e-41;19!UBERON:0002423;9.13e-32;25!UBERON:0002365;1.03e-25;31!UBERON:0002330;1.03e-25;31!UBERON:0002368;3.23e-22;33!UBERON:0000949;1.62e-15;43!UBERON:0005172;2.48e-11;52!UBERON:0005173;2.48e-11;52!UBERON:0002417;1.93e-09;58!UBERON:0000916;1.93e-09;58!UBERON:0002114;1.51e-08;2!UBERON:0001007;4.60e-08;81!UBERON:0002530;9.70e-08;57|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.02e-41,19;UBERON:0006925,1.02e-41,19;UBERON:0008836,1.02e-41,19;UBERON:0008835,4.59e-36,22;UBERON:0003894,4.59e-36,22;UBERON:0009854,1.66e-34,23;UBERON:0007499,9.13e-32,25;UBERON:0009497,9.13e-32,25;UBERON:0000015,9.13e-32,25;UBERON:0002423,9.13e-32,25;UBERON:0006235,9.13e-32,25;UBERON:0004161,9.13e-32,25;UBERON:0009856,1.49e-30,26;UBERON:0002365,1.17e-25,31;UBERON:0002330,1.17e-25,31;UBERON:0002368,9.62e-23,35;UBERON:0000949,1.02e-17,45;UBERON:0003929,8.93e-15,54;UBERON:0005172,8.93e-15,54;UBERON:0005173,8.93e-15,54;UBERON:0002530,1.58e-13,59;UBERON:0002417,2.66e-13,60;UBERON:0000916,2.66e-13,60;UBERON:0005911,9.91e-10,82;UBERON:0001041,3.62e-09,87;UBERON:0004921,5.84e-09,118;UBERON:0002114,1.51e-08,2;UBERON:0005177,6.92e-08,101;UBERON:0001007,2.93e-07,145;UBERON:0001555,2.93e-07,145;UBERON:0007026,2.93e-07,145;UBERON:0009569,4.22e-07,112;UBERON:0003914,8.59e-07,117|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,9.82827216677626,7.08947888017685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81251743096572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85989583184795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0.236349546921671,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,11.7241786942466,11.9256200020999,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7036 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11762 | |||
|TSSclassifier=W | |||
|UniProt=Q9UP52 | |||
|association_with_transcript=-137bp_to_uc003uvv.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_10_at_TFR2_5end | |||
|id=chr7:100239338..100239351,- | |||
|ontology_enrichment_celltype=CL:0000181!4.89e-50!12;CL:0000417!4.89e-50!12;CL:0000668!4.89e-50!12;CL:0000414!4.89e-50!12;CL:0000412!4.89e-50!12;CL:0000182!4.89e-50!12;CL:0000223!8.89e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.88e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.88e-30,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.78e-19;11!UBERON:0009497;5.71e-16;13!UBERON:0001041;2.78e-07;30!UBERON:0003104;2.78e-07;31 | |||
|ontology_enrichment_disease=DOID:8552!1.42e-13!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.10e-52!19;UBERON:0006925!4.10e-52!19;UBERON:0008836!4.10e-52!19;UBERON:0009497!1.46e-48!25;UBERON:0000015!1.46e-48!25;UBERON:0002423!1.46e-48!25;UBERON:0006235!1.46e-48!25;UBERON:0004161!1.46e-48!25;UBERON:0005057!1.43e-46!26;UBERON:0008835!6.66e-45!22;UBERON:0003894!6.66e-45!22;UBERON:0009854!6.46e-43!23;UBERON:0007499!2.03e-39!25;UBERON:0009856!7.16e-38!26;UBERON:0002365!1.25e-31!31;UBERON:0002330!1.25e-31!31;UBERON:0002368!6.48e-28!35;UBERON:0005172!5.30e-26!55;UBERON:0005173!5.30e-26!55;UBERON:0002417!2.54e-23!61;UBERON:0000916!2.54e-23!61;UBERON:0003929!6.35e-22!54;UBERON:0000949!1.64e-21!45;UBERON:0002530!3.52e-16!59;UBERON:0005911!4.82e-14!82;UBERON:0005177!9.98e-13!107;UBERON:0009569!5.60e-12!113;UBERON:0001041!1.56e-11!98;UBERON:0000466!1.34e-10!126;UBERON:0004921!3.05e-10!129;UBERON:0004185!3.05e-10!129;UBERON:0000077!3.15e-10!130;UBERON:0001007!5.46e-10!155;UBERON:0001555!5.46e-10!155;UBERON:0007026!5.46e-10!155;UBERON:0002405!1.50e-09!115;UBERON:0003914!2.20e-09!118;UBERON:0004119!4.91e-09!169;UBERON:0000925!4.91e-09!169;UBERON:0006595!4.91e-09!169;UBERON:0000490!7.69e-08!138;UBERON:0001048!1.38e-07!168;UBERON:0005256!1.60e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.02e-41;19!UBERON:0006925;1.02e-41;19!UBERON:0002423;9.13e-32;25!UBERON:0002365;1.03e-25;31!UBERON:0002330;1.03e-25;31!UBERON:0002368;3.23e-22;33!UBERON:0000949;1.62e-15;43!UBERON:0005172;2.48e-11;52!UBERON:0005173;2.48e-11;52!UBERON:0002417;1.93e-09;58!UBERON:0000916;1.93e-09;58!UBERON:0002114;1.51e-08;2!UBERON:0001007;4.60e-08;81!UBERON:0002530;9.70e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.02e-41,19;UBERON:0006925,1.02e-41,19;UBERON:0008836,1.02e-41,19;UBERON:0008835,4.59e-36,22;UBERON:0003894,4.59e-36,22;UBERON:0009854,1.66e-34,23;UBERON:0007499,9.13e-32,25;UBERON:0009497,9.13e-32,25;UBERON:0000015,9.13e-32,25;UBERON:0002423,9.13e-32,25;UBERON:0006235,9.13e-32,25;UBERON:0004161,9.13e-32,25;UBERON:0009856,1.49e-30,26;UBERON:0002365,1.17e-25,31;UBERON:0002330,1.17e-25,31;UBERON:0002368,9.62e-23,35;UBERON:0000949,1.02e-17,45;UBERON:0003929,8.93e-15,54;UBERON:0005172,8.93e-15,54;UBERON:0005173,8.93e-15,54;UBERON:0002530,1.58e-13,59;UBERON:0002417,2.66e-13,60;UBERON:0000916,2.66e-13,60;UBERON:0005911,9.91e-10,82;UBERON:0001041,3.62e-09,87;UBERON:0004921,5.84e-09,118;UBERON:0002114,1.51e-08,2;UBERON:0005177,6.92e-08,101;UBERON:0001007,2.93e-07,145;UBERON:0001555,2.93e-07,145;UBERON:0007026,2.93e-07,145;UBERON:0009569,4.22e-07,112;UBERON:0003914,8.59e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,9.82827216677626,7.08947888017685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81251743096572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85989583184795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0.236349546921671,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,11.7241786942466,11.9256200020999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@TFR2 | |||
}} |
Revision as of 22:16, 13 September 2013
Short description: | p10@TFR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_TFR2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -137bp_to_uc003uvv.1_5end |
EntrezGene: | TFR2 |
HGNC: | 11762 |
UniProt: | Q9UP52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.88e-30 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.02e-41 | 19 |
digestive gland | 1.02e-41 | 19 |
liver bud | 1.02e-41 | 19 |
hepatic diverticulum | 4.59e-36 | 22 |
liver primordium | 4.59e-36 | 22 |
digestive tract diverticulum | 1.66e-34 | 23 |
epithelial sac | 9.13e-32 | 25 |
epithelium of foregut-midgut junction | 9.13e-32 | 25 |
anatomical boundary | 9.13e-32 | 25 |
hepatobiliary system | 9.13e-32 | 25 |
foregut-midgut junction | 9.13e-32 | 25 |
septum transversum | 9.13e-32 | 25 |
sac | 1.49e-30 | 26 |
exocrine gland | 1.17e-25 | 31 |
exocrine system | 1.17e-25 | 31 |
endocrine gland | 9.62e-23 | 35 |
endocrine system | 1.02e-17 | 45 |
gut epithelium | 8.93e-15 | 54 |
abdomen element | 8.93e-15 | 54 |
abdominal segment element | 8.93e-15 | 54 |
gland | 1.58e-13 | 59 |
abdominal segment of trunk | 2.66e-13 | 60 |
abdomen | 2.66e-13 | 60 |
endo-epithelium | 9.91e-10 | 82 |
foregut | 3.62e-09 | 87 |
subdivision of digestive tract | 5.84e-09 | 118 |
duodenum | 1.51e-08 | 2 |
trunk region element | 6.92e-08 | 101 |
digestive system | 2.93e-07 | 145 |
digestive tract | 2.93e-07 | 145 |
primitive gut | 2.93e-07 | 145 |
subdivision of trunk | 4.22e-07 | 112 |
epithelial tube | 8.59e-07 | 117 |
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