FFCP PHASE1:Mm9::chr2:121854322..121854334,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100042807|HGNC=|MCL_coexpression_id=878|UniProt=|association_with_transcript=3bp_to_NM_001256055,NR_045706_5end|description=CAGE_peak_2_at_Gm9781_5end|id=chr2:121854322..121854334,+|ontology_enrichment_celltype=CL:0000063!7.02e-27!66;CL:0000988!4.63e-18!32;CL:0002032!4.63e-18!32;CL:0000037!4.63e-18!32;CL:0000566!4.63e-18!32;CL:0000837!4.63e-18!32;CL:0000144!8.58e-18!121;CL:0000012!8.58e-18!121;CL:0000548!1.95e-16!115;CL:0000004!1.95e-16!115;CL:0000255!1.95e-16!115;CL:0002031!2.14e-16!25;CL:0002320!4.75e-16!46;CL:0000134!4.75e-16!46;CL:0002371!1.09e-15!118;CL:0000219!4.30e-15!54;CL:0000838!7.35e-14!12;CL:0000738!1.16e-12!17;CL:0002087!1.16e-12!17;CL:0000542!1.47e-12!13;CL:0000051!1.47e-12!13;CL:0000791!1.56e-12!9;CL:0000789!1.56e-12!9;CL:0002420!1.56e-12!9;CL:0002419!1.56e-12!9;CL:0000790!1.56e-12!9;CL:0000084!1.85e-12!11;CL:0000827!1.85e-12!11;CL:0002076!9.71e-12!15;CL:0000624!3.72e-11!8;CL:0000034!1.72e-10!97;CL:0000223!1.11e-09!20;CL:0000066!2.19e-09!25;CL:0000893!5.35e-09!6;CL:0002489!5.35e-09!6;CL:0000898!5.35e-09!6;CL:0000809!5.35e-09!6;CL:0000810!5.35e-09!6;CL:0000895!5.35e-09!6;CL:0000808!5.35e-09!6;CL:0000894!5.35e-09!6;CL:0000806!5.35e-09!6;CL:0000807!5.35e-09!6;CL:0000805!5.35e-09!6;CL:0002425!5.35e-09!6;CL:0002436!5.35e-09!6;CL:0002427!5.35e-09!6;CL:0002428!5.35e-09!6;CL:0002429!5.35e-09!6;CL:0002433!5.35e-09!6;CL:0002431!5.35e-09!6;CL:0002432!5.35e-09!6;CL:0000049!1.54e-07!19;CL:0000553!4.38e-07!6;CL:0000556!4.38e-07!6;CL:0000723!7.88e-07!91;CL:0000048!7.88e-07!91|ontology_enrichment_celltype_v019_2=CL:0002031,4.84e-27,25;CL:0000988,7.18e-23,32;CL:0002032,7.18e-23,32;CL:0000037,7.18e-23,32;CL:0000837,7.18e-23,32;CL:0002320,8.72e-23,46;CL:0000134,8.72e-23,46;CL:0000219,1.33e-22,54;CL:0000838,3.13e-20,12;CL:0000738,1.51e-19,17;CL:0002087,1.51e-19,17;CL:0000542,1.60e-18,13;CL:0000051,1.60e-18,13;CL:0000084,8.01e-18,11;CL:0000827,8.01e-18,11;CL:0000791,2.75e-17,9;CL:0000789,2.75e-17,9;CL:0002420,2.75e-17,9;CL:0002419,2.75e-17,9;CL:0000790,2.75e-17,9;CL:0000624,6.44e-15,8;CL:0000893,1.21e-14,6;CL:0002489,1.21e-14,6;CL:0000898,1.21e-14,6;CL:0000809,1.21e-14,6;CL:0000810,1.21e-14,6;CL:0000895,1.21e-14,6;CL:0000808,1.21e-14,6;CL:0000894,1.21e-14,6;CL:0000806,1.21e-14,6;CL:0000807,1.21e-14,6;CL:0000805,1.21e-14,6;CL:0002425,1.21e-14,6;CL:0002436,1.21e-14,6;CL:0002427,1.21e-14,6;CL:0002428,1.21e-14,6;CL:0002429,1.21e-14,6;CL:0002433,1.21e-14,6;CL:0002431,1.21e-14,6;CL:0002432,1.21e-14,6;CL:0000034,9.31e-12,97;CL:0000553,1.20e-11,6;CL:0000556,1.20e-11,6;CL:0000349,1.56e-09,3;CL:0000351,1.56e-09,3;CL:0000763,1.99e-09,16;CL:0000839,3.11e-09,13;CL:0000723,4.43e-09,91;CL:0000048,4.43e-09,91;CL:0002293,4.80e-09,3;CL:0000215,5.42e-08,3;CL:0000049,9.90e-08,19;CL:0002076,1.12e-07,15;CL:0000050,1.25e-07,9;CL:0000223,3.54e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.75e-16!46;UBERON:0002193!1.46e-08!48;UBERON:0002390!1.17e-07!45;UBERON:0003061!1.17e-07!45;UBERON:0002405!7.39e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.72e-23,46;UBERON:0002390,3.73e-13,45;UBERON:0003061,3.73e-13,45;UBERON:0002193,4.29e-12,48;UBERON:0002405,4.29e-12,48;UBERON:0000358,1.56e-09,3;UBERON:0000307,1.56e-09,3;UBERON:0007010,1.56e-09,3;UBERON:0000072,1.82e-09,27;UBERON:0002371,1.99e-09,16;UBERON:0002370,1.16e-07,23;UBERON:0000974,1.16e-07,23;UBERON:0004807,1.16e-07,23;UBERON:0005058,1.16e-07,23;UBERON:0003351,1.16e-07,23;UBERON:0009113,1.16e-07,23;UBERON:0003295,1.16e-07,23;UBERON:0009722,1.16e-07,23;UBERON:0005562,1.16e-07,23;UBERON:0007690,1.16e-07,23;UBERON:0006562,2.82e-07,24;UBERON:0003408,2.82e-07,24;UBERON:0001557,2.82e-07,24;UBERON:0001042,2.82e-07,24;UBERON:0008814,2.82e-07,24;UBERON:0009145,2.82e-07,24|phase1_expression=0.160148847104794,0,0,1.20985684522732,0.500895729946347,0.671517087647559,2.10251376535973,0.129123323441576,1.97104211012333,1.17032263160997,1.54096171402954,1.51567102091139,2.73921167889929,1.83582845079895,0,4.25198061518635,5.59649502502517,1.41957974411207,3.01651753932625,3.81950686618227,0,0,3.39559725880616,0.159992422793407,0,0,0,0,0.760093677825496,0.504060259519861,0,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,3.35565212115473,3.62681071005672,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8931548333296,1.058001841495,2.31891590961342,2.58127163094416,0,0,0,0,0,0,1.29893002301434,1.06001872353102,0.14084341977668,2.56652954828636,2.54805239706646,7.11066703153331,1.29894624606728,0.506719730950197,2.02209778005913,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0,0.381210681219194,0,0,0.125654352112864,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,1.54408744268829,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.339956859987711,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99574716073316,5.02397597013064,4.19711540910196,0,0,0,0,0,0,0,0,1.20297227640581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p2@Gm9781}} | ||
|EntrezGene=100042807 | |||
|HGNC= | |||
|MCL_coexpression_id=878 | |||
|UniProt= | |||
|association_with_transcript=3bp_to_NM_001256055,NR_045706_5end | |||
|description=CAGE_peak_2_at_Gm9781_5end | |||
|id=chr2:121854322..121854334,+ | |||
|ontology_enrichment_celltype=CL:0000063!7.02e-27!66;CL:0000988!4.63e-18!32;CL:0002032!4.63e-18!32;CL:0000037!4.63e-18!32;CL:0000566!4.63e-18!32;CL:0000837!4.63e-18!32;CL:0000144!8.58e-18!121;CL:0000012!8.58e-18!121;CL:0000548!1.95e-16!115;CL:0000004!1.95e-16!115;CL:0000255!1.95e-16!115;CL:0002031!2.14e-16!25;CL:0002320!4.75e-16!46;CL:0000134!4.75e-16!46;CL:0002371!1.09e-15!118;CL:0000219!4.30e-15!54;CL:0000838!7.35e-14!12;CL:0000738!1.16e-12!17;CL:0002087!1.16e-12!17;CL:0000542!1.47e-12!13;CL:0000051!1.47e-12!13;CL:0000791!1.56e-12!9;CL:0000789!1.56e-12!9;CL:0002420!1.56e-12!9;CL:0002419!1.56e-12!9;CL:0000790!1.56e-12!9;CL:0000084!1.85e-12!11;CL:0000827!1.85e-12!11;CL:0002076!9.71e-12!15;CL:0000624!3.72e-11!8;CL:0000034!1.72e-10!97;CL:0000223!1.11e-09!20;CL:0000066!2.19e-09!25;CL:0000893!5.35e-09!6;CL:0002489!5.35e-09!6;CL:0000898!5.35e-09!6;CL:0000809!5.35e-09!6;CL:0000810!5.35e-09!6;CL:0000895!5.35e-09!6;CL:0000808!5.35e-09!6;CL:0000894!5.35e-09!6;CL:0000806!5.35e-09!6;CL:0000807!5.35e-09!6;CL:0000805!5.35e-09!6;CL:0002425!5.35e-09!6;CL:0002436!5.35e-09!6;CL:0002427!5.35e-09!6;CL:0002428!5.35e-09!6;CL:0002429!5.35e-09!6;CL:0002433!5.35e-09!6;CL:0002431!5.35e-09!6;CL:0002432!5.35e-09!6;CL:0000049!1.54e-07!19;CL:0000553!4.38e-07!6;CL:0000556!4.38e-07!6;CL:0000723!7.88e-07!91;CL:0000048!7.88e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.84e-27,25;CL:0000988,7.18e-23,32;CL:0002032,7.18e-23,32;CL:0000037,7.18e-23,32;CL:0000837,7.18e-23,32;CL:0002320,8.72e-23,46;CL:0000134,8.72e-23,46;CL:0000219,1.33e-22,54;CL:0000838,3.13e-20,12;CL:0000738,1.51e-19,17;CL:0002087,1.51e-19,17;CL:0000542,1.60e-18,13;CL:0000051,1.60e-18,13;CL:0000084,8.01e-18,11;CL:0000827,8.01e-18,11;CL:0000791,2.75e-17,9;CL:0000789,2.75e-17,9;CL:0002420,2.75e-17,9;CL:0002419,2.75e-17,9;CL:0000790,2.75e-17,9;CL:0000624,6.44e-15,8;CL:0000893,1.21e-14,6;CL:0002489,1.21e-14,6;CL:0000898,1.21e-14,6;CL:0000809,1.21e-14,6;CL:0000810,1.21e-14,6;CL:0000895,1.21e-14,6;CL:0000808,1.21e-14,6;CL:0000894,1.21e-14,6;CL:0000806,1.21e-14,6;CL:0000807,1.21e-14,6;CL:0000805,1.21e-14,6;CL:0002425,1.21e-14,6;CL:0002436,1.21e-14,6;CL:0002427,1.21e-14,6;CL:0002428,1.21e-14,6;CL:0002429,1.21e-14,6;CL:0002433,1.21e-14,6;CL:0002431,1.21e-14,6;CL:0002432,1.21e-14,6;CL:0000034,9.31e-12,97;CL:0000553,1.20e-11,6;CL:0000556,1.20e-11,6;CL:0000349,1.56e-09,3;CL:0000351,1.56e-09,3;CL:0000763,1.99e-09,16;CL:0000839,3.11e-09,13;CL:0000723,4.43e-09,91;CL:0000048,4.43e-09,91;CL:0002293,4.80e-09,3;CL:0000215,5.42e-08,3;CL:0000049,9.90e-08,19;CL:0002076,1.12e-07,15;CL:0000050,1.25e-07,9;CL:0000223,3.54e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.75e-16!46;UBERON:0002193!1.46e-08!48;UBERON:0002390!1.17e-07!45;UBERON:0003061!1.17e-07!45;UBERON:0002405!7.39e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.72e-23,46;UBERON:0002390,3.73e-13,45;UBERON:0003061,3.73e-13,45;UBERON:0002193,4.29e-12,48;UBERON:0002405,4.29e-12,48;UBERON:0000358,1.56e-09,3;UBERON:0000307,1.56e-09,3;UBERON:0007010,1.56e-09,3;UBERON:0000072,1.82e-09,27;UBERON:0002371,1.99e-09,16;UBERON:0002370,1.16e-07,23;UBERON:0000974,1.16e-07,23;UBERON:0004807,1.16e-07,23;UBERON:0005058,1.16e-07,23;UBERON:0003351,1.16e-07,23;UBERON:0009113,1.16e-07,23;UBERON:0003295,1.16e-07,23;UBERON:0009722,1.16e-07,23;UBERON:0005562,1.16e-07,23;UBERON:0007690,1.16e-07,23;UBERON:0006562,2.82e-07,24;UBERON:0003408,2.82e-07,24;UBERON:0001557,2.82e-07,24;UBERON:0001042,2.82e-07,24;UBERON:0008814,2.82e-07,24;UBERON:0009145,2.82e-07,24 | |||
|phase1_expression=0.160148847104794,0,0,1.20985684522732,0.500895729946347,0.671517087647559,2.10251376535973,0.129123323441576,1.97104211012333,1.17032263160997,1.54096171402954,1.51567102091139,2.73921167889929,1.83582845079895,0,4.25198061518635,5.59649502502517,1.41957974411207,3.01651753932625,3.81950686618227,0,0,3.39559725880616,0.159992422793407,0,0,0,0,0.760093677825496,0.504060259519861,0,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,3.35565212115473,3.62681071005672,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8931548333296,1.058001841495,2.31891590961342,2.58127163094416,0,0,0,0,0,0,1.29893002301434,1.06001872353102,0.14084341977668,2.56652954828636,2.54805239706646,7.11066703153331,1.29894624606728,0.506719730950197,2.02209778005913,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0,0.381210681219194,0,0,0.125654352112864,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,1.54408744268829,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.339956859987711,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99574716073316,5.02397597013064,4.19711540910196,0,0,0,0,0,0,0,0,1.20297227640581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Gm9781 | |||
}} |
Revision as of 21:52, 13 September 2013
Short description: | p2@Gm9781 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm9781_5end |
Coexpression cluster: | MCL_coexpression_mm9:878 |
Association with transcript: | 3bp_to_NM_001256055, NR_045706_5end |
EntrezGene: | Gm9781 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.72e-23 | 46 |
hematopoietic system | 3.73e-13 | 45 |
blood island | 3.73e-13 | 45 |
hemolymphoid system | 4.29e-12 | 48 |
immune system | 4.29e-12 | 48 |
blastocyst | 1.56e-09 | 3 |
blastula | 1.56e-09 | 3 |
cleaving embryo | 1.56e-09 | 3 |
segment of respiratory tract | 1.82e-09 | 27 |
bone marrow | 1.99e-09 | 16 |
thymus | 1.16e-07 | 23 |
neck | 1.16e-07 | 23 |
respiratory system epithelium | 1.16e-07 | 23 |
hemolymphoid system gland | 1.16e-07 | 23 |
pharyngeal epithelium | 1.16e-07 | 23 |
thymic region | 1.16e-07 | 23 |
pharyngeal gland | 1.16e-07 | 23 |
entire pharyngeal arch endoderm | 1.16e-07 | 23 |
thymus primordium | 1.16e-07 | 23 |
early pharyngeal endoderm | 1.16e-07 | 23 |
pharynx | 2.82e-07 | 24 |
gland of gut | 2.82e-07 | 24 |
upper respiratory tract | 2.82e-07 | 24 |
chordate pharynx | 2.82e-07 | 24 |
pharyngeal arch system | 2.82e-07 | 24 |
pharyngeal region of foregut | 2.82e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.