FFCP PHASE1:Mm9::chr2:11093936..11093954,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18761|HGNC=|MCL_coexpression_id=40|UniProt=Q8CAV6|association_with_transcript=0bp_to_ENSMUST00000102970_5end|description=CAGE_peak_4_at_Prkcq_5end|id=chr2:11093936..11093954,+|ontology_enrichment_celltype=CL:0000791!6.71e-08!9;CL:0000789!6.71e-08!9;CL:0002420!6.71e-08!9;CL:0002419!6.71e-08!9;CL:0000790!6.71e-08!9;CL:0000624!3.49e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,5.25e-13,9;CL:0000789,5.25e-13,9;CL:0002420,5.25e-13,9;CL:0002419,5.25e-13,9;CL:0000790,5.25e-13,9;CL:0000624,1.02e-11,8;CL:0000084,3.98e-10,11;CL:0000827,3.98e-10,11;CL:0000893,4.11e-09,6;CL:0002489,4.11e-09,6;CL:0000898,4.11e-09,6;CL:0000809,4.11e-09,6;CL:0000810,4.11e-09,6;CL:0000895,4.11e-09,6;CL:0000808,4.11e-09,6;CL:0000894,4.11e-09,6;CL:0000806,4.11e-09,6;CL:0000807,4.11e-09,6;CL:0000805,4.11e-09,6;CL:0002425,4.11e-09,6;CL:0002436,4.11e-09,6;CL:0002427,4.11e-09,6;CL:0002428,4.11e-09,6;CL:0002429,4.11e-09,6;CL:0002433,4.11e-09,6;CL:0002431,4.11e-09,6;CL:0002432,4.11e-09,6;CL:0000838,4.71e-09,12;CL:0000542,3.78e-08,13;CL:0000051,3.78e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.25e-11!29;UBERON:0006562!4.40e-10!24;UBERON:0001557!4.40e-10!24;UBERON:0001042!4.40e-10!24;UBERON:0008814!4.40e-10!24;UBERON:0009145!4.40e-10!24;UBERON:0003408!6.18e-10!24;UBERON:0005057!6.49e-10!51;UBERON:0002370!1.40e-09!23;UBERON:0000974!1.40e-09!23;UBERON:0004807!1.40e-09!23;UBERON:0005058!1.40e-09!23;UBERON:0003351!1.40e-09!23;UBERON:0009113!1.40e-09!23;UBERON:0003295!1.40e-09!23;UBERON:0009722!1.40e-09!23;UBERON:0005562!1.40e-09!23;UBERON:0007690!1.40e-09!23;UBERON:0000072!1.24e-07!27;UBERON:0002405!7.99e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.79e-19,29;UBERON:0005057,8.79e-19,29;UBERON:0006562,1.18e-17,24;UBERON:0001557,1.18e-17,24;UBERON:0001042,1.18e-17,24;UBERON:0008814,1.18e-17,24;UBERON:0009145,1.18e-17,24;UBERON:0003408,2.21e-17,24;UBERON:0002370,9.67e-17,23;UBERON:0000974,9.67e-17,23;UBERON:0004807,9.67e-17,23;UBERON:0005058,9.67e-17,23;UBERON:0003351,9.67e-17,23;UBERON:0009113,9.67e-17,23;UBERON:0003295,9.67e-17,23;UBERON:0009722,9.67e-17,23;UBERON:0005562,9.67e-17,23;UBERON:0007690,9.67e-17,23;UBERON:0000077,6.32e-16,35;UBERON:0007811,2.44e-15,36;UBERON:0000072,6.06e-15,27;UBERON:0001004,2.39e-13,42;UBERON:0002193,4.10e-13,48;UBERON:0002405,4.10e-13,48;UBERON:0002390,4.29e-13,45;UBERON:0003061,4.29e-13,45;UBERON:0000065,9.33e-13,41;UBERON:0000153,1.43e-11,43;UBERON:0001041,7.24e-08,80|phase1_expression=0.80074423552397,0,0,0,0,0,0,26.21203465864,4.50523910885334,6.55380673701582,5.30775701499065,5.66382328866889,39.0337664243149,34.968160967599,0.666219523631325,0.809901069559304,0,2.99689057090326,4.9361196098066,1.69755860719212,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,34.8173828165445,22.8543783416875,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,1.14260393761521,1.98781686856452,0.367472397644862,0.0958454710182364,0,1.10115880999389,1.27687338085188,0.921639199537461,0.131886287730194,0.274462930807229,0,0.837548997004143,0,1.22238598221448,1.17851434189467,2.27794689278565,2.42319279572891,0.605809546665472,1.51143120213571,4.63783181922684,0.860423876981386,0,0,0,0,1.96622188184453,0,0,0,1.54927761754349,0,0,0,0,0,0,0.68510327831436,13.2058320660058,0.742210695324124,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.323533699894818,1.54589062922275,1.93950101254089,0,0.585561594023094,0,0.510914110417183,0.11981512450592,0.599902730993408,0,0.748953197024114,0.915001205637253,0,0.695297280769106,1.27857728665165,1.24672826735736,0.811206315338788,0.305518091550949,0.746441823660558,0.252722758433675,0.631325567659422,1.04096354370163,0.919608417733892,1.26043490863744,0.753524089178575,0.748401490664606,0.896796041993948,0.562210347358373,1.29351685369508,0.431135985865684,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.486412857275134,0.292399974850665,0.658650345873152,0.402619256281115,0.841159794256509,0.205809224758569,0.660837565967596,0,0,0,0,0,0,0.570676878337677,1.89811624617805,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,1.01825663922657,0.387904974335251,0.631222379012867,1.70738650235495,2.65698266363284,1.8839847340965,0.987177311374404,0.889357881261447,1.50160595144485,0.982794975566015,0.449724224769707,1.01430060694251,0.72353147925725,0.763877555344259,0.863088412352432,0.810676133875177,0.274561413188081,0,0.744281895337007,0.624075346229121,0,0.717589654087649,0.482443521363367,1.66277871149944,0,0,0.509235257325564,0,0,0,0,0.788175720530955,0.664394068946325,1.11618338060241,1.14704320301017,1.55416483679306,1.73578870297814,0,0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| ||
|EntrezGene=18761 | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|UniProt=Q8CAV6 | |||
|association_with_transcript=0bp_to_ENSMUST00000102970_5end | |||
|description=CAGE_peak_4_at_Prkcq_5end | |||
|id=chr2:11093936..11093954,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.71e-08!9;CL:0000789!6.71e-08!9;CL:0002420!6.71e-08!9;CL:0002419!6.71e-08!9;CL:0000790!6.71e-08!9;CL:0000624!3.49e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.25e-13,9;CL:0000789,5.25e-13,9;CL:0002420,5.25e-13,9;CL:0002419,5.25e-13,9;CL:0000790,5.25e-13,9;CL:0000624,1.02e-11,8;CL:0000084,3.98e-10,11;CL:0000827,3.98e-10,11;CL:0000893,4.11e-09,6;CL:0002489,4.11e-09,6;CL:0000898,4.11e-09,6;CL:0000809,4.11e-09,6;CL:0000810,4.11e-09,6;CL:0000895,4.11e-09,6;CL:0000808,4.11e-09,6;CL:0000894,4.11e-09,6;CL:0000806,4.11e-09,6;CL:0000807,4.11e-09,6;CL:0000805,4.11e-09,6;CL:0002425,4.11e-09,6;CL:0002436,4.11e-09,6;CL:0002427,4.11e-09,6;CL:0002428,4.11e-09,6;CL:0002429,4.11e-09,6;CL:0002433,4.11e-09,6;CL:0002431,4.11e-09,6;CL:0002432,4.11e-09,6;CL:0000838,4.71e-09,12;CL:0000542,3.78e-08,13;CL:0000051,3.78e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.25e-11!29;UBERON:0006562!4.40e-10!24;UBERON:0001557!4.40e-10!24;UBERON:0001042!4.40e-10!24;UBERON:0008814!4.40e-10!24;UBERON:0009145!4.40e-10!24;UBERON:0003408!6.18e-10!24;UBERON:0005057!6.49e-10!51;UBERON:0002370!1.40e-09!23;UBERON:0000974!1.40e-09!23;UBERON:0004807!1.40e-09!23;UBERON:0005058!1.40e-09!23;UBERON:0003351!1.40e-09!23;UBERON:0009113!1.40e-09!23;UBERON:0003295!1.40e-09!23;UBERON:0009722!1.40e-09!23;UBERON:0005562!1.40e-09!23;UBERON:0007690!1.40e-09!23;UBERON:0000072!1.24e-07!27;UBERON:0002405!7.99e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.79e-19,29;UBERON:0005057,8.79e-19,29;UBERON:0006562,1.18e-17,24;UBERON:0001557,1.18e-17,24;UBERON:0001042,1.18e-17,24;UBERON:0008814,1.18e-17,24;UBERON:0009145,1.18e-17,24;UBERON:0003408,2.21e-17,24;UBERON:0002370,9.67e-17,23;UBERON:0000974,9.67e-17,23;UBERON:0004807,9.67e-17,23;UBERON:0005058,9.67e-17,23;UBERON:0003351,9.67e-17,23;UBERON:0009113,9.67e-17,23;UBERON:0003295,9.67e-17,23;UBERON:0009722,9.67e-17,23;UBERON:0005562,9.67e-17,23;UBERON:0007690,9.67e-17,23;UBERON:0000077,6.32e-16,35;UBERON:0007811,2.44e-15,36;UBERON:0000072,6.06e-15,27;UBERON:0001004,2.39e-13,42;UBERON:0002193,4.10e-13,48;UBERON:0002405,4.10e-13,48;UBERON:0002390,4.29e-13,45;UBERON:0003061,4.29e-13,45;UBERON:0000065,9.33e-13,41;UBERON:0000153,1.43e-11,43;UBERON:0001041,7.24e-08,80 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,26.21203465864,4.50523910885334,6.55380673701582,5.30775701499065,5.66382328866889,39.0337664243149,34.968160967599,0.666219523631325,0.809901069559304,0,2.99689057090326,4.9361196098066,1.69755860719212,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,34.8173828165445,22.8543783416875,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,1.14260393761521,1.98781686856452,0.367472397644862,0.0958454710182364,0,1.10115880999389,1.27687338085188,0.921639199537461,0.131886287730194,0.274462930807229,0,0.837548997004143,0,1.22238598221448,1.17851434189467,2.27794689278565,2.42319279572891,0.605809546665472,1.51143120213571,4.63783181922684,0.860423876981386,0,0,0,0,1.96622188184453,0,0,0,1.54927761754349,0,0,0,0,0,0,0.68510327831436,13.2058320660058,0.742210695324124,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.323533699894818,1.54589062922275,1.93950101254089,0,0.585561594023094,0,0.510914110417183,0.11981512450592,0.599902730993408,0,0.748953197024114,0.915001205637253,0,0.695297280769106,1.27857728665165,1.24672826735736,0.811206315338788,0.305518091550949,0.746441823660558,0.252722758433675,0.631325567659422,1.04096354370163,0.919608417733892,1.26043490863744,0.753524089178575,0.748401490664606,0.896796041993948,0.562210347358373,1.29351685369508,0.431135985865684,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.486412857275134,0.292399974850665,0.658650345873152,0.402619256281115,0.841159794256509,0.205809224758569,0.660837565967596,0,0,0,0,0,0,0.570676878337677,1.89811624617805,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,1.01825663922657,0.387904974335251,0.631222379012867,1.70738650235495,2.65698266363284,1.8839847340965,0.987177311374404,0.889357881261447,1.50160595144485,0.982794975566015,0.449724224769707,1.01430060694251,0.72353147925725,0.763877555344259,0.863088412352432,0.810676133875177,0.274561413188081,0,0.744281895337007,0.624075346229121,0,0.717589654087649,0.482443521363367,1.66277871149944,0,0,0.509235257325564,0,0,0,0,0.788175720530955,0.664394068946325,1.11618338060241,1.14704320301017,1.55416483679306,1.73578870297814,0,0,0,0.551873492609465,1.28440471990234,1.40654023910644,0,1.76729649043061,1.57754109708128,1.56175497718655,0.430846795465598,0,0,0,0,1.16902343164525,0.395287777946524,0,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,1.32745138339963,0,0.302323556964751,0,0.295301892880773,0.614870295887855,0,0.363533729477506,0,0,0,0,2.38307724027652,0,0,0,0,0,0,0,0.23467170806371,0,0,0.49465875882444,0.645857706783622,0.603129249281559,0.596861720015682,1.80554989719567,0.874442509889552,2.22510362412612,3.2465467351592,0.206386867963223,0.925972636848558,2.0720530270516,1.50363650493128,2.51655990527175,0.509935289981566,0.839708713941948,1.38199973804424,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0,0.785267825952089,0,1.24267862617385,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,2.52808896502543,1.82452693761148,1.84879722896689,1.03936658382236,1.07416017400489,0.993406773906324,2.76449533895928,2.06765338044408,2.52416124870369,1.82896335972,2.92395936896837,4.48306251402861,3.84847366561318,5.37633750035217,1.81384306892169,0,0,0,0.772758376128762,1.12609485270709,0.73260649706906,0,0,0,0.920650473014354,0,0.343706364687375,0,0.755393897389701,1.35004500046361,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.962757628775446,0.758091635291392,0,0.754505365544305,0.561849044819294,0.640251524048693,0.574354689556133,0,0.579421629724277,1.73618298417335,0.412085900803307,0.735994600671987,1.37147700954166,0.887379030796687,0.238436189947321,0.726732083161643,0.564656282491984,1.09998990259179,0.548783918618318,0.526139422875686,0.679020569229309,0.561142271657738,1.18635018124174,0.985044823755635,0.818462086339379,0.77468420592983,0.385813221962283,0.249810577937946,1.40358965067245,1.07435527024149,0.191288332068843,1.10295709559758,0.695603506861264 | |||
|short_description=p4@Prkcq | |||
}} |
Revision as of 21:36, 13 September 2013
Short description: | p4@Prkcq |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Prkcq_5end |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | 0bp_to_ENSMUST00000102970_5end |
EntrezGene: | Prkcq |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 8.79e-19 | 29 |
immune organ | 8.79e-19 | 29 |
pharynx | 1.18e-17 | 24 |
upper respiratory tract | 1.18e-17 | 24 |
chordate pharynx | 1.18e-17 | 24 |
pharyngeal arch system | 1.18e-17 | 24 |
pharyngeal region of foregut | 1.18e-17 | 24 |
gland of gut | 2.21e-17 | 24 |
thymus | 9.67e-17 | 23 |
neck | 9.67e-17 | 23 |
respiratory system epithelium | 9.67e-17 | 23 |
hemolymphoid system gland | 9.67e-17 | 23 |
pharyngeal epithelium | 9.67e-17 | 23 |
thymic region | 9.67e-17 | 23 |
pharyngeal gland | 9.67e-17 | 23 |
entire pharyngeal arch endoderm | 9.67e-17 | 23 |
thymus primordium | 9.67e-17 | 23 |
early pharyngeal endoderm | 9.67e-17 | 23 |
mixed endoderm/mesoderm-derived structure | 6.32e-16 | 35 |
craniocervical region | 2.44e-15 | 36 |
segment of respiratory tract | 6.06e-15 | 27 |
respiratory system | 2.39e-13 | 42 |
hemolymphoid system | 4.10e-13 | 48 |
immune system | 4.10e-13 | 48 |
hematopoietic system | 4.29e-13 | 45 |
blood island | 4.29e-13 | 45 |
respiratory tract | 9.33e-13 | 41 |
anterior region of body | 1.43e-11 | 43 |
foregut | 7.24e-08 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.