FFCP PHASE1:Hg19::chr6:56112246..56112267,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=81578|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17025|TSSclassifier=S|UniProt=A6PVD9|association_with_transcript=-11bp_to_ENST00000370817_5end|coexpression_cluster_id=C4618|description=CAGE_peak_2_at_COL21A1_5end|id=chr6:56112246..56112267,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002564;4.33e-07;3|ontology_enrichment_celltype_v019_2=CL:0002564,5.82e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.13e-38!115;UBERON:0002616!8.78e-26!59;UBERON:0001017!5.06e-25!82;UBERON:0005743!6.05e-25!86;UBERON:0003075!3.53e-24!86;UBERON:0007284!3.53e-24!86;UBERON:0001049!4.17e-24!57;UBERON:0005068!4.17e-24!57;UBERON:0006241!4.17e-24!57;UBERON:0007135!4.17e-24!57;UBERON:0002346!6.18e-24!90;UBERON:0000153!5.72e-23!129;UBERON:0007811!5.72e-23!129;UBERON:0000955!7.41e-22!69;UBERON:0006238!7.41e-22!69;UBERON:0000033!8.61e-22!123;UBERON:0000073!2.91e-21!94;UBERON:0001016!2.91e-21!94;UBERON:0003056!7.10e-19!61;UBERON:0002780!1.12e-18!41;UBERON:0001890!1.12e-18!41;UBERON:0006240!1.12e-18!41;UBERON:0003080!6.28e-18!42;UBERON:0000924!3.68e-17!173;UBERON:0006601!3.68e-17!173;UBERON:0004121!5.05e-17!169;UBERON:0002020!1.63e-14!34;UBERON:0003528!1.63e-14!34;UBERON:0001893!2.46e-14!34;UBERON:0002791!7.47e-14!33;UBERON:0000481!8.77e-14!347;UBERON:0000475!2.09e-13!365;UBERON:0001869!5.44e-13!32;UBERON:0000468!6.25e-13!659;UBERON:0002619!4.83e-12!22;UBERON:0000922!2.16e-11!612;UBERON:0001950!6.46e-11!20;UBERON:0000477!1.99e-10!286;UBERON:0000483!4.35e-10!309;UBERON:0000119!5.61e-10!312;UBERON:0000956!7.82e-10!25;UBERON:0000203!7.82e-10!25;UBERON:0002050!3.18e-09!605;UBERON:0005423!3.18e-09!605;UBERON:0000923!7.52e-09!604;UBERON:0005291!7.52e-09!604;UBERON:0006598!7.52e-09!604;UBERON:0002532!7.52e-09!604;UBERON:0002200!2.33e-08!11;UBERON:0006876!2.33e-08!11;UBERON:0000467!3.03e-08!625;UBERON:0000480!3.81e-08!626;UBERON:0000062!4.57e-08!511;UBERON:0004111!1.13e-07!241;UBERON:0003076!2.22e-07!15;UBERON:0003057!2.22e-07!15|ontology_enrichment_uberon_v019=UBERON:0002298;3.92e-12;6!UBERON:0005284;7.93e-08;5!UBERON:0004733;9.60e-08;12!UBERON:0002028;9.60e-08;12!UBERON:0011135;2.53e-07;5!UBERON:0002216;2.53e-07;5!UBERON:0011134;2.53e-07;5!UBERON:0002209;2.53e-07;5!UBERON:0002213;2.53e-07;5!UBERON:0007844;2.53e-07;5!UBERON:0011138;2.53e-07;5!UBERON:0001130;2.53e-07;5!UBERON:0001066;2.53e-07;5!UBERON:0001468;2.53e-07;5!UBERON:0006947;2.97e-07;3!UBERON:0004054;2.97e-07;3!UBERON:0002242;4.33e-07;3!UBERON:0004732;4.67e-07;13!UBERON:0001896;5.72e-07;3!UBERON:0005290;5.72e-07;3!UBERON:0001894;7.03e-07;7!UBERON:0000988;8.27e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.16e-22,114;UBERON:0001017,1.83e-13,81;UBERON:0002346,4.42e-13,86;UBERON:0003075,4.60e-13,82;UBERON:0007284,4.60e-13,82;UBERON:0011216,1.40e-12,223;UBERON:0001049,3.97e-12,56;UBERON:0005068,3.97e-12,56;UBERON:0006241,3.97e-12,56;UBERON:0007135,3.97e-12,56;UBERON:0002298,4.14e-12,6;UBERON:0003076,7.65e-12,15;UBERON:0003057,7.65e-12,15;UBERON:0001016,2.25e-11,89;UBERON:0010314,3.00e-11,132;UBERON:0004121,3.93e-11,171;UBERON:0000924,3.93e-11,171;UBERON:0006601,3.93e-11,171;UBERON:0000955,3.23e-10,68;UBERON:0006238,3.23e-10,68;UBERON:0010371,1.27e-09,104;UBERON:0000073,1.95e-09,53;UBERON:0002616,1.95e-09,53;UBERON:0002050,6.43e-09,564;UBERON:0000923,1.43e-08,560;UBERON:0010316,1.43e-08,560;UBERON:0005291,1.43e-08,560;UBERON:0006598,1.43e-08,560;UBERON:0010317,1.43e-08,560;UBERON:0002532,1.43e-08,560;UBERON:0000922,4.95e-08,592;UBERON:0005423,4.96e-08,581;UBERON:0005284,9.16e-08,5;UBERON:0004733,1.02e-07,12;UBERON:0002028,1.02e-07,12;UBERON:0007277,1.02e-07,12;UBERON:0011135,3.30e-07,5;UBERON:0002216,3.30e-07,5;UBERON:0011134,3.30e-07,5;UBERON:0002209,3.30e-07,5;UBERON:0002213,3.30e-07,5;UBERON:0005856,3.30e-07,5;UBERON:0005866,3.30e-07,5;UBERON:0005863,3.30e-07,5;UBERON:0007844,3.30e-07,5;UBERON:0011138,3.30e-07,5;UBERON:0001130,3.30e-07,5;UBERON:0001066,3.30e-07,5;UBERON:0001468,3.30e-07,5;UBERON:0006947,3.32e-07,3;UBERON:0004054,3.32e-07,3;UBERON:0001896,4.18e-07,3;UBERON:0005290,4.18e-07,3;UBERON:0010096,4.18e-07,3;UBERON:0004732,4.91e-07,13;UBERON:0002242,5.82e-07,3;UBERON:0003068,5.82e-07,3;UBERON:0002328,5.82e-07,3;UBERON:0004880,5.82e-07,3;UBERON:0001894,8.25e-07,7;UBERON:0006222,8.25e-07,7|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0.263766978228454,5.19818682432196,0.994192127183747,0,0,0,0,0.492484232307152,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0,0.255725123687061,0,0,0.434539556882471,0,0,1.22895262313288,0.886917589850256,0.263504357079378,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51683351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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=81578 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17025 | |||
|TSSclassifier=S | |||
|UniProt=A6PVD9 | |||
|association_with_transcript=-11bp_to_ENST00000370817_5end | |||
|coexpression_cluster_id=C4618 | |||
|description=CAGE_peak_2_at_COL21A1_5end | |||
|id=chr6:56112246..56112267,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002564;4.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,5.82e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p2@COL21A1 | |||
}} |
Revision as of 21:27, 13 September 2013
Short description: | p2@COL21A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_COL21A1_5end |
Coexpression cluster: | C4618_rectum_skeletal_Fibroblast_aorta_skin_throat_pleomorphic |
Association with transcript: | -11bp_to_ENST00000370817_5end |
EntrezGene: | COL21A1 |
HGNC: | 17025 |
UniProt: | A6PVD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 5.82e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.