FFCP PHASE1:Mm9::chr18:78338906..78338915,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108052|HGNC=|MCL_coexpression_id=123|UniProt=Q8VHL0|association_with_transcript=-48bp_to_ENSMUST00000160639,NM_001171011,uc008fse.1_5end|description=CAGE_peak_4_at_Slc14a1_5end|id=chr18:78338906..78338915,-|ontology_enrichment_celltype=CL:0000838!2.67e-11!12;CL:0000988!2.22e-10!32;CL:0002032!2.22e-10!32;CL:0000037!2.22e-10!32;CL:0000566!2.22e-10!32;CL:0000837!2.22e-10!32;CL:0000542!3.53e-10!13;CL:0000051!3.53e-10!13;CL:0000084!3.83e-10!11;CL:0000827!3.83e-10!11;CL:0002031!5.17e-10!25;CL:0000791!4.46e-08!9;CL:0000789!4.46e-08!9;CL:0002420!4.46e-08!9;CL:0002419!4.46e-08!9;CL:0000790!4.46e-08!9;CL:0000624!3.74e-07!8;CL:0000738!4.76e-07!17;CL:0002087!4.76e-07!17|ontology_enrichment_celltype_v019_2=CL:0000988,7.74e-14,32;CL:0002032,7.74e-14,32;CL:0000037,7.74e-14,32;CL:0000837,7.74e-14,32;CL:0002031,1.05e-12,25;CL:0000553,4.11e-10,6;CL:0000556,4.11e-10,6;CL:0000838,4.24e-10,12;CL:0000542,2.81e-09,13;CL:0000051,2.81e-09,13;CL:0002320,6.16e-09,46;CL:0000134,6.16e-09,46;CL:0000084,7.87e-08,11;CL:0000827,7.87e-08,11;CL:0000219,2.79e-07,54;CL:0000624,3.18e-07,8;CL:0000738,5.92e-07,17;CL:0002087,5.92e-07,17;CL:0000050,9.52e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.26e-16!48;UBERON:0004177!6.29e-15!29;UBERON:0002390!1.36e-14!45;UBERON:0003061!1.36e-14!45;UBERON:0002370!1.06e-12!23;UBERON:0000974!1.06e-12!23;UBERON:0004807!1.06e-12!23;UBERON:0005058!1.06e-12!23;UBERON:0003351!1.06e-12!23;UBERON:0009113!1.06e-12!23;UBERON:0003295!1.06e-12!23;UBERON:0009722!1.06e-12!23;UBERON:0005562!1.06e-12!23;UBERON:0007690!1.06e-12!23;UBERON:0006562!6.12e-12!24;UBERON:0003408!6.12e-12!24;UBERON:0001557!6.12e-12!24;UBERON:0001042!6.12e-12!24;UBERON:0008814!6.12e-12!24;UBERON:0009145!6.12e-12!24;UBERON:0002405!3.23e-11!70;UBERON:0000072!5.20e-10!27;UBERON:0000065!5.30e-09!41;UBERON:0005057!7.65e-09!51;UBERON:0003081!8.99e-09!88;UBERON:0001004!1.24e-08!42|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.29e-17,48;UBERON:0002405,1.29e-17,48;UBERON:0002390,1.64e-16,45;UBERON:0003061,1.64e-16,45;UBERON:0004177,1.83e-14,29;UBERON:0005057,1.83e-14,29;UBERON:0000077,1.31e-11,35;UBERON:0002370,1.58e-10,23;UBERON:0000974,1.58e-10,23;UBERON:0004807,1.58e-10,23;UBERON:0005058,1.58e-10,23;UBERON:0003351,1.58e-10,23;UBERON:0009113,1.58e-10,23;UBERON:0003295,1.58e-10,23;UBERON:0009722,1.58e-10,23;UBERON:0005562,1.58e-10,23;UBERON:0007690,1.58e-10,23;UBERON:0006562,4.96e-10,24;UBERON:0003408,4.96e-10,24;UBERON:0001557,4.96e-10,24;UBERON:0001042,4.96e-10,24;UBERON:0008814,4.96e-10,24;UBERON:0009145,4.96e-10,24;UBERON:0002384,6.16e-09,46;UBERON:0000072,9.27e-09,27;UBERON:0003081,4.77e-07,87|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0,0.234064526321993,0.34243593645101,0.319088635981346,2.22560948910567,2.53519167015092,0.999329285446988,2.02475267389826,0,2.99689057090326,2.87940310572051,1.69755860719212,0.0850432901510698,1.78723712161594,0.783599367416806,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8456086666351,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.84831672011889,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0,0.220841518460394,0,0,0,0,0,2.51611761462433,0,1.14363204365758,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.65954501176592,0,0,0,0,0,0,0.341741761595705,0,0,1.13021074202815,1.50363650493128,1.37266903923914,2.54967644990783,2.6590775941495,1.79659965945751,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,1.26404448251271,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0.240390899039938,0.886137163047463,1.51449674922221,1.295515713135,1.10908803650525,1.36441033035653,1.15454209968395,2.68816875017609,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0.412085900803307,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0.463735671240843|short_description=p4@Slc14a1}} | ||
|EntrezGene=108052 | |||
|HGNC= | |||
|MCL_coexpression_id=123 | |||
|UniProt=Q8VHL0 | |||
|association_with_transcript=-48bp_to_ENSMUST00000160639,NM_001171011,uc008fse.1_5end | |||
|description=CAGE_peak_4_at_Slc14a1_5end | |||
|id=chr18:78338906..78338915,- | |||
|ontology_enrichment_celltype=CL:0000838!2.67e-11!12;CL:0000988!2.22e-10!32;CL:0002032!2.22e-10!32;CL:0000037!2.22e-10!32;CL:0000566!2.22e-10!32;CL:0000837!2.22e-10!32;CL:0000542!3.53e-10!13;CL:0000051!3.53e-10!13;CL:0000084!3.83e-10!11;CL:0000827!3.83e-10!11;CL:0002031!5.17e-10!25;CL:0000791!4.46e-08!9;CL:0000789!4.46e-08!9;CL:0002420!4.46e-08!9;CL:0002419!4.46e-08!9;CL:0000790!4.46e-08!9;CL:0000624!3.74e-07!8;CL:0000738!4.76e-07!17;CL:0002087!4.76e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.74e-14,32;CL:0002032,7.74e-14,32;CL:0000037,7.74e-14,32;CL:0000837,7.74e-14,32;CL:0002031,1.05e-12,25;CL:0000553,4.11e-10,6;CL:0000556,4.11e-10,6;CL:0000838,4.24e-10,12;CL:0000542,2.81e-09,13;CL:0000051,2.81e-09,13;CL:0002320,6.16e-09,46;CL:0000134,6.16e-09,46;CL:0000084,7.87e-08,11;CL:0000827,7.87e-08,11;CL:0000219,2.79e-07,54;CL:0000624,3.18e-07,8;CL:0000738,5.92e-07,17;CL:0002087,5.92e-07,17;CL:0000050,9.52e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.26e-16!48;UBERON:0004177!6.29e-15!29;UBERON:0002390!1.36e-14!45;UBERON:0003061!1.36e-14!45;UBERON:0002370!1.06e-12!23;UBERON:0000974!1.06e-12!23;UBERON:0004807!1.06e-12!23;UBERON:0005058!1.06e-12!23;UBERON:0003351!1.06e-12!23;UBERON:0009113!1.06e-12!23;UBERON:0003295!1.06e-12!23;UBERON:0009722!1.06e-12!23;UBERON:0005562!1.06e-12!23;UBERON:0007690!1.06e-12!23;UBERON:0006562!6.12e-12!24;UBERON:0003408!6.12e-12!24;UBERON:0001557!6.12e-12!24;UBERON:0001042!6.12e-12!24;UBERON:0008814!6.12e-12!24;UBERON:0009145!6.12e-12!24;UBERON:0002405!3.23e-11!70;UBERON:0000072!5.20e-10!27;UBERON:0000065!5.30e-09!41;UBERON:0005057!7.65e-09!51;UBERON:0003081!8.99e-09!88;UBERON:0001004!1.24e-08!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.29e-17,48;UBERON:0002405,1.29e-17,48;UBERON:0002390,1.64e-16,45;UBERON:0003061,1.64e-16,45;UBERON:0004177,1.83e-14,29;UBERON:0005057,1.83e-14,29;UBERON:0000077,1.31e-11,35;UBERON:0002370,1.58e-10,23;UBERON:0000974,1.58e-10,23;UBERON:0004807,1.58e-10,23;UBERON:0005058,1.58e-10,23;UBERON:0003351,1.58e-10,23;UBERON:0009113,1.58e-10,23;UBERON:0003295,1.58e-10,23;UBERON:0009722,1.58e-10,23;UBERON:0005562,1.58e-10,23;UBERON:0007690,1.58e-10,23;UBERON:0006562,4.96e-10,24;UBERON:0003408,4.96e-10,24;UBERON:0001557,4.96e-10,24;UBERON:0001042,4.96e-10,24;UBERON:0008814,4.96e-10,24;UBERON:0009145,4.96e-10,24;UBERON:0002384,6.16e-09,46;UBERON:0000072,9.27e-09,27;UBERON:0003081,4.77e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0,0.234064526321993,0.34243593645101,0.319088635981346,2.22560948910567,2.53519167015092,0.999329285446988,2.02475267389826,0,2.99689057090326,2.87940310572051,1.69755860719212,0.0850432901510698,1.78723712161594,0.783599367416806,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8456086666351,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.84831672011889,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0,0.220841518460394,0,0,0,0,0,2.51611761462433,0,1.14363204365758,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.65954501176592,0,0,0,0,0,0,0.341741761595705,0,0,1.13021074202815,1.50363650493128,1.37266903923914,2.54967644990783,2.6590775941495,1.79659965945751,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,1.26404448251271,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0.240390899039938,0.886137163047463,1.51449674922221,1.295515713135,1.10908803650525,1.36441033035653,1.15454209968395,2.68816875017609,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0.412085900803307,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0.463735671240843 | |||
|short_description=p4@Slc14a1 | |||
}} |
Revision as of 16:48, 13 September 2013
Short description: | p4@Slc14a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc14a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | -48bp_to_ENSMUST00000160639, NM_001171011, uc008fse.1_5end |
EntrezGene: | Slc14a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.74e-14 | 32 |
hematopoietic oligopotent progenitor cell | 7.74e-14 | 32 |
hematopoietic stem cell | 7.74e-14 | 32 |
hematopoietic multipotent progenitor cell | 7.74e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 1.05e-12 | 25 |
megakaryocyte progenitor cell | 4.11e-10 | 6 |
megakaryocyte | 4.11e-10 | 6 |
lymphoid lineage restricted progenitor cell | 4.24e-10 | 12 |
lymphocyte | 2.81e-09 | 13 |
common lymphoid progenitor | 2.81e-09 | 13 |
connective tissue cell | 6.16e-09 | 46 |
mesenchymal cell | 6.16e-09 | 46 |
T cell | 7.87e-08 | 11 |
pro-T cell | 7.87e-08 | 11 |
motile cell | 2.79e-07 | 54 |
CD4-positive, alpha-beta T cell | 3.18e-07 | 8 |
leukocyte | 5.92e-07 | 17 |
nongranular leukocyte | 5.92e-07 | 17 |
megakaryocyte-erythroid progenitor cell | 9.52e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.29e-17 | 48 |
immune system | 1.29e-17 | 48 |
hematopoietic system | 1.64e-16 | 45 |
blood island | 1.64e-16 | 45 |
hemopoietic organ | 1.83e-14 | 29 |
immune organ | 1.83e-14 | 29 |
mixed endoderm/mesoderm-derived structure | 1.31e-11 | 35 |
thymus | 1.58e-10 | 23 |
neck | 1.58e-10 | 23 |
respiratory system epithelium | 1.58e-10 | 23 |
hemolymphoid system gland | 1.58e-10 | 23 |
pharyngeal epithelium | 1.58e-10 | 23 |
thymic region | 1.58e-10 | 23 |
pharyngeal gland | 1.58e-10 | 23 |
entire pharyngeal arch endoderm | 1.58e-10 | 23 |
thymus primordium | 1.58e-10 | 23 |
early pharyngeal endoderm | 1.58e-10 | 23 |
pharynx | 4.96e-10 | 24 |
gland of gut | 4.96e-10 | 24 |
upper respiratory tract | 4.96e-10 | 24 |
chordate pharynx | 4.96e-10 | 24 |
pharyngeal arch system | 4.96e-10 | 24 |
pharyngeal region of foregut | 4.96e-10 | 24 |
connective tissue | 6.16e-09 | 46 |
segment of respiratory tract | 9.27e-09 | 27 |
lateral plate mesoderm | 4.77e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.