FFCP PHASE1:Mm9::chr18:75456937..75456948,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100503117|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=22bp_to_NR_045394_5end|description=CAGE_peak_1_at_2010010A06Rik_5end|id=chr18:75456937..75456948,-|ontology_enrichment_celltype=CL:0002563!5.04e-11!9;CL:0002251!5.04e-11!9;CL:0000239!1.52e-10!6;CL:0000677!1.52e-10!6;CL:0000212!1.52e-10!6;CL:0000584!1.52e-10!6;CL:0000075!7.04e-09!7|ontology_enrichment_celltype_v019_2=CL:0000239,2.98e-14,6;CL:0000677,2.98e-14,6;CL:0000584,2.98e-14,6;CL:0000075,3.56e-12,7;CL:0000682,1.12e-10,3;CL:0002563,2.13e-09,9;CL:0002251,2.13e-09,9;CL:0000066,1.53e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.55e-24!43;UBERON:0000344!1.34e-19!15;UBERON:0005409!4.09e-18!59;UBERON:0001242!9.24e-17!13;UBERON:0000060!9.24e-17!13;UBERON:0001262!9.24e-17!13;UBERON:0004786!9.24e-17!13;UBERON:0004923!2.79e-12!24;UBERON:0003350!5.04e-11!9;UBERON:0004808!5.04e-11!9;UBERON:0001277!5.04e-11!9;UBERON:0000485!1.08e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.67e-51,31;UBERON:0005409,2.71e-32,47;UBERON:0000344,1.23e-24,15;UBERON:0001242,2.16e-19,13;UBERON:0001262,2.16e-19,13;UBERON:0004786,2.16e-19,13;UBERON:0004923,1.28e-14,24;UBERON:0001007,6.23e-13,116;UBERON:0001555,6.23e-13,116;UBERON:0007026,6.23e-13,116;UBERON:0002108,1.13e-12,4;UBERON:0004119,1.24e-12,118;UBERON:0000925,1.24e-12,118;UBERON:0006595,1.24e-12,118;UBERON:0004921,1.04e-10,114;UBERON:0000331,8.59e-10,3;UBERON:0002116,8.59e-10,3;UBERON:0001204,8.59e-10,3;UBERON:0001168,8.59e-10,3;UBERON:0003350,2.13e-09,9;UBERON:0004808,2.13e-09,9;UBERON:0001277,2.13e-09,9;UBERON:0000485,1.25e-07,11;UBERON:0001155,1.35e-07,2;UBERON:0000059,1.35e-07,2;UBERON:0001962,3.52e-07,2;UBERON:0001961,3.52e-07,2;UBERON:0001744,3.52e-07,2|phase1_expression=0,16.7508195666893,8.18998630901165,9.0739263392049,9.5170188689806,0.671517087647559,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63978026100879,2.75291137280604,6.31655160526522,5.1691439539089,4.74036711908956,3.80046838912748,4.03248207615889,1.99557459589774,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2080076683033,2.64450566663544,0,0,0,0.80673409849337,2.00140239460383,3.99473814836374,6.64340686162316,1.81168850196412,4.77536896720512,3.58121649674071,7.01870713628832,3.59527763461689,5.18731319699266,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0.952587382566147,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p1@2010010A06Rik}} | ||
|EntrezGene=100503117 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt= | |||
|association_with_transcript=22bp_to_NR_045394_5end | |||
|description=CAGE_peak_1_at_2010010A06Rik_5end | |||
|id=chr18:75456937..75456948,- | |||
|ontology_enrichment_celltype=CL:0002563!5.04e-11!9;CL:0002251!5.04e-11!9;CL:0000239!1.52e-10!6;CL:0000677!1.52e-10!6;CL:0000212!1.52e-10!6;CL:0000584!1.52e-10!6;CL:0000075!7.04e-09!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.98e-14,6;CL:0000677,2.98e-14,6;CL:0000584,2.98e-14,6;CL:0000075,3.56e-12,7;CL:0000682,1.12e-10,3;CL:0002563,2.13e-09,9;CL:0002251,2.13e-09,9;CL:0000066,1.53e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.55e-24!43;UBERON:0000344!1.34e-19!15;UBERON:0005409!4.09e-18!59;UBERON:0001242!9.24e-17!13;UBERON:0000060!9.24e-17!13;UBERON:0001262!9.24e-17!13;UBERON:0004786!9.24e-17!13;UBERON:0004923!2.79e-12!24;UBERON:0003350!5.04e-11!9;UBERON:0004808!5.04e-11!9;UBERON:0001277!5.04e-11!9;UBERON:0000485!1.08e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.67e-51,31;UBERON:0005409,2.71e-32,47;UBERON:0000344,1.23e-24,15;UBERON:0001242,2.16e-19,13;UBERON:0001262,2.16e-19,13;UBERON:0004786,2.16e-19,13;UBERON:0004923,1.28e-14,24;UBERON:0001007,6.23e-13,116;UBERON:0001555,6.23e-13,116;UBERON:0007026,6.23e-13,116;UBERON:0002108,1.13e-12,4;UBERON:0004119,1.24e-12,118;UBERON:0000925,1.24e-12,118;UBERON:0006595,1.24e-12,118;UBERON:0004921,1.04e-10,114;UBERON:0000331,8.59e-10,3;UBERON:0002116,8.59e-10,3;UBERON:0001204,8.59e-10,3;UBERON:0001168,8.59e-10,3;UBERON:0003350,2.13e-09,9;UBERON:0004808,2.13e-09,9;UBERON:0001277,2.13e-09,9;UBERON:0000485,1.25e-07,11;UBERON:0001155,1.35e-07,2;UBERON:0000059,1.35e-07,2;UBERON:0001962,3.52e-07,2;UBERON:0001961,3.52e-07,2;UBERON:0001744,3.52e-07,2 | |||
|phase1_expression=0,16.7508195666893,8.18998630901165,9.0739263392049,9.5170188689806,0.671517087647559,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63978026100879,2.75291137280604,6.31655160526522,5.1691439539089,4.74036711908956,3.80046838912748,4.03248207615889,1.99557459589774,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2080076683033,2.64450566663544,0,0,0,0.80673409849337,2.00140239460383,3.99473814836374,6.64340686162316,1.81168850196412,4.77536896720512,3.58121649674071,7.01870713628832,3.59527763461689,5.18731319699266,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0.952587382566147,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p1@2010010A06Rik | |||
}} |
Revision as of 16:45, 13 September 2013
Short description: | p1@2010010A06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2010010A06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 22bp_to_NR_045394_5end |
EntrezGene: | 2010010A06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.98e-14 | 6 |
gut absorptive cell | 2.98e-14 | 6 |
enterocyte | 2.98e-14 | 6 |
columnar/cuboidal epithelial cell | 3.56e-12 | 7 |
M cell of gut | 1.12e-10 | 3 |
intestinal epithelial cell | 2.13e-09 | 9 |
epithelial cell of alimentary canal | 2.13e-09 | 9 |
epithelial cell | 1.53e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.67e-51 | 31 |
gastrointestinal system | 2.71e-32 | 47 |
mucosa | 1.23e-24 | 15 |
intestinal mucosa | 2.16e-19 | 13 |
wall of intestine | 2.16e-19 | 13 |
gastrointestinal system mucosa | 2.16e-19 | 13 |
organ component layer | 1.28e-14 | 24 |
digestive system | 6.23e-13 | 116 |
digestive tract | 6.23e-13 | 116 |
primitive gut | 6.23e-13 | 116 |
small intestine | 1.13e-12 | 4 |
endoderm-derived structure | 1.24e-12 | 118 |
endoderm | 1.24e-12 | 118 |
presumptive endoderm | 1.24e-12 | 118 |
subdivision of digestive tract | 1.04e-10 | 114 |
ileal mucosa | 8.59e-10 | 3 |
ileum | 8.59e-10 | 3 |
mucosa of small intestine | 8.59e-10 | 3 |
wall of small intestine | 8.59e-10 | 3 |
epithelium of mucosa | 2.13e-09 | 9 |
gastrointestinal system epithelium | 2.13e-09 | 9 |
intestinal epithelium | 2.13e-09 | 9 |
simple columnar epithelium | 1.25e-07 | 11 |
colon | 1.35e-07 | 2 |
large intestine | 1.35e-07 | 2 |
gut-associated lymphoid tissue | 3.52e-07 | 2 |
mucosa-associated lymphoid tissue | 3.52e-07 | 2 |
lymphoid tissue | 3.52e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.