FFCP PHASE1:Mm9::chr18:64424726..64424741,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=90|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:64424726..64424741,+|id=chr18:64424726..64424741,+|ontology_enrichment_celltype=CL:0000540!3.46e-19!33;CL:0000047!3.46e-19!33;CL:0000031!3.46e-19!33;CL:0000404!3.46e-19!33;CL:0000117!4.34e-16!23;CL:0000337!4.34e-16!23;CL:0000393!6.05e-14!39;CL:0000211!6.05e-14!39;CL:0000221!2.71e-13!44;CL:0000133!2.71e-13!44;CL:0002319!1.16e-12!43;CL:0000055!5.54e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.26e-29,23;CL:0000337,6.26e-29,23;CL:0000540,7.42e-24,33;CL:0000047,7.42e-24,33;CL:0000031,7.42e-24,33;CL:0000404,7.42e-24,33;CL:0000393,5.28e-19,39;CL:0000211,5.28e-19,39;CL:0000221,1.31e-17,44;CL:0000133,1.31e-17,44;CL:0002319,1.55e-16,43;CL:0002321,2.51e-08,70;CL:0002609,3.25e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.80e-32!75;UBERON:0001016!8.80e-32!75;UBERON:0001017!1.07e-31!73;UBERON:0005743!1.07e-31!73;UBERON:0002346!5.25e-29!71;UBERON:0003075!5.25e-29!71;UBERON:0007284!5.25e-29!71;UBERON:0004121!9.20e-29!102;UBERON:0000924!9.20e-29!102;UBERON:0006601!9.20e-29!102;UBERON:0001049!9.53e-26!52;UBERON:0005068!9.53e-26!52;UBERON:0006241!9.53e-26!52;UBERON:0007135!9.53e-26!52;UBERON:0000033!6.25e-25!63;UBERON:0000955!4.25e-24!50;UBERON:0006238!4.25e-24!50;UBERON:0002616!1.78e-23!49;UBERON:0003056!4.93e-21!49;UBERON:0002020!7.64e-21!34;UBERON:0003080!1.97e-20!40;UBERON:0002780!9.21e-20!39;UBERON:0001890!9.21e-20!39;UBERON:0006240!9.21e-20!39;UBERON:0002791!5.40e-17!29;UBERON:0003528!5.40e-17!29;UBERON:0001893!5.40e-17!29;UBERON:0007811!1.65e-12!86;UBERON:0000956!2.00e-11!21;UBERON:0001869!2.00e-11!21;UBERON:0000203!2.00e-11!21;UBERON:0000153!1.08e-09!94;UBERON:0002619!3.68e-09!17;UBERON:0002021!3.82e-08!10;UBERON:0000411!3.82e-08!10;UBERON:0001950!3.82e-08!10;UBERON:0002420!6.65e-07!8;UBERON:0007245!6.65e-07!8;UBERON:0010009!6.65e-07!8;UBERON:0010011!6.65e-07!8;UBERON:0000454!6.65e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.92e-48,54;UBERON:0001017,4.95e-48,73;UBERON:0001016,2.24e-46,75;UBERON:0001049,5.68e-45,52;UBERON:0005068,5.68e-45,52;UBERON:0006241,5.68e-45,52;UBERON:0007135,5.68e-45,52;UBERON:0002346,2.00e-39,64;UBERON:0003075,2.00e-39,64;UBERON:0007284,2.00e-39,64;UBERON:0002020,2.73e-39,34;UBERON:0004121,1.94e-38,95;UBERON:0000924,1.94e-38,95;UBERON:0006601,1.94e-38,95;UBERON:0000955,1.59e-37,47;UBERON:0006238,1.59e-37,47;UBERON:0010371,4.45e-37,73;UBERON:0002616,2.18e-36,46;UBERON:0003080,9.65e-34,40;UBERON:0002780,1.69e-32,39;UBERON:0001890,1.69e-32,39;UBERON:0006240,1.69e-32,39;UBERON:0003528,5.94e-32,29;UBERON:0002791,5.94e-32,29;UBERON:0001893,5.94e-32,29;UBERON:0003056,4.58e-29,49;UBERON:0010314,1.07e-26,92;UBERON:0000956,2.39e-21,21;UBERON:0001869,2.39e-21,21;UBERON:0000203,2.39e-21,21;UBERON:0002619,4.70e-17,17;UBERON:0004111,2.66e-14,122;UBERON:0002021,5.97e-14,10;UBERON:0000411,5.97e-14,10;UBERON:0001950,5.97e-14,10;UBERON:0000025,6.24e-14,114;UBERON:0011216,5.98e-13,194;UBERON:0002420,1.26e-11,8;UBERON:0007245,1.26e-11,8;UBERON:0010009,1.26e-11,8;UBERON:0010011,1.26e-11,8;UBERON:0000454,1.26e-11,8;UBERON:0003076,6.47e-11,12;UBERON:0003057,6.47e-11,12;UBERON:0002240,2.40e-09,6;UBERON:0005174,2.40e-09,6;UBERON:0001137,2.40e-09,6;UBERON:0001948,2.53e-08,5;UBERON:0002315,2.53e-08,5;UBERON:0000483,4.03e-08,174;UBERON:0000369,4.38e-08,5;UBERON:0002435,4.38e-08,5;UBERON:0000204,4.38e-08,5;UBERON:0010082,4.38e-08,5;UBERON:0000119,6.83e-08,176|phase1_expression=13.1322054625931,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46254444320914,2.11596391708813,5.70448263155561,0,0,0,0,0,0,0,1.45165457231869,2.70011876663381,2.10324961351382,7.42692559449889,3.75476519617743,1.83736198822431,1.72521847832825,3.67687514644008,7.70811166995721,3.57524546638526,6.60508093001847,3.56092976871523,4.84884511092771,3.12548022334056,3.35019598801657,3.93933827022176,5.65353516774197,8.2496003932627,5.26775218956681,5.77838282058432,0.075726193333184,0.377857800533928,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,5.0703631119605,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.520455980298408,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0,0.144599356919912,0,0,0,0,0,4.39171195517321,2.72280718857492,0.255457055208591,0,0,0,3.74476598512057,40.2600530480391,12.5654352112864,6.43149984711423,6.90431734791892,7.68815764870372,9.08551073179443,0,0,0,0.210441855886474,0,0.459804208866946,1.0803727788321,0.30140963567143,0.340182495756639,0.384341160854549,0.374806898238915,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2527577368216,7.51203670368776,0,0,1.49301775374664,1.39342003116263,1.80414445850931,0.403367049246685,0.667134131534611,0,0,0,0,0.397912944082302,0.3899281742382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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:64424726..64424741,+ | |||
|id=chr18:64424726..64424741,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.46e-19!33;CL:0000047!3.46e-19!33;CL:0000031!3.46e-19!33;CL:0000404!3.46e-19!33;CL:0000117!4.34e-16!23;CL:0000337!4.34e-16!23;CL:0000393!6.05e-14!39;CL:0000211!6.05e-14!39;CL:0000221!2.71e-13!44;CL:0000133!2.71e-13!44;CL:0002319!1.16e-12!43;CL:0000055!5.54e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.26e-29,23;CL:0000337,6.26e-29,23;CL:0000540,7.42e-24,33;CL:0000047,7.42e-24,33;CL:0000031,7.42e-24,33;CL:0000404,7.42e-24,33;CL:0000393,5.28e-19,39;CL:0000211,5.28e-19,39;CL:0000221,1.31e-17,44;CL:0000133,1.31e-17,44;CL:0002319,1.55e-16,43;CL:0002321,2.51e-08,70;CL:0002609,3.25e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.80e-32!75;UBERON:0001016!8.80e-32!75;UBERON:0001017!1.07e-31!73;UBERON:0005743!1.07e-31!73;UBERON:0002346!5.25e-29!71;UBERON:0003075!5.25e-29!71;UBERON:0007284!5.25e-29!71;UBERON:0004121!9.20e-29!102;UBERON:0000924!9.20e-29!102;UBERON:0006601!9.20e-29!102;UBERON:0001049!9.53e-26!52;UBERON:0005068!9.53e-26!52;UBERON:0006241!9.53e-26!52;UBERON:0007135!9.53e-26!52;UBERON:0000033!6.25e-25!63;UBERON:0000955!4.25e-24!50;UBERON:0006238!4.25e-24!50;UBERON:0002616!1.78e-23!49;UBERON:0003056!4.93e-21!49;UBERON:0002020!7.64e-21!34;UBERON:0003080!1.97e-20!40;UBERON:0002780!9.21e-20!39;UBERON:0001890!9.21e-20!39;UBERON:0006240!9.21e-20!39;UBERON:0002791!5.40e-17!29;UBERON:0003528!5.40e-17!29;UBERON:0001893!5.40e-17!29;UBERON:0007811!1.65e-12!86;UBERON:0000956!2.00e-11!21;UBERON:0001869!2.00e-11!21;UBERON:0000203!2.00e-11!21;UBERON:0000153!1.08e-09!94;UBERON:0002619!3.68e-09!17;UBERON:0002021!3.82e-08!10;UBERON:0000411!3.82e-08!10;UBERON:0001950!3.82e-08!10;UBERON:0002420!6.65e-07!8;UBERON:0007245!6.65e-07!8;UBERON:0010009!6.65e-07!8;UBERON:0010011!6.65e-07!8;UBERON:0000454!6.65e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.92e-48,54;UBERON:0001017,4.95e-48,73;UBERON:0001016,2.24e-46,75;UBERON:0001049,5.68e-45,52;UBERON:0005068,5.68e-45,52;UBERON:0006241,5.68e-45,52;UBERON:0007135,5.68e-45,52;UBERON:0002346,2.00e-39,64;UBERON:0003075,2.00e-39,64;UBERON:0007284,2.00e-39,64;UBERON:0002020,2.73e-39,34;UBERON:0004121,1.94e-38,95;UBERON:0000924,1.94e-38,95;UBERON:0006601,1.94e-38,95;UBERON:0000955,1.59e-37,47;UBERON:0006238,1.59e-37,47;UBERON:0010371,4.45e-37,73;UBERON:0002616,2.18e-36,46;UBERON:0003080,9.65e-34,40;UBERON:0002780,1.69e-32,39;UBERON:0001890,1.69e-32,39;UBERON:0006240,1.69e-32,39;UBERON:0003528,5.94e-32,29;UBERON:0002791,5.94e-32,29;UBERON:0001893,5.94e-32,29;UBERON:0003056,4.58e-29,49;UBERON:0010314,1.07e-26,92;UBERON:0000956,2.39e-21,21;UBERON:0001869,2.39e-21,21;UBERON:0000203,2.39e-21,21;UBERON:0002619,4.70e-17,17;UBERON:0004111,2.66e-14,122;UBERON:0002021,5.97e-14,10;UBERON:0000411,5.97e-14,10;UBERON:0001950,5.97e-14,10;UBERON:0000025,6.24e-14,114;UBERON:0011216,5.98e-13,194;UBERON:0002420,1.26e-11,8;UBERON:0007245,1.26e-11,8;UBERON:0010009,1.26e-11,8;UBERON:0010011,1.26e-11,8;UBERON:0000454,1.26e-11,8;UBERON:0003076,6.47e-11,12;UBERON:0003057,6.47e-11,12;UBERON:0002240,2.40e-09,6;UBERON:0005174,2.40e-09,6;UBERON:0001137,2.40e-09,6;UBERON:0001948,2.53e-08,5;UBERON:0002315,2.53e-08,5;UBERON:0000483,4.03e-08,174;UBERON:0000369,4.38e-08,5;UBERON:0002435,4.38e-08,5;UBERON:0000204,4.38e-08,5;UBERON:0010082,4.38e-08,5;UBERON:0000119,6.83e-08,176 | |||
|phase1_expression=13.1322054625931,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46254444320914,2.11596391708813,5.70448263155561,0,0,0,0,0,0,0,1.45165457231869,2.70011876663381,2.10324961351382,7.42692559449889,3.75476519617743,1.83736198822431,1.72521847832825,3.67687514644008,7.70811166995721,3.57524546638526,6.60508093001847,3.56092976871523,4.84884511092771,3.12548022334056,3.35019598801657,3.93933827022176,5.65353516774197,8.2496003932627,5.26775218956681,5.77838282058432,0.075726193333184,0.377857800533928,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,5.0703631119605,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.520455980298408,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0,0.144599356919912,0,0,0,0,0,4.39171195517321,2.72280718857492,0.255457055208591,0,0,0,3.74476598512057,40.2600530480391,12.5654352112864,6.43149984711423,6.90431734791892,7.68815764870372,9.08551073179443,0,0,0,0.210441855886474,0,0.459804208866946,1.0803727788321,0.30140963567143,0.340182495756639,0.384341160854549,0.374806898238915,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2527577368216,7.51203670368776,0,0,1.49301775374664,1.39342003116263,1.80414445850931,0.403367049246685,0.667134131534611,0,0,0,0,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.899448449539415,0.405720242777006,0.241177159752417,0,0,0.324270453550071,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,2.34423373184406,0,0,0.631016438832513,1.17131623288992,0.430846795465598,0.238968797952552,0.668396022247182,0.566153061577665,0.809621403349789,2.04579100537918,0.790575555893047,2.57057053137446,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,6.46835250932197,0.18006109403131,0.258717367565509,0.643011105094777,2.48276327099183,1.42695054081656,0.493647061806363,0,0,0,0.220528398054962,0,0,0,0,0,0,3.15223013417866,0,0,0.185194527369712,0,0,0,0,0,0,0,0.949007980743406,0.609958401380546,1.18805874903981,0,0,0.404593039154462,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90652579663893,5.9842280745933,4.58316410751517,5.67115501734169,2.05524755931193,3.7769694869485,4.72515750162264,6.75481804836331,3.17199686288943,4.14208249401456,0.62272408550506,0.798049746802062,0.512200817262403,0.486213434136588,0.838452650511929,0.919217542250071,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,0.760437899670719,0.943131706930381,0.842773567228942,0.768301828858431,1.26358031702349,0.476293691283074,0.927074607558844,0.77163688185482,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,0.715308569841963,0.290692833264657,0.282328141245992,0.676916863133412,0.365855945745545,0.263069711437843,0.950628796921032,1.12228454331548,0.355905054372522,0.29551344712669,0,0.929621047115796,0.964533054905707,0.499621155875892,0.701794825336225,1.07435527024149,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p@chr18:64424726..64424741,+ | |||
}} |
Revision as of 16:33, 13 September 2013
Short description: | p@chr18:64424726..64424741, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:64424726..64424741, + |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.26e-29 | 23 |
neuroblast (sensu Vertebrata) | 6.26e-29 | 23 |
neuron | 7.42e-24 | 33 |
neuronal stem cell | 7.42e-24 | 33 |
neuroblast | 7.42e-24 | 33 |
electrically signaling cell | 7.42e-24 | 33 |
electrically responsive cell | 5.28e-19 | 39 |
electrically active cell | 5.28e-19 | 39 |
ectodermal cell | 1.31e-17 | 44 |
neurectodermal cell | 1.31e-17 | 44 |
neural cell | 1.55e-16 | 43 |
embryonic cell | 2.51e-08 | 70 |
neuron of cerebral cortex | 3.25e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.