FFCP PHASE1:Mm9::chr17:44271762..44271771,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:44271762..44271771,+|id=chr17:44271762..44271771,+|ontology_enrichment_celltype=CL:0000239!2.26e-09!6;CL:0000677!2.26e-09!6;CL:0000212!2.26e-09!6;CL:0000584!2.26e-09!6;CL:0000075!7.49e-08!7;CL:0002563!1.06e-07!9;CL:0002251!1.06e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,6.06e-18,6;CL:0000677,6.06e-18,6;CL:0000584,6.06e-18,6;CL:0000075,2.73e-15,7;CL:0002563,9.54e-12,9;CL:0002251,9.54e-12,9;CL:0000682,1.59e-09,3;CL:0000066,2.65e-08,25;CL:0002076,8.87e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.41e-22!43;UBERON:0005409!3.60e-18!59;UBERON:0000344!2.59e-15!15;UBERON:0001242!8.46e-13!13;UBERON:0000060!8.46e-13!13;UBERON:0001262!8.46e-13!13;UBERON:0004786!8.46e-13!13;UBERON:0001007!1.89e-09!128;UBERON:0001555!1.89e-09!128;UBERON:0007026!1.89e-09!128;UBERON:0004119!4.03e-09!130;UBERON:0000925!4.03e-09!130;UBERON:0006595!4.03e-09!130;UBERON:0004921!3.16e-08!126;UBERON:0004185!3.16e-08!126;UBERON:0004923!4.43e-08!24;UBERON:0003350!1.06e-07!9;UBERON:0004808!1.06e-07!9;UBERON:0001277!1.06e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.06e-55,31;UBERON:0005409,1.47e-34,47;UBERON:0000344,3.23e-27,15;UBERON:0001242,4.88e-22,13;UBERON:0001262,4.88e-22,13;UBERON:0004786,4.88e-22,13;UBERON:0004923,4.50e-16,24;UBERON:0001007,1.76e-13,116;UBERON:0001555,1.76e-13,116;UBERON:0007026,1.76e-13,116;UBERON:0004119,3.67e-13,118;UBERON:0000925,3.67e-13,118;UBERON:0006595,3.67e-13,118;UBERON:0002108,1.56e-12,4;UBERON:0003350,9.54e-12,9;UBERON:0004808,9.54e-12,9;UBERON:0001277,9.54e-12,9;UBERON:0004921,2.91e-11,114;UBERON:0000331,8.11e-10,3;UBERON:0002116,8.11e-10,3;UBERON:0001204,8.11e-10,3;UBERON:0001168,8.11e-10,3;UBERON:0000485,1.73e-09,11;UBERON:0001962,6.49e-07,2;UBERON:0001961,6.49e-07,2;UBERON:0001744,6.49e-07,2;UBERON:0001155,6.94e-07,2;UBERON:0000059,6.94e-07,2|phase1_expression=0,4.88565570695105,4.09499315450582,8.77146212789807,9.5170188689806,1.6787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,2.06468352960453,2.8711598205751,3.01533397311352,3.23206849028834,11.7814520062952,6.5527833737582,1.55211357458713,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,2.90895623329899,0,0.232236671860439,0.644337306610467,1.81515172161008,3.11329261382818,1.33157938278791,1.89811624617805,3.12928013975621,1.25667604400135,1.79060824837036,1.75467678407208,8.08937467788799,1.94524244887225,3.18626037206988,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.295220295959204,0.470996183524124,0.246794327843601,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0.37456602987953,0.128050304809739,0.229741875822453,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr17:44271762..44271771,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:44271762..44271771,+ | |||
|id=chr17:44271762..44271771,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.26e-09!6;CL:0000677!2.26e-09!6;CL:0000212!2.26e-09!6;CL:0000584!2.26e-09!6;CL:0000075!7.49e-08!7;CL:0002563!1.06e-07!9;CL:0002251!1.06e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.06e-18,6;CL:0000677,6.06e-18,6;CL:0000584,6.06e-18,6;CL:0000075,2.73e-15,7;CL:0002563,9.54e-12,9;CL:0002251,9.54e-12,9;CL:0000682,1.59e-09,3;CL:0000066,2.65e-08,25;CL:0002076,8.87e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.41e-22!43;UBERON:0005409!3.60e-18!59;UBERON:0000344!2.59e-15!15;UBERON:0001242!8.46e-13!13;UBERON:0000060!8.46e-13!13;UBERON:0001262!8.46e-13!13;UBERON:0004786!8.46e-13!13;UBERON:0001007!1.89e-09!128;UBERON:0001555!1.89e-09!128;UBERON:0007026!1.89e-09!128;UBERON:0004119!4.03e-09!130;UBERON:0000925!4.03e-09!130;UBERON:0006595!4.03e-09!130;UBERON:0004921!3.16e-08!126;UBERON:0004185!3.16e-08!126;UBERON:0004923!4.43e-08!24;UBERON:0003350!1.06e-07!9;UBERON:0004808!1.06e-07!9;UBERON:0001277!1.06e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.06e-55,31;UBERON:0005409,1.47e-34,47;UBERON:0000344,3.23e-27,15;UBERON:0001242,4.88e-22,13;UBERON:0001262,4.88e-22,13;UBERON:0004786,4.88e-22,13;UBERON:0004923,4.50e-16,24;UBERON:0001007,1.76e-13,116;UBERON:0001555,1.76e-13,116;UBERON:0007026,1.76e-13,116;UBERON:0004119,3.67e-13,118;UBERON:0000925,3.67e-13,118;UBERON:0006595,3.67e-13,118;UBERON:0002108,1.56e-12,4;UBERON:0003350,9.54e-12,9;UBERON:0004808,9.54e-12,9;UBERON:0001277,9.54e-12,9;UBERON:0004921,2.91e-11,114;UBERON:0000331,8.11e-10,3;UBERON:0002116,8.11e-10,3;UBERON:0001204,8.11e-10,3;UBERON:0001168,8.11e-10,3;UBERON:0000485,1.73e-09,11;UBERON:0001962,6.49e-07,2;UBERON:0001961,6.49e-07,2;UBERON:0001744,6.49e-07,2;UBERON:0001155,6.94e-07,2;UBERON:0000059,6.94e-07,2 | |||
|phase1_expression=0,4.88565570695105,4.09499315450582,8.77146212789807,9.5170188689806,1.6787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,2.06468352960453,2.8711598205751,3.01533397311352,3.23206849028834,11.7814520062952,6.5527833737582,1.55211357458713,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,2.90895623329899,0,0.232236671860439,0.644337306610467,1.81515172161008,3.11329261382818,1.33157938278791,1.89811624617805,3.12928013975621,1.25667604400135,1.79060824837036,1.75467678407208,8.08937467788799,1.94524244887225,3.18626037206988,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.295220295959204,0.470996183524124,0.246794327843601,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0.37456602987953,0.128050304809739,0.229741875822453,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr17:44271762..44271771,+ | |||
}} |
Revision as of 14:35, 13 September 2013
Short description: | p@chr17:44271762..44271771, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:44271762..44271771, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.06e-18 | 6 |
gut absorptive cell | 6.06e-18 | 6 |
enterocyte | 6.06e-18 | 6 |
columnar/cuboidal epithelial cell | 2.73e-15 | 7 |
intestinal epithelial cell | 9.54e-12 | 9 |
epithelial cell of alimentary canal | 9.54e-12 | 9 |
M cell of gut | 1.59e-09 | 3 |
epithelial cell | 2.65e-08 | 25 |
endo-epithelial cell | 8.87e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.06e-55 | 31 |
gastrointestinal system | 1.47e-34 | 47 |
mucosa | 3.23e-27 | 15 |
intestinal mucosa | 4.88e-22 | 13 |
wall of intestine | 4.88e-22 | 13 |
gastrointestinal system mucosa | 4.88e-22 | 13 |
organ component layer | 4.50e-16 | 24 |
digestive system | 1.76e-13 | 116 |
digestive tract | 1.76e-13 | 116 |
primitive gut | 1.76e-13 | 116 |
endoderm-derived structure | 3.67e-13 | 118 |
endoderm | 3.67e-13 | 118 |
presumptive endoderm | 3.67e-13 | 118 |
small intestine | 1.56e-12 | 4 |
epithelium of mucosa | 9.54e-12 | 9 |
gastrointestinal system epithelium | 9.54e-12 | 9 |
intestinal epithelium | 9.54e-12 | 9 |
subdivision of digestive tract | 2.91e-11 | 114 |
ileal mucosa | 8.11e-10 | 3 |
ileum | 8.11e-10 | 3 |
mucosa of small intestine | 8.11e-10 | 3 |
wall of small intestine | 8.11e-10 | 3 |
simple columnar epithelium | 1.73e-09 | 11 |
gut-associated lymphoid tissue | 6.49e-07 | 2 |
mucosa-associated lymphoid tissue | 6.49e-07 | 2 |
lymphoid tissue | 6.49e-07 | 2 |
colon | 6.94e-07 | 2 |
large intestine | 6.94e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.