FFCP PHASE1:Hg19::chr5:161275320..161275386,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2554|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4075|TSSclassifier=W|UniProt=P14867|association_with_transcript=-63bp_to_ENST00000437025_5end|coexpression_cluster_id=C3|description=CAGE_peak_2_at_GABRA1_5end|id=chr5:161275320..161275386,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;4.35e-22;82!UBERON:0006215;4.53e-13;3!UBERON:0010122;3.99e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.09e-87!57;UBERON:0005068!8.09e-87!57;UBERON:0006241!8.09e-87!57;UBERON:0007135!8.09e-87!57;UBERON:0005743!3.73e-78!86;UBERON:0000073!7.28e-78!94;UBERON:0001016!7.28e-78!94;UBERON:0002616!5.18e-76!59;UBERON:0001017!2.22e-73!82;UBERON:0000955!4.32e-72!69;UBERON:0006238!4.32e-72!69;UBERON:0002780!1.31e-69!41;UBERON:0001890!1.31e-69!41;UBERON:0006240!1.31e-69!41;UBERON:0003080!9.66e-68!42;UBERON:0003075!6.26e-67!86;UBERON:0007284!6.26e-67!86;UBERON:0002346!2.33e-63!90;UBERON:0001893!5.22e-62!34;UBERON:0002020!6.53e-62!34;UBERON:0003528!6.53e-62!34;UBERON:0001869!7.87e-62!32;UBERON:0002791!1.89e-59!33;UBERON:0007023!1.99e-58!115;UBERON:0002619!2.40e-52!22;UBERON:0003056!5.82e-52!61;UBERON:0000153!2.67e-49!129;UBERON:0007811!2.67e-49!129;UBERON:0001950!1.23e-47!20;UBERON:0000033!2.80e-46!123;UBERON:0000956!1.59e-45!25;UBERON:0000203!1.59e-45!25;UBERON:0004121!2.95e-40!169;UBERON:0000924!5.50e-39!173;UBERON:0006601!5.50e-39!173;UBERON:0000025!9.85e-20!194;UBERON:0003076!2.89e-19!15;UBERON:0003057!2.89e-19!15;UBERON:0004732!8.99e-19!13;UBERON:0002420!1.44e-17!9;UBERON:0007245!1.44e-17!9;UBERON:0010009!1.44e-17!9;UBERON:0010011!1.44e-17!9;UBERON:0000454!1.44e-17!9;UBERON:0002308!1.88e-17!9;UBERON:0000125!1.88e-17!9;UBERON:0000200!8.91e-17!6;UBERON:0004733!9.25e-17!12;UBERON:0002028!9.25e-17!12;UBERON:0007277!9.25e-17!12;UBERON:0001871!7.94e-16!7;UBERON:0004111!5.29e-15!241;UBERON:0000477!2.66e-14!286;UBERON:0001872!9.15e-14!5;UBERON:0002021!9.15e-14!5;UBERON:0000483!9.63e-14!309;UBERON:0000349!1.66e-13!5;UBERON:0000119!1.79e-13!312;UBERON:0000064!3.78e-13!219;UBERON:0009663!6.40e-13!7;UBERON:0000475!1.11e-12!365;UBERON:0002298!3.50e-11!8;UBERON:0000369!7.13e-11!4;UBERON:0002435!7.13e-11!4;UBERON:0000204!7.13e-11!4;UBERON:0010082!7.13e-11!4;UBERON:0002680!9.97e-11!9;UBERON:0001895!9.97e-11!9;UBERON:0010092!9.97e-11!9;UBERON:0001894!4.06e-09!7;UBERON:0006222!4.06e-09!7;UBERON:0002771!4.24e-09!3;UBERON:0000988!1.15e-08!3;UBERON:0005383!1.96e-08!3;UBERON:0005382!1.96e-08!3;UBERON:0001896!3.42e-08!3;UBERON:0005290!3.42e-08!3;UBERON:0010096!3.42e-08!3;UBERON:0000481!4.97e-08!347;UBERON:0000922!1.84e-07!612;UBERON:0000062!3.26e-07!511;UBERON:0001870!6.63e-07!2|ontology_enrichment_uberon_v019=UBERON:0002619;9.92e-69;22!UBERON:0001869;1.08e-68;32!UBERON:0003528;2.44e-68;34!UBERON:0002020;2.44e-68;34!UBERON:0001893;7.26e-67;34!UBERON:0002791;7.23e-64;32!UBERON:0001950;5.69e-62;20!UBERON:0000956;3.71e-60;25!UBERON:0000203;3.71e-60;25!UBERON:0000073;3.77e-58;53!UBERON:0002616;3.77e-58;53!UBERON:0002780;8.51e-58;41!UBERON:0001890;8.51e-58;41!UBERON:0000955;7.78e-40;68!UBERON:0001017;8.16e-37;75!UBERON:0001016;5.71e-29;83!UBERON:0004732;8.69e-27;13!UBERON:0004733;6.93e-24;12!UBERON:0002028;6.93e-24;12!UBERON:0000200;2.10e-23;6!UBERON:0002298;3.98e-21;6!UBERON:0007023;9.93e-20;114!UBERON:0002420;2.73e-19;9!UBERON:0007245;2.73e-19;9!UBERON:0010009;2.73e-19;9!UBERON:0010011;2.73e-19;9!UBERON:0000454;2.73e-19;9!UBERON:0002021;3.74e-19;5!UBERON:0001872;3.81e-19;5!UBERON:0000125;3.99e-19;9!UBERON:0002308;3.99e-19;9!UBERON:0000349;9.69e-19;5!UBERON:0002680;3.79e-15;9!UBERON:0001895;3.79e-15;9!UBERON:0000369;6.20e-15;4!UBERON:0002435;6.20e-15;4!UBERON:0000204;6.20e-15;4!UBERON:0001871;1.27e-13;6!UBERON:0009663;6.18e-13;7!UBERON:0001870;8.79e-13;3!UBERON:0000988;9.21e-12;3!UBERON:0011216;1.52e-11;132!UBERON:0005383;1.99e-11;3!UBERON:0005382;1.99e-11;3!UBERON:0001896;4.17e-11;3!UBERON:0005290;4.17e-11;3!UBERON:0010314;7.61e-10;132!UBERON:0002702;4.71e-09;2!UBERON:0002771;7.79e-09;2!UBERON:0002784;9.15e-09;4!UBERON:0001894;1.35e-08;7!UBERON:0001876;1.35e-08;2!UBERON:0002148;2.25e-08;2!UBERON:0006331;2.25e-08;2!UBERON:0009662;2.25e-08;2!UBERON:0001954;2.42e-08;2!UBERON:0003022;2.42e-08;2!UBERON:0002421;2.42e-08;2!UBERON:0002600;2.42e-08;2!UBERON:0001873;3.99e-08;2!UBERON:0001905;4.37e-08;2!UBERON:0002757;4.37e-08;2!UBERON:0010134;4.37e-08;2!UBERON:0005408;4.37e-08;2!UBERON:0001899;4.37e-08;2!UBERON:0005162;7.38e-08;2!UBERON:0000122;7.38e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.45e-113,56;UBERON:0005068,7.45e-113,56;UBERON:0006241,7.45e-113,56;UBERON:0007135,7.45e-113,56;UBERON:0000073,1.07e-108,53;UBERON:0002616,1.07e-108,53;UBERON:0000955,1.03e-90,68;UBERON:0006238,1.03e-90,68;UBERON:0001017,1.61e-86,81;UBERON:0002780,1.24e-84,41;UBERON:0001890,1.24e-84,41;UBERON:00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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4075 | |||
|TSSclassifier=W | |||
|UniProt=P14867 | |||
|association_with_transcript=-63bp_to_ENST00000437025_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GABRA1_5end | |||
|id=chr5:161275320..161275386,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.35e-22;82!UBERON:0006215;4.53e-13;3!UBERON:0010122;3.99e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@GABRA1 | |||
}} |
Revision as of 14:33, 13 September 2013
Short description: | p2@GABRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GABRA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -63bp_to_ENST00000437025_5end |
EntrezGene: | GABRA1 |
HGNC: | 4075 |
UniProt: | P14867 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.