FFCP PHASE1:Hg19::chr4:77560669..77560712,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:77560669..77560712,+|id=chr4:77560669..77560712,+|ontology_enrichment_celltype=CL:0002620!2.34e-16!23;CL:0000057!1.61e-14!75;CL:0000055!3.28e-11!180;CL:0002556!2.21e-07!6|ontology_enrichment_celltype_v019=CL:0002620;4.14e-15;23!CL:0002556;3.06e-11;6!CL:0002551;2.23e-07;6!CL:0002540;5.19e-07;6|ontology_enrichment_celltype_v019_2=CL:0002620,4.09e-15,23;CL:0000057,4.95e-11,76;CL:0002556,5.14e-11,6;CL:0002551,1.73e-07,6;CL:0002540,4.51e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.24e-22!95;UBERON:0000078!4.70e-17!18;UBERON:0000165!2.36e-16!28;UBERON:0000930!2.36e-16!28;UBERON:0002097!2.28e-13!40;UBERON:0000166!7.78e-12!21;UBERON:0000475!5.48e-11!365;UBERON:0001444!5.65e-11!48;UBERON:0002199!8.02e-11!45;UBERON:0002416!8.02e-11!45;UBERON:0000075!3.61e-09!13;UBERON:0005944!3.61e-09!13;UBERON:0004288!3.61e-09!13;UBERON:0003089!3.61e-09!13;UBERON:0001004!5.85e-08!72;UBERON:0000467!1.32e-07!625;UBERON:0000161!1.42e-07!35;UBERON:0000480!1.61e-07!626;UBERON:0001758!2.21e-07!6;UBERON:0003672!2.21e-07!6;UBERON:0000468!3.38e-07!659;UBERON:0003129!3.70e-07!11;UBERON:0001044!5.00e-07!6;UBERON:0003293!5.00e-07!6;UBERON:0003294!5.00e-07!6;UBERON:0010047!5.00e-07!6;UBERON:0000167!5.00e-07!6|ontology_enrichment_uberon_v019=UBERON:0000165;5.22e-23;28!UBERON:0000075;1.34e-18;16!UBERON:0000161;1.12e-12;19!UBERON:0000166;1.12e-12;19!UBERON:0001434;3.46e-12;36!UBERON:0011137;1.93e-11;11!UBERON:0010323;1.93e-11;11!UBERON:0001758;3.06e-11;6!UBERON:0003672;3.06e-11;6!UBERON:0002097;1.07e-10;41!UBERON:0001044;1.83e-10;6!UBERON:0003293;1.83e-10;6!UBERON:0003294;1.83e-10;6!UBERON:0010047;1.83e-10;6!UBERON:0003408;1.83e-10;6!UBERON:0000167;1.83e-10;6!UBERON:0001444;2.63e-10;48!UBERON:0007811;4.18e-10;52!UBERON:0000033;1.52e-09;50!UBERON:0004765;1.55e-09;26!UBERON:0003129;1.75e-09;7!UBERON:0002199;2.43e-09;46!UBERON:0002416;2.43e-09;46!UBERON:0000153;2.72e-09;54!UBERON:0011135;4.81e-09;5!UBERON:0002216;4.81e-09;5!UBERON:0011134;4.81e-09;5!UBERON:0002209;4.81e-09;5!UBERON:0002213;4.81e-09;5!UBERON:0007844;4.81e-09;5!UBERON:0011138;4.81e-09;5!UBERON:0001130;4.81e-09;5!UBERON:0001066;4.81e-09;5!UBERON:0001468;4.81e-09;5!UBERON:0003102;1.29e-08;50!UBERON:0001828;5.00e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.85e-28,99;UBERON:0000165,5.27e-24,29;UBERON:0000930,5.27e-24,29;UBERON:0000075,1.65e-18,16;UBERON:0000166,1.72e-16,22;UBERON:0000033,7.73e-16,56;UBERON:0011137,3.70e-15,14;UBERON:0001444,3.83e-15,49;UBERON:0000153,6.68e-15,62;UBERON:0007811,6.68e-15,62;UBERON:0002097,1.61e-13,41;UBERON:0002199,2.16e-11,46;UBERON:0002416,2.16e-11,46;UBERON:0010323,2.95e-11,11;UBERON:0001758,5.14e-11,6;UBERON:0003672,5.14e-11,6;UBERON:0001044,1.93e-10,6;UBERON:0003293,1.93e-10,6;UBERON:0003294,1.93e-10,6;UBERON:0010047,1.93e-10,6;UBERON:0000167,1.93e-10,6;UBERON:0000161,1.68e-09,36;UBERON:0003129,2.71e-09,7;UBERON:0011135,3.53e-09,5;UBERON:0002216,3.53e-09,5;UBERON:0011134,3.53e-09,5;UBERON:0002209,3.53e-09,5;UBERON:0002213,3.53e-09,5;UBERON:0005856,3.53e-09,5;UBERON:0005866,3.53e-09,5;UBERON:0005863,3.53e-09,5;UBERON:0007844,3.53e-09,5;UBERON:0011138,3.53e-09,5;UBERON:0001130,3.53e-09,5;UBERON:0001066,3.53e-09,5;UBERON:0001468,3.53e-09,5;UBERON:0001004,2.10e-07,74;UBERON:0001828,4.20e-07,8|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,12.0053362371245,8.28493439319789,0,0,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,1.50602959389125,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06014813338393,1.00267582127178,4.92478164466801,0,0.486634870302636,0.189069634328136,0,0,0,2.18577172975525,1.11235332835329,0,0,0,0,0,0,0.39752481473341,0.860234595106124,3.81854551768354,0.56530794192401,5.03399323451887,0,1.8809546988313,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0,4.0507097394088,4.37568668591991,2.2452937262617,0.900891843866578,0,0,0,0,0,0.872188104285069,0,0.379891534993739,0.132409180813219,0.286836620748814,0.709336764396714,1.68203280042692,0,0,0,0,0.163461903113459,0,0,0,4.68240115245481,3.4228309292667,6.57574194427925,0.587172493218824,2.75184005425824,2.66856532734272,5.10385428137233,21.2503368949359,1.54988671763648,0,0.989067717114227,0,0,22.893711497753,18.1421853814348,1.10825646193673,10.0964852802593,6.43624371177941,3.00476117813194,0.113432183160021,4.66413052791041,0.427114777637135,0.211931901159562,3.30100205692843,0.515262646192195,2.57640540045629,0.37223371266318,6.91982962189192,1.36411807225678,3.2816390651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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:77560669..77560712,+ | |||
|id=chr4:77560669..77560712,+ | |||
|ontology_enrichment_celltype=CL:0002620!2.34e-16!23;CL:0000057!1.61e-14!75;CL:0000055!3.28e-11!180;CL:0002556!2.21e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.14e-15;23!CL:0002556;3.06e-11;6!CL:0002551;2.23e-07;6!CL:0002540;5.19e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.09e-15,23;CL:0000057,4.95e-11,76;CL:0002556,5.14e-11,6;CL:0002551,1.73e-07,6;CL:0002540,4.51e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.24e-22!95;UBERON:0000078!4.70e-17!18;UBERON:0000165!2.36e-16!28;UBERON:0000930!2.36e-16!28;UBERON:0002097!2.28e-13!40;UBERON:0000166!7.78e-12!21;UBERON:0000475!5.48e-11!365;UBERON:0001444!5.65e-11!48;UBERON:0002199!8.02e-11!45;UBERON:0002416!8.02e-11!45;UBERON:0000075!3.61e-09!13;UBERON:0005944!3.61e-09!13;UBERON:0004288!3.61e-09!13;UBERON:0003089!3.61e-09!13;UBERON:0001004!5.85e-08!72;UBERON:0000467!1.32e-07!625;UBERON:0000161!1.42e-07!35;UBERON:0000480!1.61e-07!626;UBERON:0001758!2.21e-07!6;UBERON:0003672!2.21e-07!6;UBERON:0000468!3.38e-07!659;UBERON:0003129!3.70e-07!11;UBERON:0001044!5.00e-07!6;UBERON:0003293!5.00e-07!6;UBERON:0003294!5.00e-07!6;UBERON:0010047!5.00e-07!6;UBERON:0000167!5.00e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.22e-23;28!UBERON:0000075;1.34e-18;16!UBERON:0000161;1.12e-12;19!UBERON:0000166;1.12e-12;19!UBERON:0001434;3.46e-12;36!UBERON:0011137;1.93e-11;11!UBERON:0010323;1.93e-11;11!UBERON:0001758;3.06e-11;6!UBERON:0003672;3.06e-11;6!UBERON:0002097;1.07e-10;41!UBERON:0001044;1.83e-10;6!UBERON:0003293;1.83e-10;6!UBERON:0003294;1.83e-10;6!UBERON:0010047;1.83e-10;6!UBERON:0003408;1.83e-10;6!UBERON:0000167;1.83e-10;6!UBERON:0001444;2.63e-10;48!UBERON:0007811;4.18e-10;52!UBERON:0000033;1.52e-09;50!UBERON:0004765;1.55e-09;26!UBERON:0003129;1.75e-09;7!UBERON:0002199;2.43e-09;46!UBERON:0002416;2.43e-09;46!UBERON:0000153;2.72e-09;54!UBERON:0011135;4.81e-09;5!UBERON:0002216;4.81e-09;5!UBERON:0011134;4.81e-09;5!UBERON:0002209;4.81e-09;5!UBERON:0002213;4.81e-09;5!UBERON:0007844;4.81e-09;5!UBERON:0011138;4.81e-09;5!UBERON:0001130;4.81e-09;5!UBERON:0001066;4.81e-09;5!UBERON:0001468;4.81e-09;5!UBERON:0003102;1.29e-08;50!UBERON:0001828;5.00e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.85e-28,99;UBERON:0000165,5.27e-24,29;UBERON:0000930,5.27e-24,29;UBERON:0000075,1.65e-18,16;UBERON:0000166,1.72e-16,22;UBERON:0000033,7.73e-16,56;UBERON:0011137,3.70e-15,14;UBERON:0001444,3.83e-15,49;UBERON:0000153,6.68e-15,62;UBERON:0007811,6.68e-15,62;UBERON:0002097,1.61e-13,41;UBERON:0002199,2.16e-11,46;UBERON:0002416,2.16e-11,46;UBERON:0010323,2.95e-11,11;UBERON:0001758,5.14e-11,6;UBERON:0003672,5.14e-11,6;UBERON:0001044,1.93e-10,6;UBERON:0003293,1.93e-10,6;UBERON:0003294,1.93e-10,6;UBERON:0010047,1.93e-10,6;UBERON:0000167,1.93e-10,6;UBERON:0000161,1.68e-09,36;UBERON:0003129,2.71e-09,7;UBERON:0011135,3.53e-09,5;UBERON:0002216,3.53e-09,5;UBERON:0011134,3.53e-09,5;UBERON:0002209,3.53e-09,5;UBERON:0002213,3.53e-09,5;UBERON:0005856,3.53e-09,5;UBERON:0005866,3.53e-09,5;UBERON:0005863,3.53e-09,5;UBERON:0007844,3.53e-09,5;UBERON:0011138,3.53e-09,5;UBERON:0001130,3.53e-09,5;UBERON:0001066,3.53e-09,5;UBERON:0001468,3.53e-09,5;UBERON:0001004,2.10e-07,74;UBERON:0001828,4.20e-07,8 | |||
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| |||
|short_description=p@chr4:77560669..77560712,+ | |||
}} |
Revision as of 11:48, 13 September 2013
Short description: | p@chr4:77560669..77560712, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:77560669..77560712, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.09e-15 | 23 |
fibroblast | 4.95e-11 | 76 |
fibroblast of periodontium | 5.14e-11 | 6 |
fibroblast of dermis | 1.73e-07 | 6 |
mesenchymal stem cell of the bone marrow | 4.51e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.