FFCP PHASE1:Hg19::chr3:68053424..68053452,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=407738|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21587|TSSclassifier=S|UniProt=|association_with_transcript=-1bp_to_uc003dne.2_5end|coexpression_cluster_id=C10|description=CAGE_peak_2_at_FAM19A1_5end|id=chr3:68053424..68053452,+|ontology_enrichment_celltype=CL:0000047!1.54e-07!8|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000047,1.09e-07,8|ontology_enrichment_development_v019=UBERON:0006601;2.97e-15;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.54e-83!82;UBERON:0005743!6.10e-82!86;UBERON:0001049!1.17e-79!57;UBERON:0005068!1.17e-79!57;UBERON:0006241!1.17e-79!57;UBERON:0007135!1.17e-79!57;UBERON:0000073!6.58e-73!94;UBERON:0001016!6.58e-73!94;UBERON:0000955!2.55e-66!69;UBERON:0006238!2.55e-66!69;UBERON:0002616!5.67e-66!59;UBERON:0002780!7.43e-64!41;UBERON:0001890!7.43e-64!41;UBERON:0006240!7.43e-64!41;UBERON:0003080!3.96e-62!42;UBERON:0001893!2.54e-61!34;UBERON:0002020!2.71e-61!34;UBERON:0003528!2.71e-61!34;UBERON:0002791!6.63e-59!33;UBERON:0003075!1.10e-58!86;UBERON:0007284!1.10e-58!86;UBERON:0001869!2.66e-57!32;UBERON:0002346!1.69e-55!90;UBERON:0007023!4.78e-55!115;UBERON:0002619!1.85e-53!22;UBERON:0000956!1.56e-50!25;UBERON:0000203!1.56e-50!25;UBERON:0001950!1.48e-48!20;UBERON:0003056!7.39e-45!61;UBERON:0004121!4.52e-39!169;UBERON:0000153!4.24e-38!129;UBERON:0007811!4.24e-38!129;UBERON:0000924!7.93e-38!173;UBERON:0006601!7.93e-38!173;UBERON:0000033!4.63e-37!123;UBERON:0003076!7.56e-18!15;UBERON:0003057!7.56e-18!15;UBERON:0000025!9.95e-17!194;UBERON:0001871!1.91e-16!7;UBERON:0000200!2.19e-16!6;UBERON:0002298!1.04e-14!8;UBERON:0001872!4.72e-14!5;UBERON:0002021!5.98e-14!5;UBERON:0000349!1.01e-13!5;UBERON:0004111!1.85e-13!241;UBERON:0002420!8.90e-13!9;UBERON:0007245!8.90e-13!9;UBERON:0010009!8.90e-13!9;UBERON:0010011!8.90e-13!9;UBERON:0000454!8.90e-13!9;UBERON:0002308!2.23e-12!9;UBERON:0000125!2.23e-12!9;UBERON:0004733!4.39e-12!12;UBERON:0002028!4.39e-12!12;UBERON:0007277!4.39e-12!12;UBERON:0000475!2.02e-11!365;UBERON:0000064!4.35e-11!219;UBERON:0004732!4.84e-11!13;UBERON:0000483!7.71e-11!309;UBERON:0000119!1.31e-10!312;UBERON:0000477!4.19e-10!286;UBERON:0000369!5.06e-10!4;UBERON:0002435!5.06e-10!4;UBERON:0000204!5.06e-10!4;UBERON:0010082!5.06e-10!4;UBERON:0002771!4.47e-09!3;UBERON:0000988!1.44e-08!3;UBERON:0009663!2.20e-08!7;UBERON:0001896!2.99e-08!3;UBERON:0005290!2.99e-08!3;UBERON:0010096!2.99e-08!3;UBERON:0000062!3.11e-08!511;UBERON:0000922!3.56e-08!612;UBERON:0002240!4.34e-08!3;UBERON:0006947!4.67e-08!3;UBERON:0004054!4.67e-08!3;UBERON:0002050!6.53e-08!605;UBERON:0005423!6.53e-08!605;UBERON:0006331!6.91e-08!3;UBERON:0005383!1.07e-07!3;UBERON:0005382!1.07e-07!3;UBERON:0000481!1.30e-07!347;UBERON:0000923!2.23e-07!604;UBERON:0005291!2.23e-07!604;UBERON:0006598!2.23e-07!604;UBERON:0002532!2.23e-07!604;UBERON:0000468!7.98e-07!659|ontology_enrichment_uberon_v019=UBERON:0002619;7.54e-83;22!UBERON:0001950;3.56e-75;20!UBERON:0000956;1.24e-72;25!UBERON:0000203;1.24e-72;25!UBERON:0001869;2.97e-65;32!UBERON:0003528;1.36e-63;34!UBERON:0002020;1.36e-63;34!UBERON:0002791;2.31e-59;32!UBERON:0001893;2.39e-59;34!UBERON:0002780;6.69e-42;41!UBERON:0001890;6.69e-42;41!UBERON:0000073;2.59e-37;53!UBERON:0002616;2.59e-37;53!UBERON:0001017;2.10e-27;75!UBERON:0000955;1.06e-26;68!UBERON:0000200;1.18e-24;6!UBERON:0002298;1.10e-22;6!UBERON:0001016;1.11e-21;83!UBERON:0001871;2.98e-21;6!UBERON:0001872;5.26e-21;5!UBERON:0002021;7.91e-21;5!UBERON:0000349;1.97e-20;5!UBERON:0001870;3.12e-13;3!UBERON:0000988;2.02e-12;3!UBERON:0001896;5.18e-12;3!UBERON:0005290;5.18e-12;3!UBERON:0004733;4.73e-11;12!UBERON:0002028;4.73e-11;12!UBERON:0007023;9.89e-11;114!UBERON:0004732;3.73e-10;13!UBERON:0011216;1.67e-09;132!UBERON:0002771;1.78e-09;2!UBERON:0002702;2.28e-09;2!UBERON:0001876;2.33e-09;2!UBERON:0001954;3.30e-09;2!UBERON:0003022;3.30e-09;2!UBERON:0002421;3.30e-09;2!UBERON:0002600;3.30e-09;2!UBERON:0002148;1.83e-08;2!UBERON:0006331;1.83e-08;2!UBERON:0009662;1.83e-08;2!UBERON:0002420;2.93e-07;9!UBERON:0007245;2.93e-07;9!UBERON:0010009;2.93e-07;9!UBERON:0010011;2.93e-07;9!UBERON:0000454;2.93e-07;9!UBERON:0000125;6.87e-07;9!UBERON:0002308;6.87e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002619,6.59e-83,22;UBERON:0001017,5.48e-77,81;UBERON:0001950,3.17e-75,20;UBERON:0001049,1.48e-74,56;UBERON:0005068,1.48e-74,56;UBERON:0006241,1.48e-74,56;UBERON:0007135,1.48e-74,56;UBERON:0003528,1.96e-73,34;UBERON:0002020,1.96e-73,34;UBERON:0000956,1.10e-72,25;UBERON:0000203,1.10e-72,25;UBERON:0001869,1.15e-72,32;UBERON:0000073,6.86e-70,53;UBERON:0002616,6.86e-70,53;UBERON:0001016,1.47e-68,89;UBERON:0001893,3.82e-68,34;UBERON:0002791,9.13e-67,32;UBERON:0000955,1.38e-63,68;UBERON:0006238,1.38e-63,68;UBERON:0002780,3.05e-60,41;UBERON:0001890,3.05e-60,41;UBERON:0003080,3.05e-60,41;UBERON:0006240,3.05e-60,41;UBERON:0003075,1.20e-48,82;UBERON:0007284,1.20e-48,82;UBERON:0002346,4.91e-46,86;UBERON:0003056,1.14e-38,61;UBERON:0010371,9.56e-37,104;UBERON:0007023,4.65e-35,114;UBERON:0004121,6.72e-32,171;UBERON:0000924,6.72e-32,171;UBERON:0006601,6.72e-32,171;UBERON:0010314,3.12e-29,132;UBERON:0011216,1.02e-26,223;UBERON:0000200,1.23e-24,6;UBERON:0002298,1.10e-22,6;UBERON:0001871,2.88e-21,6;UBERON:0001872,5.37e-21,5;UBERON:0002021,7.76e-21,5;UBERON:0000349,1.74e-20,5;UBERON:0000025,2.62e-16,192;UBERON:0003076,3.83e-15,15;UBERON:0003057,3.83e-15,15;UBERON:0004111,2.06e-13,240;UBERON:0001870,2.99e-13,3;UBERON:0000988,1.83e-12,3;UBERON:0001896,5.71e-12,3;UBERON:0005290,5.71e-12,3;UBERON:0010096,5.71e-12,3;UBERON:0004733,4.74e-11,12;UBERON:0002028,4.74e-11,12;UBERON:0007277,4.74e-11,12;UBERON:0004732,3.73e-10,13;UBERON:0002771,1.82e-09,2;UBERON:0001876,2.23e-09,2;UBERON:0002702,2.23e-09,2;UBERON:0001954,3.23e-09,2;UBERON:0003022,3.23e-09,2;UBERON:0002421,3.23e-09,2;UBERON:0002600,3.23e-09,2;UBERON:0002148,1.66e-08,2;UBERON:0006331,1.66e-08,2;UBERON:0009662,1.66e-08,2;UBERON:0000483,4.84e-08,306;UBERON:0000119,6.88e-08,309;UBERON:0002050,8.87e-08,564;UBERON:0002420,2.65e-07,9;UBERON:0007245,2.65e-07,9;UBERON:0010009,2.65e-07,9;UBERON:0010011,2.65e-07,9;UBERON:0000454,2.65e-07,9;UBERON:0005423,3.00e-07,581;UBERON:0000923,3.07e-07,560;UBERON:0010316,3.07e-07,560;UBERON:0005291,3.07e-07,560;UBERON:0006598,3.07e-07,560;UBERON:0010317,3.07e-07,560;UBERON:0002532,3.07e-07,560;UBERON:0000125,6.08e-07,9;UBERON:0002308,6.08e-07,9;UBERON:0000922,6.37e-07,592|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,2.60279707715243,1.54657762555539,8.37581326671744,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8127247285215,10.5502062307885,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,16.4786566836187,11.5960122702314,39.9227596002388,0,0,0,0,0,0,0,0,0.173624994933292,1.77148277162768,0.120596438625408,0,0.110579259931225,0.295547618953547,8.11725969469698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.468528891450678,0,0,0,1.57833761139756,0,41.6258955817467,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,17.6637120716902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,20.6759719350419,8.71701799114084,0,0,0,0,0,20.8978474903605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,2.19781025814636,1.85125642439766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3795681392407,38.6823259739223,12.769474932063,4.58727356552057,1.55300672151593,2.29756690883119,0,0.499921631848426,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86363306331141,31.1732467916287,7.82205909380041,17.0246582319827,45.3729053199093,10.8576886368822,10.0114900291748,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,12.0216900620742,21.8701867611877,13.0212681795746,10.3367770616068,61.8081534190588,0,0,0,0,0,0,0,0.227662191351298,0,0,0,29.0230759811071,13.8122824481983,0,0,0.078493092850514,0.785577949580009,0,2.73947616152849,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,2.9637093513365,0,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,3.04121302500737,0,0,0,0,0,0.0771741581079447,0,0,0,0,2.74831853960923,0.891139200981258,1.6906229103336,0,0,0,0,0,0,0,0,0,0.143339583151451,0,12.714408665701,40.1442635113147,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,1.65833887891756,0.20686599172379,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,2.03448089157869,0,0,0|short_description=p2@FAM19A1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=407738 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21587 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_uc003dne.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_FAM19A1_5end | |||
|id=chr3:68053424..68053452,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.54e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.09e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.97e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@FAM19A1 | |||
}} |
Revision as of 01:14, 13 September 2013
Short description: | p2@FAM19A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_FAM19A1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -1bp_to_uc003dne.2_5end |
EntrezGene: | FAM19A1 |
HGNC: | 21587 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.09e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.