FFCP PHASE1:Mm9::chr13:100204236..100204249,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100204236..100204249,-|id=chr13:100204236..100204249,-|ontology_enrichment_celltype=CL:0000117!1.36e-13!23;CL:0000337!1.36e-13!23;CL:0000540!3.84e-09!33;CL:0000047!3.84e-09!33;CL:0000031!3.84e-09!33;CL:0000404!3.84e-09!33;CL:0000393!2.53e-07!39;CL:0000211!2.53e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-28,23;CL:0000337,1.52e-28,23;CL:0000540,7.17e-19,33;CL:0000047,7.17e-19,33;CL:0000031,7.17e-19,33;CL:0000404,7.17e-19,33;CL:0000393,1.89e-15,39;CL:0000211,1.89e-15,39;CL:0002319,1.06e-13,43;CL:0000221,2.60e-13,44;CL:0000133,2.60e-13,44;CL:0002612,7.58e-10,3;CL:0002613,8.68e-09,3;CL:0002321,3.80e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.57e-23!71;UBERON:0003075!1.57e-23!71;UBERON:0007284!1.57e-23!71;UBERON:0001049!1.58e-20!52;UBERON:0005068!1.58e-20!52;UBERON:0006241!1.58e-20!52;UBERON:0007135!1.58e-20!52;UBERON:0002020!2.43e-20!34;UBERON:0003056!6.11e-20!49;UBERON:0000033!5.45e-19!63;UBERON:0002780!6.71e-18!39;UBERON:0001890!6.71e-18!39;UBERON:0006240!6.71e-18!39;UBERON:0000955!1.47e-17!50;UBERON:0006238!1.47e-17!50;UBERON:0004121!1.57e-17!102;UBERON:0000924!1.57e-17!102;UBERON:0006601!1.57e-17!102;UBERON:0002616!2.75e-17!49;UBERON:0003080!4.55e-17!40;UBERON:0000073!1.01e-16!75;UBERON:0001016!1.01e-16!75;UBERON:0001017!1.77e-16!73;UBERON:0005743!1.77e-16!73;UBERON:0002791!2.31e-16!29;UBERON:0003528!2.31e-16!29;UBERON:0001893!2.31e-16!29;UBERON:0000956!2.96e-12!21;UBERON:0001869!2.96e-12!21;UBERON:0000203!2.96e-12!21;UBERON:0002619!5.98e-10!17;UBERON:0007811!3.00e-09!86;UBERON:0000025!4.41e-09!114;UBERON:0002021!5.72e-09!10;UBERON:0000411!5.72e-09!10;UBERON:0001950!5.72e-09!10;UBERON:0004111!1.12e-07!122;UBERON:0000153!1.64e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.61e-41,34;UBERON:0000073,2.11e-32,54;UBERON:0003528,2.01e-29,29;UBERON:0002791,2.01e-29,29;UBERON:0001893,2.01e-29,29;UBERON:0001049,4.70e-28,52;UBERON:0005068,4.70e-28,52;UBERON:0006241,4.70e-28,52;UBERON:0007135,4.70e-28,52;UBERON:0002346,3.07e-26,64;UBERON:0003075,3.07e-26,64;UBERON:0007284,3.07e-26,64;UBERON:0001017,1.27e-24,73;UBERON:0001016,7.98e-24,75;UBERON:0010371,2.28e-22,73;UBERON:0004121,4.75e-21,95;UBERON:0000924,4.75e-21,95;UBERON:0006601,4.75e-21,95;UBERON:0002780,6.99e-21,39;UBERON:0001890,6.99e-21,39;UBERON:0006240,6.99e-21,39;UBERON:0003080,2.91e-20,40;UBERON:0003056,5.52e-20,49;UBERON:0002616,2.71e-19,46;UBERON:0002021,7.17e-19,10;UBERON:0000411,7.17e-19,10;UBERON:0001950,7.17e-19,10;UBERON:0000955,8.52e-19,47;UBERON:0006238,8.52e-19,47;UBERON:0000956,2.20e-18,21;UBERON:0001869,2.20e-18,21;UBERON:0000203,2.20e-18,21;UBERON:0010314,1.12e-16,92;UBERON:0002619,2.40e-16,17;UBERON:0001948,1.59e-14,5;UBERON:0002315,1.59e-14,5;UBERON:0002420,2.18e-12,8;UBERON:0007245,2.18e-12,8;UBERON:0010009,2.18e-12,8;UBERON:0010011,2.18e-12,8;UBERON:0000454,2.18e-12,8;UBERON:0002240,4.62e-12,6;UBERON:0005174,4.62e-12,6;UBERON:0001137,4.62e-12,6;UBERON:0000025,4.24e-10,114;UBERON:0002257,7.58e-10,3;UBERON:0000369,2.90e-09,5;UBERON:0002435,2.90e-09,5;UBERON:0000204,2.90e-09,5;UBERON:0010082,2.90e-09,5;UBERON:0004111,4.14e-09,122;UBERON:0003076,3.02e-08,12;UBERON:0003057,3.02e-08,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,0.528990979272033,0,0,0,0,0,0,0,0,1.97010263386108,1.35005938331691,0.420649922702764,1.71390590642282,1.32521124570968,1.22490799214954,0.766763768145891,0.919218786610021,0,4.72443150915195,4.76180253094355,1.45074916503213,1.55528994124096,2.08365348222704,0.837548997004143,1.68828783009504,2.75036845998258,6.18720029494702,4.41352210477219,1.67759501242771,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.705532242814229,0.125666591329675,0,0,0,0,0.883366073841574,0.484875253135222,0,0,0.83778682725382,0.255457055208591,0,0,0,0,0,3.64397621127307,0.869121600961382,2.30143911597297,0.62336413367868,0.973447578406546,0.712875546952214,0,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0,2.26057226753573,0.816437989815934,0.896796041993948,1.68663104207512,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.720248245844059,0,0.393528463494808,0.308534225774757,0.930135779001631,0.268273401399619,0.350296027101508,0.493679549740441,0.985004784474571,0,0,0,0,0.841159794256509,5.04232600658494,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0.898819408654221,0,0,0,0.456994050438915,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0,0.345369963731791,0.144649058581512,0,0,0,0,0.321101179975584,2.10981035865966,0,0,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0,0,0,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.900305470156551,0.258717367565509,0.214337035031592,0,0.891844088010353,0.493647061806363,0,0.469343416127421,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.432021363287205,0.627264888043406,0,0.539457385539283,0,0.26175594198403,0,0,0,0,0.165458490457098,0,0,0.337912250981556,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,7.34177395402186,5.52390283808612,4.01026859407578,4.98374228796694,0.685082519770642,2.2661816921691,0.675022500231806,2.2516060161211,1.81256963593682,3.10656187051092,0.726511433089237,0.399024873401031,0.512200817262403,0.243106717068294,0,0.551530525350042,0.666740183404846,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.512201219238954,0.34461281373368,0,0.579421629724277,0.38581844092741,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0.145346416632329,0,0.423073039458382,0.548783918618318,1.05227884575137,0.814824683075171,0,0.118635018124174,0.492522411877817,0.409231043169689,0,0,0.249810577937946,0,0,0.382576664137687,0,0|short_description=p@chr13:100204236..100204249,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:100204236..100204249,- | |||
|id=chr13:100204236..100204249,- | |||
|ontology_enrichment_celltype=CL:0000117!1.36e-13!23;CL:0000337!1.36e-13!23;CL:0000540!3.84e-09!33;CL:0000047!3.84e-09!33;CL:0000031!3.84e-09!33;CL:0000404!3.84e-09!33;CL:0000393!2.53e-07!39;CL:0000211!2.53e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-28,23;CL:0000337,1.52e-28,23;CL:0000540,7.17e-19,33;CL:0000047,7.17e-19,33;CL:0000031,7.17e-19,33;CL:0000404,7.17e-19,33;CL:0000393,1.89e-15,39;CL:0000211,1.89e-15,39;CL:0002319,1.06e-13,43;CL:0000221,2.60e-13,44;CL:0000133,2.60e-13,44;CL:0002612,7.58e-10,3;CL:0002613,8.68e-09,3;CL:0002321,3.80e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.57e-23!71;UBERON:0003075!1.57e-23!71;UBERON:0007284!1.57e-23!71;UBERON:0001049!1.58e-20!52;UBERON:0005068!1.58e-20!52;UBERON:0006241!1.58e-20!52;UBERON:0007135!1.58e-20!52;UBERON:0002020!2.43e-20!34;UBERON:0003056!6.11e-20!49;UBERON:0000033!5.45e-19!63;UBERON:0002780!6.71e-18!39;UBERON:0001890!6.71e-18!39;UBERON:0006240!6.71e-18!39;UBERON:0000955!1.47e-17!50;UBERON:0006238!1.47e-17!50;UBERON:0004121!1.57e-17!102;UBERON:0000924!1.57e-17!102;UBERON:0006601!1.57e-17!102;UBERON:0002616!2.75e-17!49;UBERON:0003080!4.55e-17!40;UBERON:0000073!1.01e-16!75;UBERON:0001016!1.01e-16!75;UBERON:0001017!1.77e-16!73;UBERON:0005743!1.77e-16!73;UBERON:0002791!2.31e-16!29;UBERON:0003528!2.31e-16!29;UBERON:0001893!2.31e-16!29;UBERON:0000956!2.96e-12!21;UBERON:0001869!2.96e-12!21;UBERON:0000203!2.96e-12!21;UBERON:0002619!5.98e-10!17;UBERON:0007811!3.00e-09!86;UBERON:0000025!4.41e-09!114;UBERON:0002021!5.72e-09!10;UBERON:0000411!5.72e-09!10;UBERON:0001950!5.72e-09!10;UBERON:0004111!1.12e-07!122;UBERON:0000153!1.64e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.61e-41,34;UBERON:0000073,2.11e-32,54;UBERON:0003528,2.01e-29,29;UBERON:0002791,2.01e-29,29;UBERON:0001893,2.01e-29,29;UBERON:0001049,4.70e-28,52;UBERON:0005068,4.70e-28,52;UBERON:0006241,4.70e-28,52;UBERON:0007135,4.70e-28,52;UBERON:0002346,3.07e-26,64;UBERON:0003075,3.07e-26,64;UBERON:0007284,3.07e-26,64;UBERON:0001017,1.27e-24,73;UBERON:0001016,7.98e-24,75;UBERON:0010371,2.28e-22,73;UBERON:0004121,4.75e-21,95;UBERON:0000924,4.75e-21,95;UBERON:0006601,4.75e-21,95;UBERON:0002780,6.99e-21,39;UBERON:0001890,6.99e-21,39;UBERON:0006240,6.99e-21,39;UBERON:0003080,2.91e-20,40;UBERON:0003056,5.52e-20,49;UBERON:0002616,2.71e-19,46;UBERON:0002021,7.17e-19,10;UBERON:0000411,7.17e-19,10;UBERON:0001950,7.17e-19,10;UBERON:0000955,8.52e-19,47;UBERON:0006238,8.52e-19,47;UBERON:0000956,2.20e-18,21;UBERON:0001869,2.20e-18,21;UBERON:0000203,2.20e-18,21;UBERON:0010314,1.12e-16,92;UBERON:0002619,2.40e-16,17;UBERON:0001948,1.59e-14,5;UBERON:0002315,1.59e-14,5;UBERON:0002420,2.18e-12,8;UBERON:0007245,2.18e-12,8;UBERON:0010009,2.18e-12,8;UBERON:0010011,2.18e-12,8;UBERON:0000454,2.18e-12,8;UBERON:0002240,4.62e-12,6;UBERON:0005174,4.62e-12,6;UBERON:0001137,4.62e-12,6;UBERON:0000025,4.24e-10,114;UBERON:0002257,7.58e-10,3;UBERON:0000369,2.90e-09,5;UBERON:0002435,2.90e-09,5;UBERON:0000204,2.90e-09,5;UBERON:0010082,2.90e-09,5;UBERON:0004111,4.14e-09,122;UBERON:0003076,3.02e-08,12;UBERON:0003057,3.02e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,0.528990979272033,0,0,0,0,0,0,0,0,1.97010263386108,1.35005938331691,0.420649922702764,1.71390590642282,1.32521124570968,1.22490799214954,0.766763768145891,0.919218786610021,0,4.72443150915195,4.76180253094355,1.45074916503213,1.55528994124096,2.08365348222704,0.837548997004143,1.68828783009504,2.75036845998258,6.18720029494702,4.41352210477219,1.67759501242771,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.705532242814229,0.125666591329675,0,0,0,0,0.883366073841574,0.484875253135222,0,0,0.83778682725382,0.255457055208591,0,0,0,0,0,3.64397621127307,0.869121600961382,2.30143911597297,0.62336413367868,0.973447578406546,0.712875546952214,0,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0,2.26057226753573,0.816437989815934,0.896796041993948,1.68663104207512,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.720248245844059,0,0.393528463494808,0.308534225774757,0.930135779001631,0.268273401399619,0.350296027101508,0.493679549740441,0.985004784474571,0,0,0,0,0.841159794256509,5.04232600658494,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0.898819408654221,0,0,0,0.456994050438915,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0,0.345369963731791,0.144649058581512,0,0,0,0,0.321101179975584,2.10981035865966,0,0,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0,0,0,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.900305470156551,0.258717367565509,0.214337035031592,0,0.891844088010353,0.493647061806363,0,0.469343416127421,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.432021363287205,0.627264888043406,0,0.539457385539283,0,0.26175594198403,0,0,0,0,0.165458490457098,0,0,0.337912250981556,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,7.34177395402186,5.52390283808612,4.01026859407578,4.98374228796694,0.685082519770642,2.2661816921691,0.675022500231806,2.2516060161211,1.81256963593682,3.10656187051092,0.726511433089237,0.399024873401031,0.512200817262403,0.243106717068294,0,0.551530525350042,0.666740183404846,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.512201219238954,0.34461281373368,0,0.579421629724277,0.38581844092741,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0.145346416632329,0,0.423073039458382,0.548783918618318,1.05227884575137,0.814824683075171,0,0.118635018124174,0.492522411877817,0.409231043169689,0,0,0.249810577937946,0,0,0.382576664137687,0,0 | |||
|short_description=p@chr13:100204236..100204249,- | |||
}} |
Revision as of 23:41, 12 September 2013
Short description: | p@chr13:100204236..100204249, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100204236..100204249, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.52e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-28 | 23 |
neuron | 7.17e-19 | 33 |
neuronal stem cell | 7.17e-19 | 33 |
neuroblast | 7.17e-19 | 33 |
electrically signaling cell | 7.17e-19 | 33 |
electrically responsive cell | 1.89e-15 | 39 |
electrically active cell | 1.89e-15 | 39 |
neural cell | 1.06e-13 | 43 |
ectodermal cell | 2.60e-13 | 44 |
neurectodermal cell | 2.60e-13 | 44 |
neuron of the ventral spinal cord | 7.58e-10 | 3 |
striatum neuron | 8.68e-09 | 3 |
embryonic cell | 3.80e-07 | 70 |
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