FFCP PHASE1:Mm9::chr12:86039719..86039769,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=627191|HGNC=|MCL_coexpression_id=90|UniProt=Q3USQ7,B2RRM8|association_with_transcript=0bp_to_ENSMUST00000095550,NM_001033334,uc007ofr.1,uc007ofs.1_5end|description=CAGE_peak_2_at_Tmem90a_5end|id=chr12:86039719..86039769,-|ontology_enrichment_celltype=CL:0000117!4.39e-17!23;CL:0000337!4.39e-17!23;CL:0000540!2.26e-14!33;CL:0000047!2.26e-14!33;CL:0000031!2.26e-14!33;CL:0000404!2.26e-14!33;CL:0000393!8.46e-11!39;CL:0000211!8.46e-11!39;CL:0002319!1.61e-10!43;CL:0000221!4.45e-10!44;CL:0000133!4.45e-10!44;CL:0000055!7.62e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.45e-14,23;CL:0000337,4.45e-14,23;CL:0000540,1.07e-10,33;CL:0000047,1.07e-10,33;CL:0000031,1.07e-10,33;CL:0000404,1.07e-10,33;CL:0002610,5.69e-09,3;CL:0000393,1.20e-08,39;CL:0000211,1.20e-08,39;CL:0002319,1.34e-07,43;CL:0000221,2.28e-07,44;CL:0000133,2.28e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.68e-22!73;UBERON:0005743!1.68e-22!73;UBERON:0000073!2.69e-22!75;UBERON:0001016!2.69e-22!75;UBERON:0001049!2.97e-21!52;UBERON:0005068!2.97e-21!52;UBERON:0006241!2.97e-21!52;UBERON:0007135!2.97e-21!52;UBERON:0002346!1.16e-20!71;UBERON:0003075!1.16e-20!71;UBERON:0007284!1.16e-20!71;UBERON:0000955!1.07e-19!50;UBERON:0006238!1.07e-19!50;UBERON:0000033!2.55e-19!63;UBERON:0002616!1.03e-18!49;UBERON:0004121!1.95e-18!102;UBERON:0000924!1.95e-18!102;UBERON:0006601!1.95e-18!102;UBERON:0003056!1.23e-15!49;UBERON:0002020!2.16e-15!34;UBERON:0003080!9.26e-14!40;UBERON:0002780!7.23e-13!39;UBERON:0001890!7.23e-13!39;UBERON:0006240!7.23e-13!39;UBERON:0002791!3.47e-11!29;UBERON:0003528!3.47e-11!29;UBERON:0001893!3.47e-11!29;UBERON:0007811!6.81e-11!86;UBERON:0000153!2.08e-09!94;UBERON:0003076!1.40e-08!12;UBERON:0003057!1.40e-08!12;UBERON:0002420!4.33e-08!8;UBERON:0007245!4.33e-08!8;UBERON:0010009!4.33e-08!8;UBERON:0010011!4.33e-08!8;UBERON:0000454!4.33e-08!8;UBERON:0002240!5.15e-07!6;UBERON:0005174!5.15e-07!6;UBERON:0001137!5.15e-07!6;UBERON:0002298!8.04e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.36e-26,54;UBERON:0001017,7.30e-26,73;UBERON:0001016,5.14e-25,75;UBERON:0001049,6.86e-23,52;UBERON:0005068,6.86e-23,52;UBERON:0006241,6.86e-23,52;UBERON:0007135,6.86e-23,52;UBERON:0004121,5.45e-20,95;UBERON:0000924,5.45e-20,95;UBERON:0006601,5.45e-20,95;UBERON:0002346,2.44e-19,64;UBERON:0003075,2.44e-19,64;UBERON:0007284,2.44e-19,64;UBERON:0003076,2.97e-17,12;UBERON:0003057,2.97e-17,12;UBERON:0000955,6.03e-17,47;UBERON:0006238,6.03e-17,47;UBERON:0010371,2.65e-16,73;UBERON:0002616,2.74e-15,46;UBERON:0002020,2.40e-12,34;UBERON:0010314,7.55e-12,92;UBERON:0002420,2.92e-11,8;UBERON:0007245,2.92e-11,8;UBERON:0010009,2.92e-11,8;UBERON:0010011,2.92e-11,8;UBERON:0000454,2.92e-11,8;UBERON:0002240,3.40e-11,6;UBERON:0005174,3.40e-11,6;UBERON:0001137,3.40e-11,6;UBERON:0003080,2.95e-10,40;UBERON:0003056,4.70e-09,49;UBERON:0001948,5.44e-09,5;UBERON:0002315,5.44e-09,5;UBERON:0004684,5.69e-09,3;UBERON:0002275,5.69e-09,3;UBERON:0002780,6.70e-09,39;UBERON:0001890,6.70e-09,39;UBERON:0006240,6.70e-09,39;UBERON:0000369,1.06e-08,5;UBERON:0002435,1.06e-08,5;UBERON:0000204,1.06e-08,5;UBERON:0010082,1.06e-08,5;UBERON:0004733,9.43e-08,6;UBERON:0004732,9.43e-08,6;UBERON:0002028,9.43e-08,6;UBERON:0007277,9.43e-08,6;UBERON:0000025,1.11e-07,114;UBERON:0003528,3.21e-07,29;UBERON:0002791,3.21e-07,29;UBERON:0001893,3.21e-07,29;UBERON:0004111,7.46e-07,122|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0.595745707205312,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.518448061542388,0.270011876663381,0.630974884054146,2.85650984403804,3.09215957332259,0.244981598429908,0.287536413054709,0.919218786610021,3.30347642998166,2.42605942361857,3.37934373163736,1.05509030184155,1.00636407962651,0.52091337055676,0.558365998002762,1.68828783009504,1.98637722109853,5.30331453852602,1.85083185038834,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,4.68449275218475,4.60782754989601,0,0,0,0,5.69204429738326,83.7226103158087,3.8952849154988,3.30266208365325,5.37002460393694,7.68815764870372,14.9261962022337,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0.748401490664606,0.512454881139399,0.749613796477831,1.03481348295606,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,2.10289948564127,1.3377599609307,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.8679856575427,0,0,0,0,0.646270193198397,0,0.445597348164788,0.283076530788832,0,0,1.18586333383957,5.78378369559253,0,0,0,0,0,0,0,0.754420319023592,1.47650946440386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| ||
|EntrezGene=627191 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|UniProt=Q3USQ7,B2RRM8 | |||
|association_with_transcript=0bp_to_ENSMUST00000095550,NM_001033334,uc007ofr.1,uc007ofs.1_5end | |||
|description=CAGE_peak_2_at_Tmem90a_5end | |||
|id=chr12:86039719..86039769,- | |||
|ontology_enrichment_celltype=CL:0000117!4.39e-17!23;CL:0000337!4.39e-17!23;CL:0000540!2.26e-14!33;CL:0000047!2.26e-14!33;CL:0000031!2.26e-14!33;CL:0000404!2.26e-14!33;CL:0000393!8.46e-11!39;CL:0000211!8.46e-11!39;CL:0002319!1.61e-10!43;CL:0000221!4.45e-10!44;CL:0000133!4.45e-10!44;CL:0000055!7.62e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.45e-14,23;CL:0000337,4.45e-14,23;CL:0000540,1.07e-10,33;CL:0000047,1.07e-10,33;CL:0000031,1.07e-10,33;CL:0000404,1.07e-10,33;CL:0002610,5.69e-09,3;CL:0000393,1.20e-08,39;CL:0000211,1.20e-08,39;CL:0002319,1.34e-07,43;CL:0000221,2.28e-07,44;CL:0000133,2.28e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.68e-22!73;UBERON:0005743!1.68e-22!73;UBERON:0000073!2.69e-22!75;UBERON:0001016!2.69e-22!75;UBERON:0001049!2.97e-21!52;UBERON:0005068!2.97e-21!52;UBERON:0006241!2.97e-21!52;UBERON:0007135!2.97e-21!52;UBERON:0002346!1.16e-20!71;UBERON:0003075!1.16e-20!71;UBERON:0007284!1.16e-20!71;UBERON:0000955!1.07e-19!50;UBERON:0006238!1.07e-19!50;UBERON:0000033!2.55e-19!63;UBERON:0002616!1.03e-18!49;UBERON:0004121!1.95e-18!102;UBERON:0000924!1.95e-18!102;UBERON:0006601!1.95e-18!102;UBERON:0003056!1.23e-15!49;UBERON:0002020!2.16e-15!34;UBERON:0003080!9.26e-14!40;UBERON:0002780!7.23e-13!39;UBERON:0001890!7.23e-13!39;UBERON:0006240!7.23e-13!39;UBERON:0002791!3.47e-11!29;UBERON:0003528!3.47e-11!29;UBERON:0001893!3.47e-11!29;UBERON:0007811!6.81e-11!86;UBERON:0000153!2.08e-09!94;UBERON:0003076!1.40e-08!12;UBERON:0003057!1.40e-08!12;UBERON:0002420!4.33e-08!8;UBERON:0007245!4.33e-08!8;UBERON:0010009!4.33e-08!8;UBERON:0010011!4.33e-08!8;UBERON:0000454!4.33e-08!8;UBERON:0002240!5.15e-07!6;UBERON:0005174!5.15e-07!6;UBERON:0001137!5.15e-07!6;UBERON:0002298!8.04e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.36e-26,54;UBERON:0001017,7.30e-26,73;UBERON:0001016,5.14e-25,75;UBERON:0001049,6.86e-23,52;UBERON:0005068,6.86e-23,52;UBERON:0006241,6.86e-23,52;UBERON:0007135,6.86e-23,52;UBERON:0004121,5.45e-20,95;UBERON:0000924,5.45e-20,95;UBERON:0006601,5.45e-20,95;UBERON:0002346,2.44e-19,64;UBERON:0003075,2.44e-19,64;UBERON:0007284,2.44e-19,64;UBERON:0003076,2.97e-17,12;UBERON:0003057,2.97e-17,12;UBERON:0000955,6.03e-17,47;UBERON:0006238,6.03e-17,47;UBERON:0010371,2.65e-16,73;UBERON:0002616,2.74e-15,46;UBERON:0002020,2.40e-12,34;UBERON:0010314,7.55e-12,92;UBERON:0002420,2.92e-11,8;UBERON:0007245,2.92e-11,8;UBERON:0010009,2.92e-11,8;UBERON:0010011,2.92e-11,8;UBERON:0000454,2.92e-11,8;UBERON:0002240,3.40e-11,6;UBERON:0005174,3.40e-11,6;UBERON:0001137,3.40e-11,6;UBERON:0003080,2.95e-10,40;UBERON:0003056,4.70e-09,49;UBERON:0001948,5.44e-09,5;UBERON:0002315,5.44e-09,5;UBERON:0004684,5.69e-09,3;UBERON:0002275,5.69e-09,3;UBERON:0002780,6.70e-09,39;UBERON:0001890,6.70e-09,39;UBERON:0006240,6.70e-09,39;UBERON:0000369,1.06e-08,5;UBERON:0002435,1.06e-08,5;UBERON:0000204,1.06e-08,5;UBERON:0010082,1.06e-08,5;UBERON:0004733,9.43e-08,6;UBERON:0004732,9.43e-08,6;UBERON:0002028,9.43e-08,6;UBERON:0007277,9.43e-08,6;UBERON:0000025,1.11e-07,114;UBERON:0003528,3.21e-07,29;UBERON:0002791,3.21e-07,29;UBERON:0001893,3.21e-07,29;UBERON:0004111,7.46e-07,122 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0.595745707205312,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.518448061542388,0.270011876663381,0.630974884054146,2.85650984403804,3.09215957332259,0.244981598429908,0.287536413054709,0.919218786610021,3.30347642998166,2.42605942361857,3.37934373163736,1.05509030184155,1.00636407962651,0.52091337055676,0.558365998002762,1.68828783009504,1.98637722109853,5.30331453852602,1.85083185038834,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,4.68449275218475,4.60782754989601,0,0,0,0,5.69204429738326,83.7226103158087,3.8952849154988,3.30266208365325,5.37002460393694,7.68815764870372,14.9261962022337,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0.748401490664606,0.512454881139399,0.749613796477831,1.03481348295606,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,2.10289948564127,1.3377599609307,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.8679856575427,0,0,0,0,0.646270193198397,0,0.445597348164788,0.283076530788832,0,0,1.18586333383957,5.78378369559253,0,0,0,0,0,0,0,0.754420319023592,1.47650946440386,0.307435147943927,0.775284879504663,0.363533729477506,0,0,0,0,1.36175842301515,0,0,0.428674070063185,0,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,1.12738587736838,0,0,0,0,0,0,0,0,0.724752362478018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0,0.572895513439397,0.68741272937475,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.37456602987953,0.0640251524048693,0.229741875822453,0,0.347652977834566,0.38581844092741,0,0,0.685738504770831,0,0,0.290692833264657,0.0941093804153306,0.676916863133412,0.365855945745545,0.263069711437843,0,0,0,0.29551344712669,0,0.619747364743864,0.192906610981141,0.749431733813838,0.233931608445408,0.644613162144895,0,0,0.231867835620421 | |||
|short_description=p2@Tmem90a | |||
}} |
Revision as of 23:28, 12 September 2013
Short description: | p2@Tmem90a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmem90a_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | 0bp_to_ENSMUST00000095550, NM_001033334, uc007ofr.1, uc007ofs.1_5end |
EntrezGene: | Tmem90a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.45e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.45e-14 | 23 |
neuron | 1.07e-10 | 33 |
neuronal stem cell | 1.07e-10 | 33 |
neuroblast | 1.07e-10 | 33 |
electrically signaling cell | 1.07e-10 | 33 |
raphe nuclei neuron | 5.69e-09 | 3 |
electrically responsive cell | 1.20e-08 | 39 |
electrically active cell | 1.20e-08 | 39 |
neural cell | 1.34e-07 | 43 |
ectodermal cell | 2.28e-07 | 44 |
neurectodermal cell | 2.28e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.