FFCP PHASE1:Mm9::chr11:53520771..53520834,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19360|HGNC=|MCL_coexpression_id=364|UniProt=Q5SV02,E9QPC6,P70388,A8Y5I3,E9PUJ2,Q3UNL2|association_with_transcript=0bp_to_ENSMUST00000020649,ENSMUST00000102756,ENSMUST00000108933,ENSMUST00000124352,ENSMUST00000128483,NM_009012,uc007iwt.1,uc007iwu.1,uc011xur.1,uc011xus.1_5end|description=CAGE_peak_1_at_Rad50_5end|id=chr11:53520771..53520834,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.44e-13!193;UBERON:0004120!1.44e-13!193;UBERON:0006603!1.44e-13!193;UBERON:0004177!1.29e-11!29;UBERON:0002193!1.58e-10!48;UBERON:0002390!2.10e-10!45;UBERON:0003061!2.10e-10!45;UBERON:0000065!2.33e-09!41;UBERON:0001004!3.32e-09!42;UBERON:0001048!3.46e-09!147;UBERON:0003104!1.17e-08!131;UBERON:0009142!1.17e-08!131;UBERON:0002370!2.12e-08!23;UBERON:0000974!2.12e-08!23;UBERON:0004807!2.12e-08!23;UBERON:0005058!2.12e-08!23;UBERON:0003351!2.12e-08!23;UBERON:0009113!2.12e-08!23;UBERON:0003295!2.12e-08!23;UBERON:0009722!2.12e-08!23;UBERON:0005562!2.12e-08!23;UBERON:0007690!2.12e-08!23;UBERON:0003081!2.18e-08!88;UBERON:0003408!3.81e-08!24;UBERON:0004921!3.92e-08!126;UBERON:0004185!3.92e-08!126;UBERON:0001041!4.40e-08!92;UBERON:0002405!5.04e-08!70;UBERON:0006562!5.30e-08!24;UBERON:0001557!5.30e-08!24;UBERON:0001042!5.30e-08!24;UBERON:0008814!5.30e-08!24;UBERON:0009145!5.30e-08!24;UBERON:0001007!5.35e-08!128;UBERON:0001555!5.35e-08!128;UBERON:0007026!5.35e-08!128;UBERON:0000077!5.64e-08!97;UBERON:0000072!5.71e-08!27;UBERON:0004119!1.09e-07!130;UBERON:0000925!1.09e-07!130;UBERON:0006595!1.09e-07!130;UBERON:0005057!1.53e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.29e-11,29;UBERON:0005057,1.29e-11,29;UBERON:0000926,4.13e-11,120;UBERON:0004120,4.13e-11,120;UBERON:0006603,4.13e-11,120;UBERON:0002193,1.58e-10,48;UBERON:0002405,1.58e-10,48;UBERON:0002390,2.10e-10,45;UBERON:0003061,2.10e-10,45;UBERON:0000077,3.69e-10,35;UBERON:0001048,8.90e-10,134;UBERON:0001041,1.22e-09,80;UBERON:0000065,2.33e-09,41;UBERON:0004921,2.86e-09,114;UBERON:0001004,3.32e-09,42;UBERON:0001007,4.21e-09,116;UBERON:0001555,4.21e-09,116;UBERON:0007026,4.21e-09,116;UBERON:0004119,9.59e-09,118;UBERON:0000925,9.59e-09,118;UBERON:0006595,9.59e-09,118;UBERON:0002370,2.12e-08,23;UBERON:0000974,2.12e-08,23;UBERON:0004807,2.12e-08,23;UBERON:0005058,2.12e-08,23;UBERON:0003351,2.12e-08,23;UBERON:0009113,2.12e-08,23;UBERON:0003295,2.12e-08,23;UBERON:0009722,2.12e-08,23;UBERON:0005562,2.12e-08,23;UBERON:0007690,2.12e-08,23;UBERON:0003408,3.81e-08,24;UBERON:0006562,5.30e-08,24;UBERON:0001557,5.30e-08,24;UBERON:0001042,5.30e-08,24;UBERON:0008814,5.30e-08,24;UBERON:0009145,5.30e-08,24;UBERON:0000072,5.71e-08,27;UBERON:0003081,6.18e-08,87|phase1_expression=9.28863313207805,10.8182376368202,7.27998783023258,7.25914107136392,6.01074875935617,12.9267039372155,8.87728034262997,18.7228818990286,13.51571732656,7.0219357896598,14.5535272991679,13.3219505522212,19.3456824822262,14.7740480088106,24.650122374359,19.2351504020335,32.1798463938947,23.9751245672261,24.9548269162445,22.9170411970936,9.52484849691981,22.4397549714001,17.5003858723087,11.6794468639187,11.9292826154928,7.46501553349526,8.61523992318149,11.2045040996662,9.12112413390595,16.6339885641554,7.76056787293567,13.9706748161119,14.7615549020297,0,16.1756907060714,19.7819227976606,16.1293791447272,7.11503772252743,8.5946887897618,13.088093599345,6.47054636834116,9.56263678941824,10.1957174136542,16.1147927008739,13.3817549209759,13.9495531642878,4.69434806608824,2.8343270329458,1.5378032791413,1.74986909166855,3.21968769738334,0,15.1004345451963,7.25362142011344,13.1076581665561,9.00408026125814,11.747871037489,11.3447860301037,3.43937983461316,5.28990979272033,0.633831403506179,4.74382344896785,2.66788438833342,6.74924787961049,3.9554654502679,3.5524005747305,3.29560121570245,2.68952813725088,7.46565208621039,5.8052553482627,4.6271491497304,2.85650984403804,2.20868540951614,5.63457676388789,4.2172007248024,6.43453150627015,6.60695285996332,5.87361755191863,6.45147439676223,3.29715719325485,2.37867873366265,3.12548022334056,2.79182999001381,2.8138130501584,5.65353516774197,5.89257170947335,6.12198227436143,5.77838282058432,6.6639050133202,10.7311615351635,11.5945795480671,6.0229671388697,5.439770669662,9.71465744948071,3.89865850468601,5.82434953226536,8.00533194750986,12.1005529030421,6.49465011507172,7.77347063922748,9.01397886570755,8.98285341900225,28.028576367731,14.2213340630666,12.9894624606728,15.454951793981,13.6491600153991,6.16592950482924,41.6889992671946,13.6566767939639,14.7462527751215,10.3518262626128,14.7593918243877,16.4287678202359,17.52071736322,13.6976584549346,7.91023896749996,10.1219549843938,14.153768831198,11.3236794963186,17.4464799583711,13.5765070877862,20.5030937339934,8.49064311333487,7.74952815209784,11.240110429178,17.8524535513821,15.5974710058286,15.2484272487678,4.79330046095433,5.03250663100489,7.03664371832041,8.34356736922927,8.69432554923124,3.94797284663164,5.84068547043927,15.6832620329487,16.7949410323626,14.1524744722858,9.6803253707778,14.8337304977482,10.3455946995063,13.6847218652065,14.6183673300644,16.0566137997134,17.4234659587396,12.5560310910037,7.76110112217047,12.0718076042392,17.3977593754394,16.1875034230833,11.1789823538063,20.8535436919198,12.537077994798,16.2567887762275,19.1072896145753,24.5774615559632,16.9849618695712,16.4814829649444,10.7705401718461,17.3549284386011,10.0834754418168,12.5474709860161,17.7087808572663,14.9639099500757,10.6965614585188,13.9502168727802,10.8591768401468,14.8103864922132,12.9692296622485,8.91756905004413,7.89479932096795,8.34290438105992,9.5286557319864,8.20130799400096,9.46722433889417,3.96502539580558,9.25576983322405,18.9826542976358,14.8631469990681,16.2373001265838,16.5380490191141,14.6769508937614,12.7451169495415,11.8632265386128,12.0230236948528,16.8394589896181,12.3353012665514,16.3769833180061,10.7858329038507,16.2103537406021,12.3467589417708,5.12103332573321,14.9665551518745,23.6686244913469,12.8300336542548,12.8008641530633,13.3959415990508,14.4811670014549,10.9231509504906,11.6179058602617,9.00799296629144,7.70776830426587,18.1861165230543,15.3316016188298,16.1900720917095,12.1716072833102,16.8824011826692,11.4581633301639,10.64475708568,12.9708181420028,14.0026320725922,27.3159592401974,14.1413560114031,17.1620720213008,16.6702059445094,12.9166137735777,4.82443521363367,9.60716588866344,14.0223644710159,18.903937267275,20.1996652072474,21.1221223459652,16.7506257441816,12.3782693260727,13.6593553500459,16.2364198429377,15.9454576547118,15.3076577911188,13.2729284919748,15.0235934223329,12.0058718622655,10.5553898757491,12.5098307278303,12.2941068254759,12.417153583713,5.77982123956051,4.80567915028033,10.1639666133539,8.07906967053994,16.7219356290616,14.8366722832723,12.0637102730367,12.1874086955802,15.3731085116852,15.5692091933858,17.0020494703456,10.5212108848072,13.8350722281283,8.35435422696698,17.1747503102005,11.7523298420388,18.2433394476005,15.8371318053634,7.96470830039777,8.74010290157933,14.8138542912728,8.86443874852721,6.79194353625777,9.22305443831782,14.2135561242522,13.8142817201452,17.4683715408513,16.4339114126624,6.32511651449993,9.28219889233682,5.10659408630682,12.6042765821917,5.82114077022395,10.7168517515796,11.1724347194632,8.20496560969525,9.70839221552514,4.26250928760439,11.0295702789944,9.74427525973573,11.9085334949679,22.2596441470998,18.2454802166373,17.792312853806,16.9508728484454,17.5630762727216,10.7847909553045,8.52956389248344,19.4792804109552,18.1620443807636,21.6677597022563,29.7622162067412,27.6122339996471,25.6231553991305,16.1479508494163,18.7534946113702,12.9907975376158,4.77335309007557,13.6024477239888,18.0954325742895,13.1766515802598,17.1452402731864,19.8709933009022,10.2496903252464,13.9684340175818,12.5642852152334,14.6464919819726,12.4267862617385,5.6369293868419,22.5769984526408,19.6895603643946,18.4728628926845,17.307416346016,14.8681390431885,16.3126561717598,29.0355778202009,26.843992172982,14.0118790079084,9.79302021276743,21.1727450820879,18.4479945914049,22.6991215334268,27.1534520023592,26.4959509587873,24.8351693476581,27.043976141993,24.811840565329,29.4822033848591,28.5775524956249,27.2230699869469,25.1441332308561,27.6127985507746,25.0116570668558,11.3365191807606,13.763129109192,15.7896387632677,13.5986539254904,14.8755987404787,11.8239959534245,15.5678880627175,16.0776284309299,13.0408747049194,5.64751842617067,4.60325236507177,5.72895513439397,7.04598047609119,4.7955776383945,8.3093328712867,11.4753825039407,6.75481804836331,8.15656336171568,8.28416498802912,11.2090335390911,12.768795948833,12.9757540373142,15.3157231753025,12.157563432423,11.2144540154509,11.7790765734856,13.8043488350059,13.1576875932644,10.3605856823157,11.1530891951705,12.260712190095,14.8889996877113,12.8050304809739,12.6932386391905,10.9547548995107,12.6313915279892,14.4681915347779,13.1867488257058,12.5119082114238,13.3719008430312,10.4710725634009,12.3986818772607,10.0289027476307,11.0107975085937,13.7075664784516,10.7927503994936,11.3119975918272,11.4075455630524,11.2228454331548,11.8635018124174,13.0025916735744,10.2307760792422,11.6202630889474,14.2750892126045,8.24374907195222,10.9947855969342,10.3138105943183,11.2860115920618,10.3677966986172,8.81097775357602|short_description=p1@Rad50}} | ||
|EntrezGene=19360 | |||
|HGNC= | |||
|MCL_coexpression_id=364 | |||
|UniProt=Q5SV02,E9QPC6,P70388,A8Y5I3,E9PUJ2,Q3UNL2 | |||
|association_with_transcript=0bp_to_ENSMUST00000020649,ENSMUST00000102756,ENSMUST00000108933,ENSMUST00000124352,ENSMUST00000128483,NM_009012,uc007iwt.1,uc007iwu.1,uc011xur.1,uc011xus.1_5end | |||
|description=CAGE_peak_1_at_Rad50_5end | |||
|id=chr11:53520771..53520834,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.44e-13!193;UBERON:0004120!1.44e-13!193;UBERON:0006603!1.44e-13!193;UBERON:0004177!1.29e-11!29;UBERON:0002193!1.58e-10!48;UBERON:0002390!2.10e-10!45;UBERON:0003061!2.10e-10!45;UBERON:0000065!2.33e-09!41;UBERON:0001004!3.32e-09!42;UBERON:0001048!3.46e-09!147;UBERON:0003104!1.17e-08!131;UBERON:0009142!1.17e-08!131;UBERON:0002370!2.12e-08!23;UBERON:0000974!2.12e-08!23;UBERON:0004807!2.12e-08!23;UBERON:0005058!2.12e-08!23;UBERON:0003351!2.12e-08!23;UBERON:0009113!2.12e-08!23;UBERON:0003295!2.12e-08!23;UBERON:0009722!2.12e-08!23;UBERON:0005562!2.12e-08!23;UBERON:0007690!2.12e-08!23;UBERON:0003081!2.18e-08!88;UBERON:0003408!3.81e-08!24;UBERON:0004921!3.92e-08!126;UBERON:0004185!3.92e-08!126;UBERON:0001041!4.40e-08!92;UBERON:0002405!5.04e-08!70;UBERON:0006562!5.30e-08!24;UBERON:0001557!5.30e-08!24;UBERON:0001042!5.30e-08!24;UBERON:0008814!5.30e-08!24;UBERON:0009145!5.30e-08!24;UBERON:0001007!5.35e-08!128;UBERON:0001555!5.35e-08!128;UBERON:0007026!5.35e-08!128;UBERON:0000077!5.64e-08!97;UBERON:0000072!5.71e-08!27;UBERON:0004119!1.09e-07!130;UBERON:0000925!1.09e-07!130;UBERON:0006595!1.09e-07!130;UBERON:0005057!1.53e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.29e-11,29;UBERON:0005057,1.29e-11,29;UBERON:0000926,4.13e-11,120;UBERON:0004120,4.13e-11,120;UBERON:0006603,4.13e-11,120;UBERON:0002193,1.58e-10,48;UBERON:0002405,1.58e-10,48;UBERON:0002390,2.10e-10,45;UBERON:0003061,2.10e-10,45;UBERON:0000077,3.69e-10,35;UBERON:0001048,8.90e-10,134;UBERON:0001041,1.22e-09,80;UBERON:0000065,2.33e-09,41;UBERON:0004921,2.86e-09,114;UBERON:0001004,3.32e-09,42;UBERON:0001007,4.21e-09,116;UBERON:0001555,4.21e-09,116;UBERON:0007026,4.21e-09,116;UBERON:0004119,9.59e-09,118;UBERON:0000925,9.59e-09,118;UBERON:0006595,9.59e-09,118;UBERON:0002370,2.12e-08,23;UBERON:0000974,2.12e-08,23;UBERON:0004807,2.12e-08,23;UBERON:0005058,2.12e-08,23;UBERON:0003351,2.12e-08,23;UBERON:0009113,2.12e-08,23;UBERON:0003295,2.12e-08,23;UBERON:0009722,2.12e-08,23;UBERON:0005562,2.12e-08,23;UBERON:0007690,2.12e-08,23;UBERON:0003408,3.81e-08,24;UBERON:0006562,5.30e-08,24;UBERON:0001557,5.30e-08,24;UBERON:0001042,5.30e-08,24;UBERON:0008814,5.30e-08,24;UBERON:0009145,5.30e-08,24;UBERON:0000072,5.71e-08,27;UBERON:0003081,6.18e-08,87 | |||
|phase1_expression=9.28863313207805,10.8182376368202,7.27998783023258,7.25914107136392,6.01074875935617,12.9267039372155,8.87728034262997,18.7228818990286,13.51571732656,7.0219357896598,14.5535272991679,13.3219505522212,19.3456824822262,14.7740480088106,24.650122374359,19.2351504020335,32.1798463938947,23.9751245672261,24.9548269162445,22.9170411970936,9.52484849691981,22.4397549714001,17.5003858723087,11.6794468639187,11.9292826154928,7.46501553349526,8.61523992318149,11.2045040996662,9.12112413390595,16.6339885641554,7.76056787293567,13.9706748161119,14.7615549020297,0,16.1756907060714,19.7819227976606,16.1293791447272,7.11503772252743,8.5946887897618,13.088093599345,6.47054636834116,9.56263678941824,10.1957174136542,16.1147927008739,13.3817549209759,13.9495531642878,4.69434806608824,2.8343270329458,1.5378032791413,1.74986909166855,3.21968769738334,0,15.1004345451963,7.25362142011344,13.1076581665561,9.00408026125814,11.747871037489,11.3447860301037,3.43937983461316,5.28990979272033,0.633831403506179,4.74382344896785,2.66788438833342,6.74924787961049,3.9554654502679,3.5524005747305,3.29560121570245,2.68952813725088,7.46565208621039,5.8052553482627,4.6271491497304,2.85650984403804,2.20868540951614,5.63457676388789,4.2172007248024,6.43453150627015,6.60695285996332,5.87361755191863,6.45147439676223,3.29715719325485,2.37867873366265,3.12548022334056,2.79182999001381,2.8138130501584,5.65353516774197,5.89257170947335,6.12198227436143,5.77838282058432,6.6639050133202,10.7311615351635,11.5945795480671,6.0229671388697,5.439770669662,9.71465744948071,3.89865850468601,5.82434953226536,8.00533194750986,12.1005529030421,6.49465011507172,7.77347063922748,9.01397886570755,8.98285341900225,28.028576367731,14.2213340630666,12.9894624606728,15.454951793981,13.6491600153991,6.16592950482924,41.6889992671946,13.6566767939639,14.7462527751215,10.3518262626128,14.7593918243877,16.4287678202359,17.52071736322,13.6976584549346,7.91023896749996,10.1219549843938,14.153768831198,11.3236794963186,17.4464799583711,13.5765070877862,20.5030937339934,8.49064311333487,7.74952815209784,11.240110429178,17.8524535513821,15.5974710058286,15.2484272487678,4.79330046095433,5.03250663100489,7.03664371832041,8.34356736922927,8.69432554923124,3.94797284663164,5.84068547043927,15.6832620329487,16.7949410323626,14.1524744722858,9.6803253707778,14.8337304977482,10.3455946995063,13.6847218652065,14.6183673300644,16.0566137997134,17.4234659587396,12.5560310910037,7.76110112217047,12.0718076042392,17.3977593754394,16.1875034230833,11.1789823538063,20.8535436919198,12.537077994798,16.2567887762275,19.1072896145753,24.5774615559632,16.9849618695712,16.4814829649444,10.7705401718461,17.3549284386011,10.0834754418168,12.5474709860161,17.7087808572663,14.9639099500757,10.6965614585188,13.9502168727802,10.8591768401468,14.8103864922132,12.9692296622485,8.91756905004413,7.89479932096795,8.34290438105992,9.5286557319864,8.20130799400096,9.46722433889417,3.96502539580558,9.25576983322405,18.9826542976358,14.8631469990681,16.2373001265838,16.5380490191141,14.6769508937614,12.7451169495415,11.8632265386128,12.0230236948528,16.8394589896181,12.3353012665514,16.3769833180061,10.7858329038507,16.2103537406021,12.3467589417708,5.12103332573321,14.9665551518745,23.6686244913469,12.8300336542548,12.8008641530633,13.3959415990508,14.4811670014549,10.9231509504906,11.6179058602617,9.00799296629144,7.70776830426587,18.1861165230543,15.3316016188298,16.1900720917095,12.1716072833102,16.8824011826692,11.4581633301639,10.64475708568,12.9708181420028,14.0026320725922,27.3159592401974,14.1413560114031,17.1620720213008,16.6702059445094,12.9166137735777,4.82443521363367,9.60716588866344,14.0223644710159,18.903937267275,20.1996652072474,21.1221223459652,16.7506257441816,12.3782693260727,13.6593553500459,16.2364198429377,15.9454576547118,15.3076577911188,13.2729284919748,15.0235934223329,12.0058718622655,10.5553898757491,12.5098307278303,12.2941068254759,12.417153583713,5.77982123956051,4.80567915028033,10.1639666133539,8.07906967053994,16.7219356290616,14.8366722832723,12.0637102730367,12.1874086955802,15.3731085116852,15.5692091933858,17.0020494703456,10.5212108848072,13.8350722281283,8.35435422696698,17.1747503102005,11.7523298420388,18.2433394476005,15.8371318053634,7.96470830039777,8.74010290157933,14.8138542912728,8.86443874852721,6.79194353625777,9.22305443831782,14.2135561242522,13.8142817201452,17.4683715408513,16.4339114126624,6.32511651449993,9.28219889233682,5.10659408630682,12.6042765821917,5.82114077022395,10.7168517515796,11.1724347194632,8.20496560969525,9.70839221552514,4.26250928760439,11.0295702789944,9.74427525973573,11.9085334949679,22.2596441470998,18.2454802166373,17.792312853806,16.9508728484454,17.5630762727216,10.7847909553045,8.52956389248344,19.4792804109552,18.1620443807636,21.6677597022563,29.7622162067412,27.6122339996471,25.6231553991305,16.1479508494163,18.7534946113702,12.9907975376158,4.77335309007557,13.6024477239888,18.0954325742895,13.17665158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| |||
|short_description=p1@Rad50 | |||
}} |
Revision as of 19:57, 12 September 2013
Short description: | p1@Rad50 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rad50_5end |
Coexpression cluster: | MCL_coexpression_mm9:364 |
Association with transcript: | 0bp_to_ENSMUST00000020649, ENSMUST00000102756, ENSMUST00000108933, ENSMUST00000124352, ENSMUST00000128483, NM_009012, uc007iwt.1, uc007iwu.1, uc011xur.1, uc011xus.1_5end |
EntrezGene: | Rad50 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.